Leucoraja erinaceus (little skate): 129699258
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Entry
129699258 CDS
T09122
Symbol
nup133
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129699258 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129699258 (nup133)
03036 Chromosome and associated proteins [BR:
leri03036
]
129699258 (nup133)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129699258 (nup133)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129699258 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
129699258
NCBI-ProteinID:
XP_055494861
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All DBs
Position
8:3341962..3400919
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AA seq
1156 aa
AA seq
DB search
MFSPRAPAGTRRPPGSCYGSPRGPGGPGGGGGGFTVQGRRSLSAGATGVLSPAWRATLCS
RSTPTRGAQYQTVAETLNYEIRSFGSSLPVKVMEAITLAEVDEPLSVKISENGWAWLVCG
EKLIVWKIGQMSVAKLSVCKEFHLPPCDLPYVADLVALSHPNEHTSSQCVSVMAASRRGT
ICYWPSLTHEESCTEITVDFNSAEWKCLTSVTVGGFILASQKNQLLRLTPDGSGRVSSAP
VQQGQGMLSGLGRRVSSLFGILTPTANDVLSSVLWDEENECLYTLTNSSLDKWEVDETSE
RHVFSWDLNRSMKGDLGNYIWGADENYETDKSGINVQYLDLQLSKEGLVVLMAAWSQGDS
PCLIYYVLGTVQDNGYRITDEIRMEVTEYHPLYQPDEEIPCRRFLIPDYSNPAAYLYTYD
MVFAGSTGTGRAGLPQEKINLNMPGDGILGGGRFAGYPVLFCRNSGLVAARPKESVSMLP
ENIEDSLALSTSGAAAQGDVGQPFERTAAEPQEDKIKMLKTAFVMYCRKDIVAAQAMLGD
IFPENADLRSDSELDGAVAQISLDLINDYPACDPRWAESVPNDGNRFSNTSLLLLHQLED
KMKAHYCLMEFLRDMELLNRLDTVSVRGFLTATRLLLCEHAEKLSAALVLKNYHTKLPDL
VNAAINSALGKQKKSVSQNLTAADVFFREVSQIDTAFESLLEEEENILEENDPVSLEWAQ
VAVNVNNILKDMLHAAVHHRHNKSSLYKSEEDAEREPEYIPWTASSGPSGVRNVIVRQTD
IVLNKVYPQVDSSLRNTLLDQLVVLLDFYLDGYVCQLKSVDRPSQQDRYNTLDLEYTQKR
SQLLAQLLSLKQHQLTASLAEKYCDFDILIQLCEQTDNQARLQHYLNQFADQNFSDFLFR
WYMEKGKRGKLLCPPVAQHAQLAHFLQSHQHLSWLHEINIHNFDKAHQTLLNLANMELRY
FAKKKTLLSLSKLSAFASDLPEDRLRERMEELNAQERYLLHQDTLPMELMERKQLNTDTM
PVLSASQLIHLYIGDDNIRANDYDFKKALDLLEFVEKEDNLVADVGVDALKLEIFSRAIQ
KDDWSFSPTDDPVEAAKETMLIKVIEKLMDEGVELKDYLPEIKDLLLSDHLDTLRSNSYF
EFLLQANYEHYMKAQS
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaccgcgggcccccgcaggcaccaggcggcccccgggcagttgctacggatca
cctcgcggcccaggcggtccaggcggcggcggcggcggcttcacggtgcagggccggcgg
agcctgtctgcgggcgcgaccggcgtcttgtccccggcctggcgcgccacgctttgcagc
cgttcaacaccaaccagaggagcacaatatcaaactgttgccgagaccctcaactatgaa
ataagaagttttggatcatctcttcctgtgaaggttatggaggcgataactctagccgaa
gtggatgagccattaagtgttaaaattagtgaaaatggatgggcatggcttgtctgtggt
gaaaagctaattgtctggaagattggccagatgtctgttgctaagctgtctgtatgtaaa
gaattccacttgccaccttgtgacctcccttacgttgcagacctggtggctttatcacat
ccaaatgaacacacttcctcacagtgtgtgtcggtgatggcagcttccaggcggggtaca
atatgttattggcccagtttgacccatgaagaatcttgtacagaaattactgtggatttt
aacagtgctgagtggaagtgtctgacttctgtaacggtaggtggatttattcttgcttcc
caaaagaaccagttgctgcgattaacaccggatggttcgggaagagtgagctccgccccc
gtgcagcagggacaggggatgctctcgggactgggtcgcagggtctcttcactctttggc
attctcacccccacagccaatgatgtgttaagctctgtactgtgggatgaggagaacgag
tgcctctataccctgactaactctagcctggacaaatgggaagtggatgagacatctgaa
cggcatgttttcagttgggacttaaaccgatccatgaaaggagacctgggaaactacatt
tggggagctgatgaaaattatgaaaccgataagtctggaatcaatgtgcagtatctagat
ttgcaactgagcaaagagggtctggtggttttgatggcagcttggagccagggagactct
ccatgcttaatctactacgttttaggcactgtccaagataatggatatcgaataactgat
gaaattagaatggaggtcactgagtatcatcctttataccagccagatgaggagatccca
tgccggcggtttttgataccagattactcaaacccagctgcatacctctatacatatgat
atggtctttgcaggttccactggaactggacgagctggtctacctcaggagaaaatcaac
ttgaatatgccaggtgatggtatcctaggtgggggaagatttgctgggtatcctgtccta
ttctgcaggaacagtggtttggttgctgctcgccccaaggaaagcgtgtcaatgctacct
gaaaacattgaagattctctggctttatctacctctggagcagcagcacagggtgatgtt
gggcagccatttgaaagaactgccgcagaaccacaagaggataaaattaagatgctgaaa
actgcctttgtgatgtattgcagaaaggatatcgttgctgcccaggcgatgttgggggac
atcttcccagaaaacgcagatctgagatcggactctgagcttgatggtgctgtggcacaa
atcagtttagatctgatcaatgactacccagcgtgtgatccccgctgggctgaatccgta
cccaacgatgggaatagattcagcaacacctctttgctgttgcttcatcaactggaagat
aaaatgaaggctcattactgtttgatggaatttcttcgggatatggagctactgaatcgg
cttgatactgtttcggtgcgaggattcctcacggcaactcgccttttactttgtgaacat
gctgagaaactctctgctgcccttgttctaaaaaactaccacaccaagcttcctgacctc
gtaaatgcagcgattaattctgctctgggtaagcagaaaaagagtgtttcacagaacctg
acagcagcggatgttttcttcagagaggtctcccagatcgatacagcatttgaatcgttg
ttggaggaagaagaaaatattttggaggagaacgatcccgtctccctggagtgggctcaa
gtagctgtcaatgttaacaatatcctgaaggatatgttgcatgcagcagtgcaccatcga
cacaacaagagttcattgtacaagtcagaagaggatgcagaacgggagcccgagtacatt
ccttggacagcttctagtggtccatctggtgtgaggaatgtgattgtaaggcagactgat
atcgtgctgaataaagtatatccacaagttgacagctccttacgtaataccctcctggat
caactggtagtgctgctcgacttctatctggatggctatgtttgtcaactcaagtcagtg
gacagaccttcacagcaggatagatacaataccctggacttggaatacacccagaaacgt
tcacaacttctcgcacaattactttctctcaagcaacaccagctgaccgcttccctggca
gagaaatattgtgactttgacattctgattcaactttgtgaacaaactgacaaccaggca
agactacagcactacctaaaccagtttgcagatcagaacttttccgacttcctgtttcgc
tggtacatggaaaagggaaaaagagggaagctgctgtgcccgccagtggcccaacatgcc
cagctggctcatttcctgcagtcgcaccaacacctcagctggctgcatgagatcaacatc
cacaactttgataaggctcatcaaacattactgaatcttgctaacatggagttacgatac
tttgcaaagaagaaaactctcttgagcctcagtaaactctctgcatttgcttctgatctc
cctgaggaccgtctgcgtgagaggatggaggaattgaatgcacaagaacggtatctgctt
catcaggatactctcccaatggagctgatggaaagaaaacagctcaacactgacaccatg
cctgtgttgtctgcttcacaactgattcatctttacatcggtgatgacaacataagagcg
aatgactatgatttcaagaaggcacttgatctattggagtttgttgagaaggaggacaac
cttgttgctgatgttggtgttgatgcactgaaactggagatcttcagtcgagctatccag
aaagatgattggtctttcagtccaacggatgatcctgttgaagctgccaaggagaccatg
ctgataaaagtaatagaaaagctcatggatgaaggcgttgagctgaaagactacttgcca
gaaataaaggacttgctgttgtcagatcatcttgatactctgagatccaattcgtatttt
gaattcctcttgcaagcaaactatgaacattacatgaaagcacaatcttaa
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integrated database retrieval system
