Leucoraja erinaceus (little skate): 129698376
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Entry
129698376 CDS
T09122
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129698376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leri02000
]
129698376
Transporters [BR:
leri02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
129698376
SSDB
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Paralog
GFIT
Motif
Pfam:
SSF
U83
Motif
Other DBs
NCBI-GeneID:
129698376
NCBI-ProteinID:
XP_055493467
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Position
6:complement(84639807..84660628)
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AA seq
482 aa
AA seq
DB search
MSSGCGPTLLAVLPPAATWVGGAYINGTAEMVYRPDAGLVWTVAPWTTLLCLFIGGLFFA
KKMRQHKYVTMLDPFQQQYGNRIASLIFIPAVIGEIFWSAAILAALGTTSSVMLDLDRNL
SMAISASVAMLYTLLGGLYSVAYTDIVQLGCIFFGLWLCVPFTMLNHAVTSIKITAIEEV
HQKPWLGKIDEIFIGKWIDDLLLMVLGGIPWQAYFQRVLASSSVKSAQILSIAGAFGGCI
MGIPSVLIGSVAASTDWNQTSYGSTSPFEKGEAAMILPIVLRHLCPPYISLFGTGAIAAA
VMSSTDSSLLSSSSMFTHNIYRRILRPKASDREVMYVMKSTVLVVTVLATVLALFTSTIY
GLYALSADIVYVVIFPQLVCVLYAPCVNRFGFVTGVLTGALLRMAGGEPLFDLPPLIYYP
GGHFQDDYYVQTFPHKTFAMLFSLIITVVLSHISKLKWPEVFVTTLTMTGMPMEVIATDV
LH
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctggctgtggtccaacactattggctgtgcttccccctgcagctacttgggtt
ggtggagcctacatcaacggcacggctgagatggtctaccggccggacgccggcctggtg
tggaccgtcgccccttggaccaccctcctctgcctcttcatcgggggattgttttttgcc
aagaagatgcggcaacacaagtacgtgaccatgttggatccctttcaacaacagtacggc
aaccgcatcgccagcctgatcttcatcccagctgtaatcggggaaatattctggtcagcc
gctatcctggctgccttaggtacaacgtccagtgtgatgcttgatctcgataggaatcta
tccatggcgatctcggccagtgtggcaatgctctacacactgcttgggggcctgtattcc
gttgcatacaccgacattgtccagttaggatgcatcttctttggtttgtggctttgtgtg
ccattcacaatgctgaatcatgctgttacaagcatcaagatcacagccattgaggaggtc
catcaaaagccctggctgggaaaaatcgatgagatatttattggaaagtggatagatgat
cttttgctgatggtgctgggcgggattccgtggcaagcttattttcaacgagtgctggct
tcatcctctgtgaaaagtgctcagatactatcaattgcgggagcgtttggtggatgtatc
atgggcattccctctgtactgattggttcagtcgccgcttctacagactggaatcaaacg
tcgtatgggtccacgtcacctttcgagaagggagaggctgccatgatcttgcccatcgtc
cttcgccacctgtgtcctccctacatctccctgtttgggaccggtgccattgctgctgcc
gtcatgtcttccactgactcctccctcctctcgtccagttccatgttcacccacaatatc
taccgcaggattctccgaccaaaggcatcagaccgggaagtgatgtacgtgatgaagagt
acggtccttgtggtgacggtccttgccactgtccttgccctcttcaccagcaccatctac
ggcctgtacgcgctgagcgccgacattgtgtacgttgtcattttcccccagctggtgtgc
gtgctgtacgctccctgcgtgaacaggttcggttttgtcactggcgttctgacgggggca
ttgctgaggatggccggtggggagccactgtttgacctcccacctctcatctactatccc
gggggtcacttccaagatgactactatgtccagactttcccccacaagacgtttgcaatg
cttttctctctcatcataaccgttgtcttgtcacatatcagcaaacttaagtggccagag
gtgtttgtaacaacgctgacaatgacaggaatgccaatggaggtgatagccactgatgtg
ttacattaa
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