Leucoraja erinaceus (little skate): 129698404
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Entry
129698404 CDS
T09122
Symbol
gdpd5b
Name
(RefSeq) glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1
KO
K28873
glycerophosphocholine phosphodiesterase [EC:
3.1.4.2
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
129698404 (gdpd5b)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
129698404 (gdpd5b)
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Motif
Pfam:
GDPD
GDPD_2
Motif
Other DBs
NCBI-GeneID:
129698404
NCBI-ProteinID:
XP_055493526
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All DBs
Position
6:87444787..87612163
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AA seq
586 aa
AA seq
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MIKHQPLQYYEPQLCLSFLTGIYGCRWKRYQRSHDSTTKWEQLWFLILSVTFFLSVTWFY
FWWEVHNDYNEFNWYMYKRKGYWSDWSVPVLALAGAGFTYVTFLQILALCHITVGQQMNL
YWMHKVALMMVLITLLIAMASVNQMWKEEWDIILISFQATAPFLHIGAVAVVTLLAWLVA
GQFARSERIVFQALFLILYMGVLLALYLLPLVIYSPCIMNREDLGPRPNIIGNRGAPMLA
PENTLMSFQRAVEERADGFFVNVTISYDGVAFVMHDTTLRRTTNVEEVFRDRALDNAANF
NWTDLKELNAGRWFYQEDPFWTVRELSGKEMEEALNQSLCRLADVLQLAVRRNLSVMVDL
CRPPAGHPYRSTWLNVTLDAIFHSGIPHQLVKWLPGAERWLVRHIAPSFQQVSSLKLNAT
ELRSQGFAGLNLRYNRINADQMRDYASRNISTNVYLVNEPWLLSVLWCAGVQSVTSDACQ
LLSKVQSPNWMMQPDEYLTLWVASDIISVTIVVGIFILQNYHLIRYRLGSMRSYNPEQIM
LSAAVRRSSRDVNIMKEKLIFSEINNGLAGSDDGSLCSESAVLTAT
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaccagccacttcagtactacgagccacagctctgcctgtcctttctcacc
gggatctacgggtgccgttggaagcgataccagcgttcccatgacagcaccaccaagtgg
gagcagctgtggttcctcatcctctccgtcacgttcttcctctcggtgacgtggttctac
ttctggtgggaggtccacaatgattacaatgagttcaactggtacatgtacaagaggaaa
ggatactggagcgactggtcggttccagttttggcgctggctggagcagggtttacgtac
gtcacgtttttacagattttagcactatgtcacataactgtgggacaacagatgaacctg
tactggatgcacaaggttgcactgatgatggtcttgatcaccctgctcattgccatggct
tctgtcaaccagatgtggaaggaggaatgggacatcatcctcatctcgtttcaagccacc
gcgccgtttttgcacattggcgccgttgctgtggttacactgctggcatggctggtcgcc
gggcagtttgcccggtctgagagaatcgttttccaggcactgttcctcatcctgtacatg
ggggtgctactggctctctacctcctcccgctggtcatctactctccctgcatcatgaac
agggaggatctcggcccaagaccgaacatcatcgggaaccgaggagcccccatgctcgcc
ccagagaacacgctgatgtccttccagagggcggtggaggagcgcgccgacggcttcttt
gtcaacgtgaccatcagttacgacggggttgcgtttgtcatgcacgacaccacgctgcgg
aggaccaccaacgtggaggaggtcttccgcgaccgagccttggacaacgccgccaacttc
aactggacagacctgaaggagctcaacgctggccgctggttctatcaggaagatccgttc
tggacggtgagggagttgtcggggaaggagatggaggaggccctgaaccagtcgctgtgc
cggctggcggacgtgctgcagctggcggtgcggcggaacctgtcggtcatggtggacctg
tgtcgcccgcctgccgggcacccctaccgctccacctggctcaacgtcaccctggatgcc
atcttccactcgggcatcccccaccagctggtgaagtggctgccgggagcggagaggtgg
ctggttcgacacatcgccccgagtttccagcaggtttcctcgctcaagctcaacgccacg
gaactgcgcagccaagggtttgccgggctcaacctacgctataacaggattaacgccgat
cagatgcgggactacgcatcgaggaacatcagcaccaatgtgtacctggtgaacgagccc
tggctgctgtctgtgctgtggtgtgcgggcgtccagtctgtcacctccgatgcctgtcag
ctccttagcaaagtacagtctcccaactggatgatgcaaccggatgagtatctaacgctc
tgggttgcgtcagacatcatatccgtcaccatcgtggtgggtatcttcatcctgcaaaat
tatcacttgatcaggtatcgcctgggcagcatgcggtcctacaacccggagcagatcatg
ctgagtgcggcagtccgcaggtccagcagggatgtcaacatcatgaaggagaagctgatc
ttctcagagatcaacaatggtctggccggttcggacgacggctcgctctgctccgagagc
gcggttttgacagctacatga
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