Leucoraja erinaceus (little skate): 129698870
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Entry
129698870 CDS
T09122
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04371
Apelin signaling pathway
leri04910
Insulin signaling pathway
leri04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129698870 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
129698870 (ppargc1a)
04920 Adipocytokine signaling pathway
129698870 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
leri03029
]
129698870 (ppargc1a)
Mitochondrial biogenesis [BR:
leri03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
129698870 (ppargc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
129698870
NCBI-ProteinID:
XP_055494204
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Position
1:84319690..84889555
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AA seq
835 aa
AA seq
DB search
MAGCGLNEDLFFSSSSSSSSFLFSYIKESPFTQQCAALVGEDQPLCSDLPELDLSELDVN
DLDTENFLGGLKWYSDQSEIISNQYGSDSSDLFEKMDEENEANLLAALTETLDSIPIDED
GLPSFDALTDGDVTSVDDPSSPSTPDGTPMTPEAEEPSLLKKLLLAPANSQCTYNECHGG
SSHIRATNNNRIGPSPAVVKVEASLNPKARNVSQQQKSQAQRRRCTELLKYLTANDTPQS
RINEHKITSKDKNVSKKKIQLQSQPSCNLQARPTTLSLPLTPESSTDPKGSPFETKTIER
TLSVQLSGTAGLTPPTTPPHKANQDNPFKAAVKHRSSCGSSVRSPPPKKLRLSVSASSSQ
RSSPIKIGTEQTELYAQLSKNSDLPSAFSITQSEERKMKRTNTRLFGDHDYCQFMNAKAE
SLTTMTFYKAREPKDIKLQDLSSRVASPRDRKISVLPVKEDPICKKESQQLEAQPSNYSG
PRLQLKDQEIRAELNKHFGHPCQAFFDEMEDEASPQREKDFCHGYYSKLPTFLSAGMSLD
GVFDESDDETEKFLYPWDGTPDGLLLERSCSRSLSSSPCSDSIYSPKTYAPSQRIVRARS
RSSSYPRRRHYSRSPYYHSRSRSPYNRSSSRSHHCYDSGRSRVQHRSRGSPCSYSRSRSR
SPFSRYSRPRYDSYEEYENERLKREEYRKDYEKREFERAKQRERQRQKAIEERRVIYVGK
VRGDITRTELKRRFEVFGEIEECTVHLREDGDNYGFITYRYTCDAFAALENGHTLRRSHE
PPFELCFGGRRQFYKSNYADLDSNSDDFDPASTKSKYDSMDFDTLLKEAQRSLRR
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctgtggactaaacgaagacctcttcttctcctcctcctcctcctcctcctcg
tttctcttcagctacatcaaagagagcccattcactcagcagtgtgctgccttagtaggt
gaagatcagcctctgtgttcagatctccctgaacttgacctttctgagctcgatgtgaat
gacttggacacagaaaattttctaggtgggctcaagtggtacagtgaccaatcggaaatt
atttccaatcagtatggctctgactcatctgatctctttgagaagatggatgaagaaaac
gaggccaaccttttggctgctctaactgagacattggacagcatcccgatagatgaggat
gggctgccatcatttgatgcactgacagatggggatgtgaccagtgtcgatgaccctagc
tctccctcaacgcctgatggcactcccatgaccccggaggctgaagagccatctctactg
aagaagctcttgctggctccagctaattcccaatgtacttacaatgaatgccatggaggc
agctctcacatccgcgcaaccaataataacaggattggaccaagccctgctgttgtcaag
gtggaggcatctttgaatcccaaggcaaggaatgtttcacaacagcagaagtcacaggcc
cagcgtcgccgatgtacagaattgctcaagtatttgacagctaacgacacccctcagtcc
cggataaatgagcacaaaattactagcaaagacaaaaacgtctcgaaaaagaagatacag
ttacaatcccaaccatcatgcaacctccaagcgagaccaacaacactctctctgcccttg
acaccagaatcatcaactgatccaaaaggttccccatttgaaaccaagaccattgaacgt
acgttgagcgtgcaactatctggtactgctggtctgacaccaccaaccactcctccacat
aaagctaaccaggataatccgtttaaggctgcagtcaaacacaggtcatcttgcggttct
tcagtacgcagtccacctccaaagaaattgcggttaagtgtttctgcctcaagctctcaa
cgaagcagtcccataaagataggcactgaacaaactgaactctatgcccaactcagtaag
aattcagatttacccagtgcatttagcattacccaaagtgaagagaggaagatgaaacgg
acaaatacaagactctttggtgatcatgactactgtcaattcatgaatgcaaaggcagag
tcattaactaccatgacgttctacaaagcaagggaacccaaagacattaaactccaggat
ttgtcttccagagtggcctcgcccagagaccgtaaaataagtgtacttcctgttaaagaa
gatccaatatgtaagaaggaaagccagcaactggaagcacagcccagcaattattctggt
cccagattacaattgaaagaccaagaaatcagggcagagctaaacaagcactttggtcat
ccatgtcaagccttctttgatgaaatggaagatgaggcaagtcctcagagggaaaaagac
ttttgccatggatattactcaaaactgccaacttttctcagtgcagggatgtcgctggac
ggtgtgtttgatgagagtgatgatgagactgaaaagttcctctatccatgggacggaaca
cctgatgggttattattagaaagatcttgttctcgttctctgtccagctctccatgcagc
gattccatctactcaccaaagacttatgcaccttctcaaagaatagtcagggcaagatcg
agatctagttcctatcctagacgtagacattattctcgctccccatattatcattccaga
tcaagatctccttacaatagatcctcatctagatcacaccactgctatgattcagggcgc
agtagggtacaacacaggtctcgtggaagcccttgctcatactcaaggtcacgctccagg
tctcccttcagtcgttatagtagacccagatatgacagctatgaggaatatgaaaatgag
aggctgaagagggaggaatatcgaaaggactatgagaaacgtgaatttgaaagagcaaaa
caaagggaacgtcaaaggcaaaaggcaattgaggaacgccgtgttatttatgtgggaaaa
gtcaggggtgacataacacgtacagaacttaaaagacgttttgaagtttttggtgaaatc
gaagaatgcactgtacatttgcgtgaagatggtgacaactatggtttcatcacatatcgt
tacacttgtgatgcctttgctgccctcgagaatggacacactttgcgaaggtctcatgag
ccaccatttgaattgtgctttggtggtcgtagacagttttacaagtcaaactatgcagat
ctagattccaattcagatgactttgaccctgcttcaactaaaagcaagtacgactcaatg
gattttgataccttgctgaaagaggcccagcgaagcttgcgtaggtaa
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