Leucoraja erinaceus (little skate): 129698941
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Entry
129698941 CDS
T09122
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129698941
Spliceosome [BR:
leri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129698941
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
129698941
NCBI-ProteinID:
XP_055494402
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Position
7:44652313..44866053
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AA seq
765 aa
AA seq
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MAEQRVVRKRSGDNEPDQRDHWTQDMFGRKWEQAGNRNKSMAEDRSLGYHQSRSQQKYFT
LDVDDEDGENMSSSSTDVKENRNLENVSLKESNQTPGETQLSNGSNSSINRKRPLEEGNN
GHSHPKFRAKKRKKTPGPILPKNALMQLNEIKPGLQYKLLSQSGPVHAPVFIMAVEVNGQ
NFEGSGPTKKKAKLHVAERALRSFVQFPNASEAHLAMGRMLNVNTDFTSDHSDFPDTLFN
GFETPAQGDDPYLLGSNGDGSFNSGDYNSFGVSCVAGGNTVGQSAMITPSSFVMTSGKNP
VMILNELRPGLKYEFVSESGESHAKNFIMAVTVDGQMFEGSGRNKKLAKARAAQATLQTL
FNMQLDSTPSRQPILSEGLQLHLPQVLADAVARLVVDKFSELTDNFASPHARRKVLAGIV
MTTGTDVKDAMVICVATGTKCINGEYMSDRGLALNDCHAEIVARRSLIRFLYSQMECYLS
NKTEDHHRSIFIKCEGGGFKLKENVQFHLYISTSPCGDARIFSPHEAAVEDQGDKHPNRK
ARGQLRTKIESGEGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVLGLQGALLSH
FMEPLYFASIILGSLYHADHLSRAVYQRIGDIEELPSIYTLNRPLLSGISNTESRQPGKA
PNFSVNWAVDDTALEVINAMTGKDDMGRPSRLCKHALYSRWLRLHAKLPCLLQSKQEKSG
SYYDAKQAAVEYQAAKETLIKEFQKSGLGMWVKKPIEQDQFVLSV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagcgcgttgtgcgaaagcggagtggggacaacgagcctgaccaacgagat
cactggacccaagatatgtttggaaggaaatgggaacaagcaggaaaccgtaacaaatcc
atggctgaagatagatcacttggctaccaccagtcgagaagccagcagaaatattttact
ttggatgtggatgatgaggatggtgaaaacatgagttcaagcagcactgacgtaaaagag
aaccgtaatctggagaacgtctctcttaaggaaagcaatcaaacacctggtgagacgcag
ctttcaaatggcagcaattcctccattaacagaaaacgaccgttggaagaaggcaataat
gggcactcacatcctaagttccgtgctaagaagaggaagaaaacaccaggtcccattctg
ccaaagaatgcacttatgcaattaaatgaaattaaaccaggcctccagtacaagttgctg
agtcaatctggcccagtccatgctcctgttttcatcatggctgttgaggtcaatggacaa
aactttgaaggatctggacccaccaagaaaaaagccaagttacatgtagctgaaagagcc
ctgaggtcctttgtccagtttccaaatgcttctgaggcccacttggctatgggtcggatg
ctgaatgttaatacagactttacttcagatcattctgactttccagatactctctttaat
gggtttgaaaccccagcacaaggagatgatccttacctcttagggtccaatggagatggt
tccttcaattcaggtgactataattcttttggtgtctcgtgtgttgctggaggaaatact
gtaggtcagtcagcaatgattactccatcttcttttgtcatgactagtggaaagaaccca
gtcatgatcctgaatgaactgcgcccaggactcaaatatgagtttgtttctgagagtgga
gagagccatgcaaaaaatttcatcatggctgtgacagtagatgggcagatgtttgaaggg
tcagggagaaacaagaagttggcaaaggctcgtgccgctcaagcaactcttcaaactctg
tttaacatgcaactggactcaactccatcacggcaacctattctcagtgaaggacttcag
cttcacctgcctcaggtgctggcagatgctgtggctcgattggttgtggataaattcagt
gaactgactgacaacttcgcctccccacatgcaaggaggaaagtgcttgctggcattgtc
atgacaacaggaactgatgtcaaagatgccatggttatatgtgttgccactggaactaaa
tgtatcaacggcgagtatatgagtgaccgaggcctggctctgaatgattgtcatgccgaa
attgttgcacgtagatctctcatccggtttctttattcccaaatggagtgttatttaagc
aacaagacagaagaccatcacagatcaatttttattaaatgcgaaggaggtggcttcaaa
cttaaggaaaatgtgcagttccacctttacatcagtacatcaccatgtggagatgcccgc
atcttctcaccacatgaggcagcagtagaggatcagggagacaagcacccaaatcggaag
gcacgagggcaactcaggacaaaaattgaatctggtgaagggacaattccagttagatcc
agcaacaccattcagacatgggatggagtgttacaaggagaacgtttactcactatgtca
tgtagtgataaaatagccagatggaacgtgcttggattacaaggagctctgttaagccat
tttatggagcctctttattttgccagcattattctgggtagtttataccatgctgatcac
ttgtctcgtgccgtctaccagcgaattggtgatatcgaagagctcccaagcatatatact
ctcaacaggcctttgcttagtggtataagtaacactgaatcacgtcagccaggcaaagct
ccaaatttcagtgtcaattgggctgtagatgacacagccttggaagttattaatgccatg
acagggaaagatgatatggggcgaccgtctcggctgtgtaaacacgctctttacagtcgc
tggttacgcttgcatgccaagttgccatgtttgcttcaatccaagcaagagaagtctggt
tcttactatgatgcaaagcaggctgctgttgaatatcaagctgccaaggagaccttgatc
aaagagttccagaagagtggactaggcatgtgggtgaaaaaacccattgaacaggatcag
tttgttttgtctgtctaa
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