Leucoraja erinaceus (little skate): 129699349
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Entry
129699349 CDS
T09122
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129699349 (stxbp5a)
Membrane trafficking [BR:
leri04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129699349 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
129699349 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
Beta-prop_RSE1_2nd
WD40_like
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
129699349
NCBI-ProteinID:
XP_055495012
LinkDB
All DBs
Position
8:complement(15419931..15655578)
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AA seq
1190 aa
AA seq
DB search
MKKFNIRKVLDGLTAAAAASASSSSSSSQQPGQRPADSDIVESLCSEHFQLCKTVRHGFP
YQPSAMAFDPVQKILAIGTQSGSLRLFGRPGVECYCQHDSFAGVIQLQFLINEGALVSAL
ADDTLHLWNLRQKRPAILHSLKFNKERITFCHLPFQSKWLYVGTERGNVHIVNVESFTLS
GYVIMWNKAIELSSKSHPGLIVHISDNPMDEGKLLIGFESGTLVLWDLKSKKGEYRYSYD
EAIHSVAWHHEGKQFVCSHSDGSLTVWNVRSPIKPAQIITPHAKQPKDGKKPESCKPILK
VEYRTCKSGDPFIIFSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYAS
DFQDPFAVVVLLEKDLVVVDLGQNGYPIFENPYPLDIHESPVTCCEYFADCPVDLIPALY
YVGAKQKRQGYSKKEWPINGGNWGLGTQSYPEIIITGHADGSLKFWDASAITLQVLYKMK
TSKVFEKSRNKEEKPFTDIVDEDPYAIQIISWCPESRMLCVAGVSAHVIVYKFSKQEVTT
EVIQMLEIRLHYEINDLESPETDQTPTVGISCQGSNSQTANSQSHPSTSSTSSDGLRDNV
PCLKIRSTPLKQAAGYQAEVVIQLVWVNGEPPQQITSLAVNSSYGLLVFGNCNGIAMVDY
IQKTILLNLGTIELYGSNDPYQRQPKSPRKARQASGGLCDINESSTVLDDHCKSPTSGSA
SSCNSEDDQKLPNFIEKVKIKSRKLSKIVVSDIAKMSRKLSLPTELKPDLELGVESKNRA
QGINHHLEKRQLKNHGWSMTSLYMHFTHVKDNSFSRSRSSSVTSIDKESREAITALHFSE
TYTRKADTCTSPCLWVGTTLGTVLVIVLNLPPGGEQRLTQPVIVSPSGTILRLKGAMLRM
AFLDTTGSLIHPAHDPWKEPNIQEEKDEKDKCRKLRPVSVSPSSSQEISETQYAVICSEK
QAKVISLPSQNCVYKHNITETSFVLRADIVGLNGSTCLACFCANGHIMTFSLPSLRPLLD
VNYLPLTDMRIARTFCFTNNGQALYLVSPTEIQRITYSQGTCENLQEMLGELFTPVETPD
APNRGFFKGLFGGGAQSLDREELFGESVAGKASRSLAQHIPGTGGIEGVKGAASGVAGEL
ARARIALDERGQKLSELEERTAAMLYSADNFSKHAHEMMLKCKDKKWYQF
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacggcctgacggcggcggcggccgcctcg
gcctcctcctcctcgtcgtcgtcgcagcagcccggccagcggcccgccgacagtgacatc
gtcgagagcctgtgctccgagcacttccagctctgcaaaacggttcgtcatggatttcca
tatcaaccttcggccatggcttttgatccagtgcagaaaatcctggctattggaacccaa
tctggatcattaagactcttcggaagaccaggggtggagtgttactgccagcatgacagt
tttgcaggagtaatccaactgcagttcttgatcaatgaaggagcccttgtgagtgccttg
gcagatgataccttacatctctggaatctgcgtcagaaaaggcctgccatactccattct
cttaaattcaacaaagaaaggataacattttgccatctgcccttccagagtaaatggttg
tatgttggcacggaaagagggaatgtacatattgtcaatgtggagtccttcacactctca
ggctatgtcattatgtggaataaagccattgaactatcatcaaaatcccacccgggcctc
attgtccacatcagtgacaacccaatggatgaaggcaagcttttaattggttttgaatct
ggaactttggtgttatgggacctcaaatcaaagaagggagagtacagatacagctacgat
gaggctatccattccgtggcttggcatcatgaaggaaaacaatttgtttgtagccattca
gatggcagccttactgtctggaatgtaagatctcccattaaacctgcacagattattaca
ccacacgcaaagcagccaaaagatggaaagaagcccgagtcctgcaaacccatcctgaaa
gtggaatatagaacatgtaaatctggagatcctttcatcattttttcagggggactgtcc
tatgatacagtaggtagaagaccatgcttgacagtgatgcacgggaaaagcactgcagta
cttgaaatggactatccaattgttgactttctcaccctttgtgaaacaccatatgcaagt
gattttcaggatccatttgcagttgttgtccttctggaaaaggacttggtagtcgtagat
cttggacaaaatggttatcctatatttgagaacccttaccctttggacatacacgaatcg
cctgtcacctgctgcgaatattttgctgactgccctgttgacctaattcctgcactttat
tatgtaggggcaaagcagaagcggcaaggatacagtaaaaaggaatggcctatcaatgga
ggtaattggggtttgggtacccagagctacccagagataattattacagggcatgcagat
ggatcactgaagttctgggatgcttcagctataacgttacaagttttgtataagatgaag
acatccaaagtatttgaaaaatctcgaaataaggaagaaaaaccattcacagatatagtg
gatgaagatccttatgccatccagataatctcatggtgtcctgaaagccgaatgctttgt
gtggcaggagtatcggcccacgtaattgtttacaaattcagcaaacaggaagtgacaaca
gaagttatccagatgcttgaaatacgattgcattatgaaataaatgatcttgaatcaccg
gagactgatcaaacaccaacagtaggaatttcatgccaggggtcaaattctcagactgca
aactctcagtctcacccttctacaagcagcacgtcttcagatggcctccgtgataatgtg
ccctgcctaaaaattagaagtactccattaaaacaagcggcaggttaccaagctgaagta
gtcattcagctagtttgggttaacggtgaacctccacaacagataaccagccttgcagtc
aattcatcatatggacttttggtgtttgggaactgtaatggtattgcaatggttgattac
attcagaagactatacttttaaacctgggcacaattgaactctatggttcgaatgatcct
tatcagaggcaaccaaagtccccccgcaaagcccgacaggcctcaggaggtctctgtgat
atcaatgagagttctacagttctggatgaccactgcaagtctcccacatcaggttctgct
tcctcgtgcaattctgaagatgatcagaaattgcctaactttatagaaaaggtgaaaatc
aaaagcagaaaactttccaagatcgtagtatctgacatagcgaagatgtcgagaaaacta
agcttgccaactgaactgaagcctgatttagagcttggagttgagtcaaagaacagagcc
caaggcattaatcatcacctggaaaagaggcaacttaaaaatcatggttggagtatgact
tctctgtacatgcatttcactcatgtgaaagacaactctttcagccgttcccgcagttcc
agtgttaccagcattgacaaggagtcccgagaggccatcactgctcttcacttctctgag
acttatactcgaaaggcagacacgtgcacctcaccttgtttgtgggttgggacaactctt
ggcaccgtactggtgatagtactgaatctgccacctggtggagaacaaagacttacccag
ccagtcattgtatctcctagtgggactatattgagactaaaaggagcaatgttgcgaatg
gcattcttggacaccacaggaagtctcatccatccagcacatgatccttggaaagaacca
aatattcaggaggagaaagatgagaaagataaatgtaggaaactgagacctgtatctgtc
tccccttcatcctctcaggaaataagtgaaacccaatatgcagtgatatgttcagaaaag
caggcaaaggttatctcactgccatcccaaaactgtgtttataaacacaacataactgaa
acatcgtttgttcttcgtgctgatattgtgggactgaatgggagcacctgccttgcatgc
ttctgtgccaatggacatatcatgacattcagcttgccaagtcttaggccactgctggac
gtcaattatttgccactgaccgatatgcgaatagctcgtactttctgtttcaccaataac
gggcaagctctatatctggtttcacccactgaaatccaacgcatcacctatagtcaggga
acatgtgagaatttacaggaaatgctgggagagctgtttacccctgtggaaacaccagat
gctccaaacagggggttctttaaagggttgtttggtggtggtgcccagtcactggacagg
gaagagctttttggtgaatctgtagcggggaaagcctcgaggagcttggcccagcacatc
ccagggactggtggaattgaaggggtcaaaggagcagcatctggtgttgcaggagagctg
gcaagggccaggatagcactggatgaaagagggcagaaactaagtgagctggaggagcga
acggcggccatgttatacagtgccgataatttctctaaacatgctcatgagatgatgtta
aagtgcaaagataagaagtggtaccagttctga
DBGET
integrated database retrieval system
