Leucoraja erinaceus (little skate): 129699297
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Entry
129699297 CDS
T09122
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
129699297 (gpcpd1)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
129699297 (gpcpd1)
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
PI-PLC-X
TreTu_C
Motif
Other DBs
NCBI-GeneID:
129699297
NCBI-ProteinID:
XP_055494937
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All DBs
Position
8:9898880..9945247
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AA seq
689 aa
AA seq
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MGTSRVTFKIKGTTLPGEVFAVCGNSTALGNWSCQKALFLDPTADDEITWTATVNLPRAI
HFKYRYFKCYFIEPKNPADLRQVLVNKWETHPHPRSFKPSGEECILDDGNFGIHNDIEKL
DSGWLTCQSEIRLRLHYSEKPPVSISKKKFKKSRFRVKLTLEGFEEEGEEGEDDDKPVTT
LAEKIANTLEIALISNNGYRSRHSQPECGYALEPGQWTEYSIQTMEPDNLELIFDFFEEE
LGVAVVKGDPLPGHVGSACLLSSTIVDKSSGLITLPIMSRNSRKTLGKVKVDYIVIKPIE
GFICDMSPSLSKYWKPRMPLDVGHRGSVNSTSATLAKVRENTIASFKNAASHGAAFVEFD
VHLSKDHVPIVYHDLTCCISMKKKMDKESSELFEIPVKELTFEQLQLLKLAHVAALKVND
DKENLDDENDVSENQPFPSLQQVLLCVPENIGYNIEIKWPCQQKDGVWEGNLPTYMDMNK
AIDIILKCTLENASNRRIVFSSFVADVCSMIRQKQNKYPVLFLTQGYTNSYPEFMDLRCR
TTPIAMSFAQSENLLGVNVHTEDLLRNPDYIQQAKSKDLVIFCWGNDTNESENRRILKQK
GIDGLIYDRICDFILGQADFFEVEELDELTQQLPDEAFVDCSCPDINHFACQSVPESNVS
GNSYPSEIKSSEQEMYSTESDSGQSCSSF
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgggcacttcaagggtcactttcaaaataaagggaactacacttccaggtgaagtgttt
gcagtatgtgggaattcaactgcgcttggcaattggtcgtgtcagaaagccttgtttctc
gatcccacggcagatgatgaaataacatggactgcaacagttaatcttccaagagccatt
catttcaaatatcgatacttcaaatgttattttattgaacccaagaaccctgctgatctt
cggcaagtgctagtcaacaagtgggagactcatcctcatccacgatcatttaaaccgtcg
ggagaggagtgcatattggatgatggaaactttgggatccacaatgacattgagaaattg
gattctggctggttaacatgccaaagtgaaattcgcttgaggttgcactattctgaaaaa
cctccagtttccatatccaaaaagaagttcaagaaatcaagatttagggtgaaattgaca
ttggagggatttgaagaagagggtgaagaaggtgaagatgatgacaaacctgtgactacc
ttagctgagaaaatcgccaatactttagaaattgccttaatcagcaacaatggatacagg
tcacgtcactctcagccagaatgtggctatgccttggaacctggccagtggacagagtat
agcattcaaactatggagccagataacctggagctaatttttgacttctttgaggaagag
ttgggcgtagcagtggtgaaaggtgacccacttcctggtcatgtcggctctgcctgtctt
ctctcttctacaatagtagacaaatccagtggacttatcacgcttcctatcatgagcaga
aattcgagaaagactcttgggaaagtaaaagttgactacatcgttattaagcccatagaa
gggtttatttgtgatatgtctccttcactgtccaagtactggaaaccaagaatgcccttg
gatgttgggcacaggggttccgtaaactcaacatcagcaaccctcgcaaaggtcagagaa
aacacaatagcttcctttaaaaatgccgctagtcacggtgctgcctttgtagaattcgat
gtacatctttcaaaggaccacgttccaattgtataccatgatctcacctgttgtatatca
atgaaaaagaaaatggacaaagaatcttcagaattatttgaaattccagtaaaggagctt
acatttgaacagttacaattattaaagttggctcatgtggctgctttgaaggtgaatgat
gataaagaaaatttggatgacgaaaatgatgtttcagaaaaccagccatttccttccttg
cagcaggttttattatgtgtgcctgagaatattggatacaacattgaaattaaatggccc
tgtcaacaaaaggatggtgtgtgggagggcaacttgccaacatatatggatatgaataaa
gccattgatataatcttaaaatgtactttggaaaatgcttctaatcgaagaatagtgttc
tcctcattcgttgctgatgtctgctctatgatcaggcagaagcaaaacaagtatccagtt
cttttcttgacccaaggctatactaatagctatcccgagtttatggatctccggtgtcga
accacgccaattgcaatgagttttgcacagtcagaaaaccttctgggagtcaatgttcat
acagaggacttgttgcgaaatccagattatattcaacaagctaaatcaaaagatttggtc
attttttgctggggtaatgacaccaatgagtcagaaaataggagaatattgaaacagaaa
ggaattgatggcctaatctatgacaggatctgtgacttcattctggggcaggccgatttc
ttcgaagttgaggaattagatgaactgacgcaacagttgccagacgaagcctttgtcgat
tgctcttgtcctgatatcaaccactttgcctgccagtcagttccagagagcaacgtcagt
ggaaactcctatccaagtgaaattaaaagcagtgagcaggaaatgtacagcacagaatcg
gactctgggcaaagctgcagttcattttga
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