Leucoraja erinacea (little skate): 129699048
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Entry
129699048 CDS
T09122
Symbol
si:ch211-246m6.5
Name
(RefSeq) von Willebrand factor D and EGF domain-containing protein isoform X1
Organism
leri
Leucoraja erinacea (little skate)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_2
VWD
EGF
hEGF
DL-JAG_EGF-like
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
129699048
NCBI-ProteinID:
XP_055494638
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All DBs
Position
7:complement(58333356..58547769)
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AA seq
1829 aa
AA seq
DB search
MDLLSTFYLPKLSGHCQLFGLFLLNVYISSAQFAPECYPGGYQVLWNPYRSVHFDSIELQ
QFAIQNLICDHSLTPGWYRFMIGDRPAEMPTKCIEMNKCGTQAPIWLSLEDSNSLPQRGE
MKKLTACATWQFFSGSTKDCCLFRIPVSLRNCGDFFVYYLQPTQGCMGYCAVEAITETKS
TPCAPGGVVIDGTCRARLPDLPNKPLITPELVGTSIHLKCTYVSLAINGSMGYVVVWSRI
SPLHMKQEVKRDTTRQMFSFVDMDGTSLKLGDTVYCSVSTFLQDSPGIRSLPKNSEPFFA
GIKFEPESLHIAEDGKEHSLSIQSTVPISCLEDTQHLNNCKLTLQLTINDSDSQSSAPLN
VALSSCQVDLVLMPCVAGSCARSTLSVIAVTDFARDGNRVSNIRIEPIKSNNFLWHGYIP
NIMKVTVKDIPTGHCYSFTDPHIITFDGRGYDNQKTGTFVMYKSLLREFEVHVRQWDCGS
RYYAVSCNCGVVAREGDDIIAFDMCNGQFQETRPRLSVKSSGTEPHHVKIMDAHQGKKIT
IMFPSGAFIRADVSDWGMSITVRAPSVDFNNTRGLCGIFDRNSNNDFHSADGNPMTAAQW
NNDPNDFIEEWRIHSGESLFDKIPSPSVRKKRRNYCKCQKEYTMSLHSVNKLASGYGHSH
PSSRCYAYENVDYTSLIPFLDVTAEYINNPELSLFRKRDIIQSSQRSTGHTALLKYIQSH
GPKEITTKVKSLTGRSVGYSRWPHIIDFTEPGVTLDRMKRQAFYEYLPTFTFQSLSQSDL
ESLTYFFPEDHLSSNRPNVQPKWPTPSGLTSAKALEVCQHALRNSTIGVACQDLLGRRLI
EAVNLCISDLQLKDDLAWEEGMRAFLDNECERKLLENRVKWSHGTNGPRVKEIITALRCP
NSCSNSGHCTTWGCQCFAKYSSYDCSISNARPPEITDLENNGLCDIRIYECNSIRVFGLG
FRDSPHLRCEVISLACINNEWVPGAKHTTKAEFLSTKAVDCPIPALTTTETETVDFMFSD
KPFARWQVKITNDGSLFSDSKVLTLYDGVCQICDNIPTGLCKLKEKTCNIGGLCYGEGDL
NPTSLCLLCNPNISKFTWSINENNQPPIYQESTTKLQTFFGENFVYQFTAVDPEGSAVLF
SLESAPENASLLPAGLLIWKVNSQNSGRFDFTVSDECNAQSTYSVQVAVKSCGCINGGTC
GTDINFPPGSGEYHCVCPVGFEGEFCQENVDDCKSNPCGVGTCIDNINSYSCRCPAGLTG
LTCQEDVNECKKALCFPGVPCFNSFGSYKCGNCPGKMKSDGRSCKGLTNSLRRIITCANK
PCFPGVQCFDRKPPYVGFACGRCPAGLFGTGRTCMKIPRFVTPHVASKFQHHWAATTRPS
DLPAGSQKTTLGHVPVSGRPTMEKVVTIAKAPPILKTDRPYAALSLSPSISSISYGTGTP
AMSSRTISQLTAHPKAPQKNTTFWRPVTSSLRAVTASQALSITHIGNELIPTERKVTCAD
MPCFNGVPCEPTQFGSFKCGQCPFGYTGDGVTCKAICRYPCGKNMECAAPNTCRCKPGYT
GYNCHIAICRPDCKNRGKCIKPDKCECPPGYNGLTCEDAFCIPACEHGGSCITRNTCSCL
YGFVGPRCETLVCNRHCQNGGRCTSPDVCKCKAGWTGPSCETAVCSPMCLNGGICVRQNV
CICPHGFYGLQCQNAVCNPPCKNGGQCMRNNLCSCPEGYTGRRCQQSVCEPLCMNRGKCV
SPGSCDCPSAWKGKRCNQPICLQKCQNGGECMGPSTCHCRAGWEGMLCQIPICEQKCLFG
SKCIRPNVCACRRGYIGLGCARKLPVGRG
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atggatctcttgtctaccttctatctgccaaaactatctggtcactgtcaactctttggg
cttttccttctcaacgtgtatatatcttctgcgcaatttgccccagaatgctacccagga
ggatatcaggttctgtggaacccttaccgcagtgttcattttgattctattgagcttcag
caatttgcaatccaaaacctcatatgtgatcattccttgacgcctggatggtatcgcttc
atgattggggacaggccagccgaaatgccaacaaaatgtatagaaatgaataagtgtggc
acacaagctcccatttggctttctcttgaagattctaactcattgcctcaacgtggtgag
atgaagaaattaactgcctgtgctacatggcagttcttctcaggcagcaccaaagactgt
tgtttatttcgcatccccgtctctctgaggaactgtggagacttctttgtttattatctt
caacctactcagggatgcatgggttactgtgccgttgaagccattacagaaacaaaatca
acaccctgtgctccaggaggagtggtaatagatggaacttgtcgagccaggcttcccgat
ctgcctaacaaaccactgattacccctgagttagttggcaccagcatccatctaaagtgc
acttatgtgagccttgccataaatggcagcatgggatatgtggtggtgtggtcccggatt
tccccacttcacatgaagcaagaagtaaagagggacacaacccgacagatgttctcattt
gtggatatggatggcacttctttgaagctgggggacacggtttactgcagtgtatcaacc
ttcttgcaggactctccaggtatacgcagcctgcccaagaatagtgagccattttttgct
ggtattaagttcgagccagaatctttgcacattgcagaagatggaaaggagcattctctg
tctatccaaagtactgtcccgatctcttgcctggaagacactcagcatctaaataattgt
aaattaaccttgcagctaactatcaatgattcagacagtcagagttccgcacctctaaat
gtagcactgtcatcatgccaggtggatttagtgctgatgccttgtgtggctgggagctgt
gctagaagtactttgtctgttatagctgtgacagactttgcccgagatggaaatcgagtc
agcaatatcaggattgagcctattaaatcaaacaatttcttgtggcatggttatatccca
aatatcatgaaggtaactgtgaaagatatcccgacaggtcactgctattccttcactgat
ccacatattattacatttgatggaagaggttatgacaaccagaaaacaggcacttttgtg
atgtataaaagccttttgcgagaatttgaggttcacgtccggcagtgggactgtggcagt
cggtattatgctgtgtcctgtaactgtggagtcgttgccagggaaggcgatgatatcatt
gcatttgatatgtgcaatgggcagtttcaggagactcggcctcgtttatcagtcaaaagc
agtggaacagaacctcatcacgtcaaaataatggatgcacaccaggggaagaaaatcact
atcatgtttccatcgggggcatttatccgtgcagatgtaagcgactggggaatgagcata
acagtgcgggcacccagcgttgattttaacaacactagaggtctctgtgggatatttgat
cgaaatagtaataatgacttccatagtgcagatgggaatccaatgacagctgcccaatgg
aataatgaccccaatgatttcatcgaggaatggagaatacattcaggggaaagtttgttt
gacaagataccgagcccctctgtgagaaagaaaagaagaaattactgcaagtgccagaaa
gaatatacaatgtcccttcattcagtgaacaagttggcctctggatatggccattctcat
ccatcgtctcgttgctacgcatatgaaaatgtggattatacgtcattaattcctttcttg
gatgttactgcagaatacataaacaatcccgaactatcgttgttcagaaaacgtgacata
atccagtcttctcaaaggtcaactggacatacggccttgctgaaatatattcaatcacat
ggccccaaagaaatcaccacaaaagtcaagtcacttactggtcggtcagtgggatattcc
agatggccacacataattgattttactgaaccaggggttacgctggatagaatgaaaagg
caggctttctacgagtatttaccaacattcacattccagagcctaagccagagcgattta
gaaagccttacttactttttcccagaagaccatttgtctagcaatcgacctaacgtgcag
ccaaaatggccaactccaagtggactgacatcagccaaagctctagaggtatgccaacac
gccctaagaaactccactattggtgtagcgtgtcaagaccttctgggaagaagacttatt
gaggctgtgaatctgtgtatttcagacctgcagcttaaggacgatcttgcttgggaggaa
gggatgcgggctttccttgacaatgaatgtgaaagaaaacttttggaaaatagggttaaa
tggtcccacggaacaaatggtccacgtgttaaagagattattacagctctccgttgtcct
aactcatgtagtaacagtggacattgtacaacgtggggttgccaatgctttgccaaatac
agctcctatgactgcagcatttccaatgctcggcctcctgagattactgatttggagaat
aatggcctctgtgatattcgaatctacgaatgcaatagtatccgagtatttggcctgggc
ttcagggactctccgcatctccggtgtgaagttatcagcttggcgtgtataaataatgaa
tgggtaccaggagctaagcatacaacaaaagcagagttccttagcaccaaagcagttgat
tgcccaattccagccttaacaactacggaaactgagactgtggacttcatgttttcagac
aaaccatttgccaggtggcaagtaaagattacaaatgatggatccttgttcagtgattcg
aaggttttgacactttatgatggagtttgccagatctgtgataacattccgactggactt
tgtaagttgaaggaaaaaacgtgcaatataggtggactgtgttatggggaaggagaccta
aatccaacaagcctttgtttgctgtgcaacccaaacatatccaagttcacctggtctatt
aatgaaaacaatcaaccaccaatttatcaagagtctaccaccaagctccagacatttttc
ggtgaaaattttgtgtaccagttcacagcagtggatccagaagggtcagctgtactattc
tcactggagtctgcaccagagaatgccagtctgttacctgctggacttctgatctggaaa
gtgaattcccaaaattcaggcagatttgactttaccgtgtctgatgagtgtaatgcacaa
agcacatattctgttcaggttgcagtgaaatcgtgtggctgcataaatggcggaacatgt
ggcacagatatcaatttccccccaggaagtggtgaataccactgtgtgtgtcctgtcggt
tttgaaggggagttttgtcaagaaaatgtagatgactgcaaatcaaatccatgcggtgtg
ggcacctgcatagataatatcaacagctactcctgtagatgtccagctggtcttacagga
cttacatgtcaagaagatgttaatgaatgtaagaaagcactgtgttttcccggcgtccct
tgtttcaatagctttggatcatataaatgtggaaactgcccaggcaagatgaagagtgat
ggccgatcttgcaaaggcttaaccaacagtctacggcgcataattacttgtgcaaataaa
ccctgcttcccaggagttcaatgttttgatcggaagccaccttatgttggttttgcatgt
ggccgctgtcctgctggattatttggcacggggcggacatgcatgaagattccacggttt
gtcaccccacatgttgcatccaaatttcagcatcattgggccgctaccacaagaccaagc
gacctgccagcgggtagccagaaaactactcttggacatgttcctgtgtctggcagaccc
acaatggagaaagtagttacaatagccaaagcacctccaattctcaagacagataggccc
tatgctgctttgagcttatctccttccatttcatccatctcatatggcactggcactcct
gccatgagttctcggactatatctcagctgactgcccatcccaaagctccacaaaaaaac
accactttttggcgacctgtcacctcatcactgcgggctgtaacagcatctcaagctctt
tccattactcacattggtaacgagttgattcctactgaaagaaaggtcacctgtgctgac
atgccttgctttaatggagtcccatgtgagccaacacagtttggaagctttaaatgtgga
cagtgcccttttggatacactggtgatggagtaacatgtaaagctatatgcaggtatccc
tgtggaaagaatatggaatgtgcagctcccaacacatgtcgctgtaagcctggctacact
gggtataattgtcatatagcaatctgtcgacctgactgcaaaaacagaggaaagtgtatt
aaaccagataagtgtgagtgccccccaggatacaatggcctgacctgtgaagacgccttc
tgcattccagcttgtgagcatggtgggtcatgtattaccagaaatacctgctcctgcctg
tatggatttgtgggaccaagatgtgaaacattggtttgcaatagacattgtcaaaatggt
ggaagatgcacttcaccagatgtgtgcaagtgtaaagctgggtggacaggaccctcatgt
gaaacagctgtttgctcccccatgtgcctcaatggtggcatctgtgttcggcagaatgtg
tgtatctgtcctcatggtttctatggactgcagtgtcagaatgccgtttgcaatcccccc
tgtaagaatggcggccagtgtatgagaaacaatttatgctcctgtcctgaaggctataca
ggacgaaggtgtcaacagagtgtctgtgagccattgtgtatgaacagagggaagtgtgtg
agtccgggtagttgtgactgtccatcagcgtggaaagggaaaagatgtaaccaaccgatc
tgtctacagaaatgccagaatggtggagaatgcatgggaccaagtacctgtcactgtcgg
gcaggctgggaaggaatgttgtgtcagatccctatctgtgagcagaaatgtttgtttgga
agtaaatgcatcaggccgaatgtgtgtgcctgcaggagaggatacataggattaggctgt
gcaagaaagcttccagtaggacgtggatga
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