Leucoraja erinacea (little skate): 129698731
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Entry
129698731 CDS
T09122
Symbol
chrna1
Name
(RefSeq) acetylcholine receptor subunit alpha isoform X1
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
leri04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129698731 (chrna1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129698731 (chrna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129698731 (chrna1)
Ion channels [BR:
leri04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
129698731 (chrna1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129698731
NCBI-ProteinID:
XP_055493911
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All DBs
Position
7:22760788..22798423
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AA seq
461 aa
AA seq
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MILSDYSHVGLMLLLFSCGGLVLASEHETRLVANLFQSYNKVIRPVENHKHCVNVTVGLQ
LIQLINVDEVNQIVETNVRLRQQWVDVKLRWTPEDYGGIKKIRVPSSDIWLPDIVLYNNA
DGDFAIVQMTKVLLEHTGKIIWTPPAIFKSYCEIIVTHFPFDQQNCSMKLGIWTYDGTKV
SISPESDRPDLSTFMESGEWVMKDYRGWKHWVYYTCCPDTPYLDITYHFIMQRIPLYFVV
NVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGK
YMLFTMIFVISSIFITVVVINTHHRSPSTHTMPYWVRKIFIDTIPNVMFFSTMKRAAKEK
QDKQIFTEDIDISDISGKQVSGGAVFHTPLIKNPDVKSAIEGVKYIAEHMKSDQESNNAA
EEWKFVAMVIDHILLGVFMLVCIIGTVSVFAGRLIELNQEG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgattctgtccgattactcgcacgtggggttgatgctactgttattttcatgtggtggt
ctggtgttggcttctgaacatgaaacgcgtttggtggctaatttattccaaagctataac
aaggtgattcgtccggtggagaatcacaagcattgtgtgaatgtcacagtgggtctgcag
ctgattcaactcatcaatgtggatgaagtcaatcaaattgtggaaacaaatgtgcgcctc
aggcagcaatgggttgacgtgaagcttcgctggactccagaggactatggtggaattaaa
aagatcagggtgccttcttcagatatttggctaccagatatagttctgtacaacaatgct
gatggtgattttgccattgttcaaatgaccaaagtccttttggaacatacaggaaaaata
atctggacacctccagcaattttcaaaagctactgtgaaattattgtaacacatttccca
tttgatcaacaaaattgtagcatgaagctgggaatctggacatatgatggtacaaaagtt
tccatatccccggaaagtgaccgtcctgatttgagtacctttatggagagtggagaatgg
gtaatgaaagattaccgtggatggaagcactgggtgtactacacctgctgtcctgatact
ccttacctggacatcacctaccacttcatcatgcaacgcatccctctgtattttgttgtg
aatgtcatcattccttgtctgctcttttcattcttaaccggattagtattttacttgcca
actgattcaggtgaaaaaatgactttgagtatttctgttttgctgtctctgactgtgttc
cttctggttattgttgagctgattccttcaacttccagcgctgtgccattgattggcaaa
tacatgctttttacaatgatttttgtcatcagttccatcttcattactgttgttgtaatt
aatactcatcatcgctctccaagtacacatacaatgccgtactgggtacggaagattttt
attgatactatacccaatgtcatgttcttctcaacaatgaagcgagcagctaaggagaag
caagataaacagatatttactgaggacattgatatatcggatatttctggaaagcaagta
tcaggaggtgcagttttccatacacctttaattaaaaatccagatgtcaaaagtgctatt
gagggagtcaaatatattgcagagcacatgaagtctgatcaggaatcaaacaatgctgca
gaagaatggaaatttgttgcaatggtgattgatcatattctgctgggtgtcttcatgctg
gtttgtattataggtacagttagtgtgtttgctggccgtctcattgaactcaatcaggag
ggctaa
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