Leucoraja erinaceus (little skate): 129698961
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Entry
129698961 CDS
T09122
Symbol
traf3ip1
Name
(RefSeq) TRAF3-interacting protein 1 isoform X1
KO
K19680
TRAF3-interacting protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
leri03037
]
129698961 (traf3ip1)
Cilium and associated proteins [BR:
leri03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
129698961 (traf3ip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIP-T3_C
MIP-T3
DUF1843
Motif
Other DBs
NCBI-GeneID:
129698961
NCBI-ProteinID:
XP_055494453
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All DBs
Position
7:47049670..47134537
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AA seq
676 aa
AA seq
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MSSHFVKRTQDSLGKVIKKPPLTEKLLSKPPFRYLHDIFTEVIRITGFLKGLYTDFEMKS
DNVKDKDAKIAFLQKAIDVVMMVSGDSLSVKPARIVAGHEPEKTNELLQAIAKCCLNKLS
SDDSVRRVLTGEKTDPKAKAPSSSKSQGKENREKSDEHKRQKDKELEEKNDNGIKDSSRD
RKEKEQSRERGKQMDKERDRHKDGDRRERTKEQERDRAKTKEKDQENHKNRGDGERVEKE
KNRGTEKVEKDKIRGDGEKDKERSKERERNRDKEKTREKREKDKREEHEHLKDQSRDQEM
EKEKAKEQEKSERRSKVIAEDKPPIQPSEVVKKDIKTDAEQEVESPVRIPRPSSAKGQRR
KPKSGVEEEGKESKTSLSQQEVLEQKSGKESKVTKLDVSDVEGDPEAAQYSIEKKHAAEV
NGEVTDELSLQAVQSKRIPRPGSARPAPPRVKKQESTDSPPERVSSAKPLTNVIVEQGKN
AEEEEEDDDEQFVVEEAVSQLPDMPEMEPVAAMELQDNEDHGGLVKKILETKKDYESSKS
VTKHKDQEKTIISETARKKEKELVTKEIEKLRMSIQTLCRSALPLGKIMDYIQEDMDSMQ
NELSMWRKENKKHAESLLREQSVTDTAVEPLKTELAELEQLIKDQQDKNCAVKANILKNE
DKIQKMISSINFTSRT
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccacttcgtgaaacgcactcaagattcgcttggaaaagtgatcaagaagccg
cctctgaccgagaagctgctcagcaagccgccctttcgctacctgcacgacatctttacc
gaggttataaggatcaccgggttcttgaaaggactgtatacagactttgagatgaaatct
gacaatgttaaggataaagatgctaaaattgcattcctacagaaggctattgatgtagtg
atgatggtgtctggtgattctttgtctgtgaaacctgcacgcatcgtggctggtcacgaa
ccagagaaaactaatgagcttttgcaagctattgcaaaatgttgccttaacaagctttct
agtgatgattctgtgaggagggtccttactggagaaaagacagatcctaaagcaaaagca
ccatctagctccaaatctcaggggaaagaaaacagagaaaaaagtgatgagcacaagagg
caaaaagacaaagaactggaggaaaagaatgataatggaattaaagactctagcagagac
cgaaaagaaaaagaacagtcaagggaacgtggaaaacaaatggataaagaaagggatcga
cacaaagatggtgatagacgcgaaaggactaaagaacaggagcgagaccgagcaaaaaca
aaagaaaaggaccaggaaaaccacaagaatcgaggggatggagaaagagtggagaaggaa
aagaatcgaggaacagaaaaagtggagaaggacaagattagaggtgatggagaaaaggac
aaagaacgaagtaaagagagagagagaaacagagacaaagaaaaaacgagagaaaaaaga
gagaaggacaagagagaagagcatgagcatttgaaagaccaaagtagagaccaagaaatg
gaaaaggaaaaagccaaagaacaggagaaatcagagagacggtctaaagtaattgcagag
gacaaaccacccatacagccttcagaagtggtgaagaaagacatcaaaactgatgcagag
caagaggttgagagtcctgtgagaattcccagaccctcgtctgcaaaaggccaaagaagg
aaaccaaaatcaggagttgaagaggaagggaaagaatctaaaacatcacttagtcagcaa
gaggtattagaacagaagtcggggaaagaatccaaagtaactaagctagatgtgtctgat
gttgaaggagatcctgaagctgcccaatattcaattgagaaaaaacatgcagctgaggtg
aatggagaggttacagatgaactttctctgcaagctgttcagagcaaacgaatacctcga
ccaggcagtgcaaggccagcgcctcccagagtgaagaagcaagaaagtaccgactctccc
ccagaaagagttagcagtgcaaaacccctgactaatgtaattgtggaacaaggaaagaat
gccgaagaggaggaggaggatgacgatgaacagtttgtggtggaagaagctgtttcacag
cttccagatatgcctgagatggaacctgtggcagcaatggaactgcaagacaatgaagac
catggtggacttgtcaagaagattttggaaactaagaaagattatgaatcttcaaagtct
gtcacaaaacacaaagatcaggagaaaaccatcatctctgaaacagcaagaaaaaaggaa
aaggagctagtgaccaaggaaatagaaaaactacgcatgtccatccagaccctgtgtcgc
agtgccttgcccctggggaagataatggactacatacaggaagatatggattccatgcaa
aatgagttatcgatgtggcgcaaggaaaacaaaaagcatgcagaatctctcctaagagaa
caaagcgttactgacactgctgtggaaccattaaagactgaacttgctgaactggagcag
ctgatcaaggaccagcaggataagaactgtgctgtcaaggcaaatatactgaaaaatgaa
gataagatccagaagatgatttcaagtattaacttcacttcaagaacgtga
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