Leucoraja erinaceus (little skate): 129698577
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Entry
129698577 CDS
T09122
Symbol
tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129698577 (tbc1d1)
Membrane trafficking [BR:
leri04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129698577 (tbc1d1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129698577 (tbc1d1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
129698577 (tbc1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
CC_Liprin_beta
PilP
Motif
Other DBs
NCBI-GeneID:
129698577
NCBI-ProteinID:
XP_055493644
LinkDB
All DBs
Position
1:complement(74410974..74664788)
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AA seq
1266 aa
AA seq
DB search
MNRKSGGGGDGDGDGGLSPGEAGSKCHRFSLQLVGSVAVHRLTTAPMLPWLVAEVRRQSG
RGAGSRRVALQVSPGWLRCAEHGSHTPVFIHRAQQVHWPRQYRAEPNYFIYLNSTRTADP
SLCFVFRASDHTLVPEIINAIRQAGKTVSQEGAQIRMHEDDSFAQKYEVLFVGKVTVAHK
KAPPALIDECIDKFNLLREHDEDDAQGALAEKGPERPPAEISLSLRSKLLVPLSQKRNKS
APWLTVQHEPLAVPSQGTLEKCKSLDGSNTLNCDGAESGGLVDAMKRAASVPNFVQPTNM
KANRTMLFTIGQSEVYLISPDTKKVTIEKSFKEISFCSQGIKYVDHFGFICRENPDSGSC
HFVCYVFQCTNEALVDEIMLTLKQAFTAAAVHQNMKIQAQLCEGCPLNSLHKLCEKIEGL
HPSKAKVEIQKHLSTFNNKDQGSIFEGVQKMKPKNELEENELVLSMLRQLYEEKQKQHVH
NGDAKQTLPSCPQQSSATEQLSLSARFKLDNLKSKAKKSLAESLENILSMGGSRLKSHAS
AGNRVTDKTSVSLSSLSKAMSLDESDDQAVPISPVKSHGSTGNLLQDINDSTEATEPAFR
RRANTFSHMPSSREQPKQIIAETPSFPKPKLMRYHSVSTDTPHKQNSPNLSNDNTSSKCA
HPKLHRPVDHLRASTSSPNFLKYLKTSSGGRDGGLMVKSASQLSSLRSRLPSSTSAPNFL
KFLVPVAQNHSSKSDYESRPSPGRETNNSGNFVRVRRQSWRQQIFLRVASPQKGCESPCK
MQAFKYFHHCEGGDVTSWTSLVTTCNDSYLGAVAEERKRTSGELRDLWRKAILQQILLLR
MEKENQKLQATESDLQNKRLKLDYEEITLCLKEVTLVWEKMLNVPSRSIVKFDMENIHMA
MGQGVPRHHRGEIWKLLAEQHQLRYQLPAKQQPKNTPYQELLKQLTSQQHAILIDLGRTF
PTHPYFTTQLGAGQLSLYNLLKAYSLLDPEVGYCQGLSFVAGILLLHMSEEDAFQMLKFL
MYDMGLRRQYRPDMIILQIQMYQLSRLLHDYHRDLYCHFEENEISPSLYAAPWFLTVFAS
QFPLGFVARVFDMIFLQGSEVIFKVALSLLRSHKPLILQHESLESIIDFIKSTLPNLGLV
QMEKTINQVFGMDLSKQLQAYEVEYHVLQDELIDSSPTMTENERLEKLEKNNNSLRKQNS
DLLEELEVAHTKIESLEATVNTLLSNEGKLKQAIHTLELERAALLATVEEFHQQVPSSEH
VSDNTF
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagagtggcggcggcggcgacggcgacggcgacggcgggctgagccccggc
gaggccggctccaagtgtcatcgcttcagcctgcagctggtgggctcggtggcggtgcac
cgcctcaccacggcgcccatgctgccctggctggtggccgaggtgcggcgacagagcggc
cgcggggctggcagccgtagggtggccttgcaggtgagcccgggctggctacgctgcgcc
gagcacggttcccatacacccgtcttcatacaccgggcacagcaagtccactggccgcgg
cagtaccgcgccgaacccaactacttcatctacctgaacagcaccaggactgccgacccc
agtctttgcttcgtcttcagagcgtccgatcacacactggtccctgagataatcaacgca
atccgtcaagctgggaagacagtctctcaggaaggggcccaaatccgcatgcatgaagat
gactcatttgctcagaagtatgaagtcctatttgtggggaaggtgacagtggcacacaag
aaagctcctccagcactgatcgatgaatgtatcgacaaattcaacctcctccgggaacac
gacgaggatgatgcacaaggagcgcttgcagagaaagggccagagagaccaccagcagag
atctcactgtcgttacgctccaaactattggtaccgttgtcgcagaagagaaacaaatct
gctccttggctgacggttcaacatgagcctctggctgtcccgtcacagggtactttggag
aaatgtaaatcgctggatgggagcaacaccttgaactgtgatggagcggagagtggtggc
ttagtggatgccatgaaacgtgcagctagtgtgcccaattttgtgcagccaacaaatatg
aaggcaaataggacaatgctgttcacgattggccagtcggaagtttacctcataagtcct
gacacaaagaaagtaacaattgagaaaagcttcaaggagatctctttctgttctcaggga
attaagtatgtggaccactttggattcatctgcagggagaatccagacagtggaagctgc
cattttgtctgttacgtgttccagtgtactaatgaggccttggtcgatgaaataatgttg
acgttgaagcaagcattcactgcggctgctgtgcaccaaaacatgaagatccaagctcag
ctctgcgagggatgccctttgaattctctccacaaattatgtgaaaagatagaaggtctg
catccttcaaaggcaaaggtggaaattcagaaacacttatcaacatttaacaacaaagat
caaggatcaatttttgagggggttcagaaaatgaaaccgaaaaatgaactggaggaaaac
gaactggttctttccatgctgcgacagctctacgaagagaaacagaaacagcatgtccac
aatggagatgcaaaacagaccttgccaagctgcccgcagcagtccagtgccaccgagcaa
ctatctctctctgcccgtttcaagctggataacctgaaaagcaaagcaaaaaagtcattg
gcagaatcgctagagaacattttatcgatgggagggtctcgactcaaaagccatgcaagt
gctgggaatagagtaacagataaaacatctgtgagtctatcaagcctatctaaggccatg
tccttggatgaaagtgatgaccaggcagtacctattagtcctgtaaagtctcatggttcc
accgggaacttgctgcaagacataaacgacagcactgaagcaactgaaccagcatttcga
aggcgagccaataccttcagtcacatgccctccagccgcgagcaaccaaagcagatcatc
gccgagaccccatccttccccaaaccaaaactgatgaggtaccactcagtgagcacagac
acgccacacaaacaaaatagcccaaacctatcaaacgataacactagcagcaaatgtgca
caccccaagttgcacaggcctgtagatcacctgagggcttcaacctccagcccaaacttc
cttaagtatttgaagacgagttccggtggaagggatggcgggctgatggtaaaaagcgct
tctcaactgagcagcctacgatcaaggcttccttcttcaacttctgcaccaaactttctg
aaatttctagttcctgtagctcagaaccacagcagcaaaagtgactatgaatccaggccg
agtccgggcagagagaccaacaacagcgggaattttgtccgcgtccgccggcagtcctgg
cgacagcagatctttctccgagtggcctcaccgcaaaaaggatgtgaatccccctgcaaa
atgcaagccttcaaatatttccatcattgcgagggaggagatgttacctcgtggacgtct
ttggtgaccacgtgtaatgacagttacctgggggcagttgcagaggaaaggaaacgcaca
tcaggggagctccgagatttatggaggaaggcgattctccagcagatactgttgcttaga
atggagaaagaaaatcaaaagctacaagcaacagaaagtgacctgcagaataaaagactg
aagctggattatgaggaaatcacattgtgcctaaaagaagtgactctggtttgggagaaa
atgctcaatgtaccttcaaggtcaatagttaaattcgatatggagaatattcacatggcc
atgggtcaaggagtgcctcggcaccatcgaggggaaatatggaagcttctcgcagagcag
catcagctgaggtatcagctccctgcgaaacaacagccaaagaacactccatatcaagag
ctattaaaacagctgacgtctcaacagcacgccatactcattgaccttgggcgcacattt
ccaacacatccctatttcactactcagctgggtgctggacagctttcgctgtacaatctt
ctcaaagcctattctctgctggatccagaggtgggctattgccaaggccttagttttgtg
gcaggaatcctgctgctgcatatgagtgaagaagatgcatttcagatgctgaagtttctc
atgtatgacatgggcttgagaaggcaatatcgtcccgacatgattattttacagatacag
atgtaccagctttcacgactcctccatgactatcaccgagatctctactgccattttgag
gagaatgaaattagccccagcctatatgctgcgccatggtttctcactgtatttgcctct
cagtttcctttgggttttgtggccagagtgtttgatatgatcttccttcaaggctcagag
gtcatctttaaggtagctcttagtctgctacgaagccacaagccactaattctgcagcat
gagagtctggaatcaataattgactttattaagtccacgctccctaatcttggactagtg
cagatggaaaaaacaataaatcaggttttcgggatggacctatccaagcaactccaggcc
tatgaagtcgagtatcacgttcttcaggatgagctgatagattcttctccgacaatgacg
gaaaatgagcgtttggaaaaattggaaaagaacaacaatagtttacgaaagcaaaacagt
gacctgctggaggagcttgaggttgctcacactaagatcgaaagcctggaagctacagtc
aacaccttgctctctaatgaagggaagttaaagcaagccattcatacacttgagttggag
agagctgcactcctggccacggttgaagaatttcatcagcaggtgcccagctccgagcac
gtcagtgacaacactttctga
DBGET
integrated database retrieval system
