Leucoraja erinaceus (little skate): 129699131
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Entry
129699131 CDS
T09122
Symbol
ttll4
Name
(RefSeq) tubulin polyglutamylase TTLL4
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
leri03037
]
129699131 (ttll4)
04812 Cytoskeleton proteins [BR:
leri04812
]
129699131 (ttll4)
Enzymes [BR:
leri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
129699131 (ttll4)
Cilium and associated proteins [BR:
leri03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
129699131 (ttll4)
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
129699131 (ttll4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-GeneID:
129699131
NCBI-ProteinID:
XP_055494778
LinkDB
All DBs
Position
7:complement(78478791..78575944)
Genome browser
AA seq
1095 aa
AA seq
DB search
MASPKSEECSTDPCSKNYCKTLSLNTKSFNIVQTQESRPSYSVAQHPLWEWDCYNVIVPV
RKPNTCSSPTHRVASQPYPSVVGGKSRVIMPGFHNSFHSNVLVSPFESSSIHDRTSHGYR
SYQKLESLGSRLGGLGNRTTPISYVNGFIHSIPSRAISCDSAISPISQHNNSHSAGGNAV
PAVKNNPGHGGKPTSLCRKPLLNTNAFMRPTSAKVPLYQKLDKGSKTALTNGTNEFGDME
NLAKHNGSSARGLAGSPIHGNVEVKGSHQSEHSYGNLKSAIKLTRSIPGDPEIKFNEAVK
RLSEDRLPKNNLHERCVTFSKETEGLSSHGIQLQNGLYNGTGGIFKRASPNLTAFKSEYV
YANCNLEPLVKESSAIKENAVASGNKTPVGVLSTNVRIQNQSPVGVPGPAGLQQVTDQTK
KRSSLSAPKMNISSLTLQIAAMQLRPASKAIKEAENSKNEDDSQGSDVDLEEEEFADGLE
EASSQDYDEESECSTLTDSSSTISMEGSTKLNFNDAMPESPDTKSVFDIGYTPSHEYKHQ
VPKPALIKSLFYDMPLIVYFGTPNEKIEQLPWELRKQMKWRMSNVTPIVVKNAVAKSHFK
ITKRSYDWMGCWGHHMKSPLFKTLREYQKLNHFPGSFQIGRKDRLWRNLLKMQLRFGKRE
FSFFPQSFILPHDIKLLKNAWADGSTKQKWIIKPPASARGIGIQVIHKWNQIPKKRPLLV
QKYLHRPYLIGNSKFDLRIYVYVTSYDPLRIYMFTDGLVRFASCKYSSSMKSLSNKFMHL
TNYSVNKLNAEYKPNSDGKLCQGHKWSLKALWLYLNQKGVKIEQLQEQMKDVIIKTIIAS
ESYVNSQVNLYVRNRYTCHELFGFDIMLDENLKMWVLEVNISPSLHSNSSLDVNIKGQMI
SDLLNLAGFIIPQKEDVTPNGTKSASASRPKSSDLTPDEKLKRVYYLSQKSPPKDFYSTL
LDILTPDDIRMLMESEDEYNRRGQFERIFPGLMSSRYLRFFEQPRYFNILLDLWEQKHGR
NRQTAIEMLQELSYRRVHLGSSVNPTHVWHPPKNMFIPKLDISQNGVCKSSRSQESRESP
QGTHMSLLQPLHQSS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcccaagagtgaggagtgttctacagacccctgttccaaaaactactgcaag
actttgagcctcaacacaaaatccttcaatattgttcaaacacaggagagcaggccatct
tattctgttgcccagcatccactatgggaatgggattgttacaatgtgattgtacctgtc
aggaaaccaaacacttgctccagcccaacccaccgcgttgcctctcaaccctatccttct
gtggtgggaggtaagagcagggtaataatgccaggtttccacaacagtttccattctaac
gtattggtcagcccttttgagtcctcctcgattcatgatcgaactagtcacggctacaga
tcctaccagaaactcgagtccctcggctcgcggctcggcgggcttggaaatagaacaacg
ccaatttcgtacgttaatgggttcatccattccatcccttcccgagcgatctcttgcgac
agtgccatttctccgatttctcagcacaataattctcacagcgcgggcggcaacgcagtg
cccgcggtcaaaaataacccgggtcacggggggaaacctacatcgctgtgtcgcaagccg
ctgctaaacacgaacgcattcatgaggccgaccagtgccaaagtgcctttgtaccagaaa
ttggacaagggctccaaaaccgctcttacgaatggcaccaatgagtttggagacatggaa
aacttggctaaacacaacggcagcagcgccaggggtctagccggaagccctattcacggt
aacgtggaggttaaaggctctcatcagagcgaacattcctacggtaacttgaagagtgcg
atcaagctcaccaggagcattcccggtgatccagaaataaaatttaacgaagcggtgaaa
agattatcagaagaccgccttccaaagaacaatctgcacgagcgatgtgtgactttttca
aaagaaactgaaggcttgtcttcccatggtattcaacttcaaaatggactgtacaacggt
actgggggaatattcaaaagagcatcgcccaatctcacagccttcaagtctgagtacgtg
tacgcgaattgtaatttggaacctctggttaaagaaagcagtgcgattaaagagaatgcc
gtggctagtggcaataaaacgccggttggtgttttgtccaccaatgtacgcatccagaat
caaagccccgtcggtgttccagggcccgctggcttgcaacaagtaaccgaccaaactaag
aagcggtcctctctctcggccccgaagatgaacattagttccctcacgttacagatagct
gccatgcagctcaggcctgcaagtaaagctataaaagaggcagaaaattccaagaacgag
gacgattctcaaggctcagatgttgaccttgaagaggaggagtttgccgatggcctggag
gaagccagcagccaggactatgatgaggagtctgagtgttccacccttacggattcctct
tctaccatttcaatggaaggttcaaccaagctgaattttaatgatgcaatgcccgagtct
cctgataccaagtctgtttttgatatcgggtacacaccatcgcatgagtataaacatcaa
gttcctaaaccagcattaattaaaagcctattctatgatatgcctttgatcgtatatttt
gggactccaaacgagaaaattgaacaattgccatgggagctaaggaagcagatgaaatgg
agaatgtcaaatgtaacaccaatagttgtgaaaaatgcagtggccaagtcccatttcaaa
attactaaaagatcgtacgattggatgggttgctgggggcaccatatgaagtcgccactg
tttaagaccctccgggaatatcagaagctgaatcactttccaggatcgtttcaaatcggg
cgcaaggatcgcctgtggcgtaacttgttgaaaatgcagttacgatttgggaaaagagag
ttcagcttttttccacaatccttcatcctccctcatgacatcaagctgttgaagaatgcc
tgggcagacggctctaccaagcagaaatggattattaaaccacctgcatctgcaagagga
attgggattcaagttattcacaaatggaatcagatccccaagaagcgacctctgctggtt
cagaaatacttgcacagaccctacctcattggtaacagtaaatttgatttaagaatatac
gtctatgtaacctcatatgatcctctgcggatatacatgtttacagatggcctggtccgt
tttgcaagctgcaagtattcatcttccatgaagagccttagtaacaaatttatgcatctc
acaaactacagtgtaaataaactaaatgcagaatacaagcccaacagtgatggaaagctc
tgtcaaggccataagtggagtcttaaggcgctgtggctgtatcttaatcaaaagggagtg
aagatcgaacaattacaggaacaaatgaaggatgtgatcattaaaacaatcatagcttct
gaatcttacgtgaatagtcaggtaaacctgtatgtaagaaaccgttacacctgccacgag
ctctttggatttgacataatgctggatgagaacttgaaaatgtgggttctagaagtcaat
atctcaccaagcctccattcaaattcctcattggatgttaacatcaaggggcagatgatc
agtgatcttctgaatctggctggatttattattcctcaaaaagaagatgtaactccaaat
ggcacaaaaagtgcatccgcatcaaggccaaagagcagtgatcttacaccagatgaaaaa
ctgaaacgggtctattacctaagtcagaaatcgccacctaaggacttctactccacgctt
ctggacattcttacccccgacgatattcggatgttaatggaatcggaggacgagtacaac
cgccggggacagtttgagcggatcttccctggcctcatgtcctcgcgctatctccgattc
tttgagcagccccgctacttcaacatcttgctggacctgtgggagcaaaagcatggccgg
aacaggcagacagcaattgaaatgttgcaagaactgagttatcggagggttcatctgggg
tcgtccgttaatcctacacacgtctggcatccacccaaaaatatgtttattccgaagttg
gacatcagccagaatggagtgtgtaagtcatctcgttcccaagagagccgtgagtcccca
caaggcacacacatgagtctcctccagccactgcaccaatcatcctga
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