KEGG   Leucoraja erinaceus (little skate): 129698563
Entry
129698563         CDS       T09122                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04137  Mitophagy - animal
leri04144  Endocytosis
leri04145  Phagosome
leri04148  Efferocytosis
leri05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:leri00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129698563 (rab5b)
   04145 Phagosome
    129698563 (rab5b)
   04137 Mitophagy - animal
    129698563 (rab5b)
   04148 Efferocytosis
    129698563 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129698563 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:leri04131]
    129698563 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:leri04147]
    129698563 (rab5b)
   04031 GTP-binding proteins [BR:leri04031]
    129698563 (rab5b)
Membrane trafficking [BR:leri04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    129698563 (rab5b)
 Endosome - Lysosome transport
    129698563 (rab5b)
Exosome [BR:leri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129698563 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   129698563 (rab5b)
  Exosomal proteins of colorectal cancer cells
   129698563 (rab5b)
  Exosomal proteins of melanoma cells
   129698563 (rab5b)
GTP-binding proteins [BR:leri04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    129698563 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase SDR-like AAA_16
Other DBs
NCBI-GeneID: 129698563
NCBI-ProteinID: XP_055493619
LinkDB
Position
7:1255284..1299719
AA seq 214 aa
MMASRGASRPNGLGQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKQETFDRAKAWVKELQR
QASPNIVIALAGNKADLADKRMVEYEEAQTYAEDCGLLFMETSAKTAMNVNDIFLAIAKK
MPKNDPQNPATAARNRGLNLQETNQQSQRGCCGN
NT seq 645 nt   +upstreamnt  +downstreamnt
atgatggcaagcagaggagcctccagaccaaatggccttggccagacaaagatctgccag
ttcaagctagttctactgggagatatggcagtgggtaaatcaagtttagttctgcgattt
gtcaaaggccagtttgacgaattccaagagacaacgatcggtgctgcctttcttgctcag
tccgtttgtttggatgacacaacggtgaaatttgagatttgggatactgccggtcaggaa
cgttaccacagtttagcaccaatgtattacaggggagcccaagctgccatagtggttttt
gatatcacaaaacaggaaacatttgatagagcaaaagcatgggtaaaggagttgcagaga
caagccagtcctaacatagtgatagcgttggctggcaataaagctgatctggcagataaa
cgaatggtggagtatgaggaagcacaaacatatgcagaagactgtggccttctcttcatg
gagacatcagcaaagactgccatgaacgtcaatgatatatttctagcaatagctaagaaa
atgccaaaaaatgatcctcaaaatccagcaaccgcagctagaaatcgggggttaaatcta
caagaaacgaatcagcagagccaacggggttgctgtggcaattaa

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