Leucoraja erinaceus (little skate): 129698868
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Entry
129698868 CDS
T09122
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129698868 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
leri01009
]
129698868 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129698868 (tra2b)
Protein phosphatases and associated proteins [BR:
leri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129698868 (tra2b)
Spliceosome [BR:
leri03041
]
Common components
Common spliceosomal components
SR proteins
129698868 (tra2b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
129698868
NCBI-ProteinID:
XP_055494181
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All DBs
Position
7:34188407..34224165
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AA seq
319 aa
AA seq
DB search
MVVGRALPFVLQAGGPHASHCSAGGVCWRPRSICFQFSRSRARLGVNKFKKTRGRETQND
SRSPSKSASESLRGSGKSASHSPAHSAERSHSKDGSRHSRSKSRSRSRSKSRSISRRSSR
RRYSRSRSRSHRRRSRSRSYSPDYRRRRSHSRSPMSNRRRHIGNRANPDPNTCLGVFGLS
LYTTERDLREVFSRYGPLAGVNVVYDQQSNRSRGFSFVYFENVDDAKEAKERANGMELDG
RRIRVDFSITKRAHTPTPGIYMGRPTYSSRRRDSYDKYDRYDDRECYSKSYRRRSPSPYY
SRGGYRSRSRSRSYSPRRY
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgggacgtgccctcccgttcgtcctacaggcaggcgggccacatgcttctcac
tgcagcgctggcggggtgtgctggcgaccccgaagtatttgtttccaatttagcagatct
cgagcacgcttgggcgtaaacaaatttaagaagacaagggggagggagacccaaaatgat
tcgcgttccccatctaaatctgcaagtgaaagcctgcgtggatctggcaagtctgccagc
cattctccagcacattctgctgagcggtctcattctaaggatgggtcaaggcactcccgg
tccaagtcgcgatcacgttcacgttccaaatccaggtctatatctcgaaggagttcccgg
agacgttattcaaggtctcgatctcgctctcatcggaggcgatctagaagcaggtcctac
agtcctgattataggcgccgccgtagccatagccggtcgcctatgtcaaatcggagacgc
catattggtaatcgggctaaccctgaccccaacacttgtctgggagtttttggactaagt
ttgtacaccactgagcgagatctgcgagaagtattttcgagatatggtcctcttgcaggc
gtcaatgtcgtttatgatcaacaatcaaatcgttccaggggtttttcttttgtctatttt
gaaaatgttgacgatgctaaagaggctaaagaacgggctaatggaatggaattagatggg
cgcagaatccgtgttgatttctccattactaaaagagctcatacgcccacccctggaatt
tacatgggaagaccaacctatagttcacgtcgcagagacagttatgacaaatatgacaga
tatgatgaccgagagtgttacagcaaatcctacagaagacggtcgccctctccctattac
agccggggtggttatcgctctcgctccagatcacgctcctactctccacgtcgttactga
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