Leucoraja erinaceus (little skate): 129698563
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Entry
129698563 CDS
T09122
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04137
Mitophagy - animal
leri04144
Endocytosis
leri04145
Phagosome
leri04148
Efferocytosis
leri05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129698563 (rab5b)
04145 Phagosome
129698563 (rab5b)
04137 Mitophagy - animal
129698563 (rab5b)
04148 Efferocytosis
129698563 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129698563 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129698563 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129698563 (rab5b)
04031 GTP-binding proteins [BR:
leri04031
]
129698563 (rab5b)
Membrane trafficking [BR:
leri04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
129698563 (rab5b)
Endosome - Lysosome transport
129698563 (rab5b)
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129698563 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
129698563 (rab5b)
Exosomal proteins of colorectal cancer cells
129698563 (rab5b)
Exosomal proteins of melanoma cells
129698563 (rab5b)
GTP-binding proteins [BR:
leri04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
129698563 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
129698563
NCBI-ProteinID:
XP_055493619
LinkDB
All DBs
Position
7:1255284..1299719
Genome browser
AA seq
214 aa
AA seq
DB search
MMASRGASRPNGLGQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKQETFDRAKAWVKELQR
QASPNIVIALAGNKADLADKRMVEYEEAQTYAEDCGLLFMETSAKTAMNVNDIFLAIAKK
MPKNDPQNPATAARNRGLNLQETNQQSQRGCCGN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaagcagaggagcctccagaccaaatggccttggccagacaaagatctgccag
ttcaagctagttctactgggagatatggcagtgggtaaatcaagtttagttctgcgattt
gtcaaaggccagtttgacgaattccaagagacaacgatcggtgctgcctttcttgctcag
tccgtttgtttggatgacacaacggtgaaatttgagatttgggatactgccggtcaggaa
cgttaccacagtttagcaccaatgtattacaggggagcccaagctgccatagtggttttt
gatatcacaaaacaggaaacatttgatagagcaaaagcatgggtaaaggagttgcagaga
caagccagtcctaacatagtgatagcgttggctggcaataaagctgatctggcagataaa
cgaatggtggagtatgaggaagcacaaacatatgcagaagactgtggccttctcttcatg
gagacatcagcaaagactgccatgaacgtcaatgatatatttctagcaatagctaagaaa
atgccaaaaaatgatcctcaaaatccagcaaccgcagctagaaatcgggggttaaatcta
caagaaacgaatcagcagagccaacggggttgctgtggcaattaa
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