Leucoraja erinaceus (little skate): 129699466
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Entry
129699466 CDS
T09122
Symbol
smyd3
Name
(RefSeq) histone-lysine N-methyltransferase SMYD3
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00310
Lysine degradation
leri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129699466 (smyd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129699466 (smyd3)
Enzymes [BR:
leri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
129699466 (smyd3)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
129699466 (smyd3)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129699466 (smyd3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
TPR_MalT
TPR_NPHP3
TPR_10
Motif
Other DBs
NCBI-GeneID:
129699466
NCBI-ProteinID:
XP_055495257
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All DBs
Position
8:complement(27342304..28088083)
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AA seq
430 aa
AA seq
DB search
MARYLQRGSCGHRGEGLRATTTLAPGHLLYSASPYACIPSKKARGSICEHCFCRKESLLR
CSQCKMARYCNATCQKLAWPEHKCECKCLRSIYPQVPTDMVRLVAKIIFKLMTGSCSSEE
LYCVTDLQSNIKQMSEEMKEGLGQLAVMLQFYMKEEIHDVSQLVPGLNLLHLFGQVMCNC
FTISDGEMQEVGIGLYPSMSLLNHSCDPNCVMVFEGKLLRLRAVQQIQQDEELTISYIDV
MATSQERQRQIEKQYCFVCDCKHCETGHKDVDRLAGEECCWTKAKELIPKVEELQAAAKW
EQLVDTCQPFTSKSQDVLPDTNLYLLKMLDATMDACIHVARWEEALCYGLRTLHPYQLYY
AGPHPVRGIQLMRVGKLQHHQGKLSQALDTLKQAFDILKVTHGREHPLTDNLRQLLADCE
AELSSRLEHM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctacttgcagaggggcagctgtgggcatcggggagaaggactgagggcgacc
acaactctcgcccccgggcacctcctctattccgcttctccttatgcttgcattccctcc
aagaaagccagaggatccatctgtgaacactgcttttgcaggaaggaatctctgctgcga
tgttctcagtgtaagatggcaagatattgcaacgccacgtgccagaaactagcttggcca
gagcacaagtgtgaatgcaagtgtttgagaagcatttatcctcaagttccaactgatatg
gttcggcttgttgcaaagataatctttaaattgatgactggctcctgctcatcagaagaa
ttgtattgtgtgacagatcttcagtccaatatcaaacagatgagtgaagaaatgaaagaa
ggccttgggcaacttgcagtcatgctacaattttatatgaaagaggaaattcacgatgta
tcccagctggttcctggtttaaatctgcttcacctctttggtcaagtgatgtgcaactgt
ttcaccatcagcgacggcgagatgcaggaagttggtatcggcctctatcccagcatgtct
ctgctgaaccacagctgtgacccgaactgtgtgatggtctttgaagggaaactgctccgg
cttcgggccgttcaacagattcagcaggatgaagagctgacaattagctacattgatgtc
atggcaacaagccaggagcgacagagacagatcgagaagcagtactgttttgtgtgtgac
tgcaaacactgtgagactggacacaaggatgtggatcggctggctggagaggagtgctgc
tggaccaaggccaaggaattgattccaaaagtggaggaattacaggctgctgcaaagtgg
gagcagcttgtggacacctgccaaccgtttacaagtaaaagccaagacgtccttccagac
acaaacctctatctgctgaagatgctcgatgccactatggatgcttgcattcacgtcgct
cggtgggaggaggccttgtgttatggcctgaggactctgcatccctaccagttgtattat
gctggtcctcaccccgtgagaggaatccagctcatgagagtgggcaagctgcagcatcac
caagggaagctgagccaagcactggacacgctaaagcaggcttttgacattctgaaggtg
acccatggaagagaacatcccctgactgacaacctgcggcagctccttgcagactgcgag
gctgaactcagcagcagactggagcacatgtga
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