Leucoraja erinaceus (little skate): 129699622
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Entry
129699622 CDS
T09122
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129699622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129699622
03036 Chromosome and associated proteins [BR:
leri03036
]
129699622
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129699622
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
129699622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
129699622
NCBI-ProteinID:
XP_055495559
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Position
8:complement(43089180..43179386)
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AA seq
1203 aa
AA seq
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MSGDQITTLCEQLMKAVNVIMDGGSSSRYRLEALKFCEEFKEKCPHTVQCGLRLAEKNNT
GIVRHFGLQILEHSIKFRWNGMVHRDKVQLKNSVMTLLSRGTHNIMVEEAYIKDALSRIV
VEMIKREWPQQWPDMLNEMDKLTAMGETQTELVMLILLRLVEDVVTFQTIPAQRRKDIQH
ALTQNMMQLFSFLLDILQEHTQNYKQLKADTTQENKAKAHCRVAIATLSTLAGYVDWVAL
HHITADSCKLLEVLCMLLTEPELQLEAAECLLIAISRKGKLEDRKPLLVLFSDAAMHCIL
SAAQTAHGAGLVEQHYMFLKRLCQVLTALGGQLTALWGSDKDVCQPPNFNKYLQAFLAFT
NHPSQYLRSSTQIAWCSFLRYEHVSKDPVLLDVIPQLLHATMANLLKVGFPSKSDSPSCE
YSRVDFDNDEDFNAFFNSFRAQQGETIRLSCRLSPMTGFNMASEALQYQLTAIIDVGPTM
SKTGKGLCSIFSPSFVQWDALTFFMESVMSQLFRTMEPEHLPVADGIELLKAVLSYQTHD
PLILSCILTAVSTLSPFLLHNATVLPQVLEKLFASATFEVVEESQAPRTRAVKNVRRHAC
SSILKMCRDHPELIMPVFEMFYAHVKRLQQDERQLTQLEKCALMESLVLLSNQFKDYARQ
KAFLEELMAPVTNLWLSAEMHSVLSDPAMFLSYIGADVTPDDPIREDPAGINRSRISLCV
YTILGVVKRARWPSDLEEAKAGGFVVGFTPSGAPIYRNACTEHVIKLLDNLLALIRTHNN
LWLPEMMAQLSPHFMKAHDMLEVEKNAILGIPQPLLDHADAPVYKSVLERMQGFFCTLYD
NCFHILGNAGPSMLQDFFAISNFAESVINSAFVNLENIPDYRLRPVLRVFVKPLVQSCPP
EHYETVLCPILGPLFSYLLQRLSGKWVVINQRGLLEAESGGPEENPESQEMLDEQLTRLL
TRESIDLMTVCCCVKKGPETMPGDMDDDEMMNTNDGPHVGSEELTDLGKCLLKSEEICKA
LLATAYSAVIWNDTITCQRATLQLCWPLIKQVLSATLHSDATSWFFMSVLRGLQMHGQHE
GCLAALVNLAFMIYEALRPRYPELKTVMQQVPQISGDALDQFDSKLLNPSSHKMGDKRRK
DLFKKLLSGCIGKPLGQKFKKEVHIKNLPTLFKKPKPQPTTPIEETNEDNILAPLFDPRA
QDI
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgatcagatcacgacgctgtgcgaacagttgatgaaggcggtaaacgtgatc
atggacggaggctcgagttcgcgctaccggctggaggccttgaagttttgtgaagagttc
aaggagaaatgtccgcacacggtacagtgtggactacgtcttgctgagaaaaacaatact
gggatagtccgccactttggacttcagattctggaacattctattaaatttcgatggaac
ggcatggtacatcgtgataaggtgcagctgaaaaacagtgtgatgactcttctttcacgt
ggtactcataacatcatggtggaagaggcttacatcaaagatgccctttcccggattgtg
gtagaaatgatcaagcgagagtggccacagcaatggccagacatgttaaatgagatggat
aaattaactgctatgggagaaactcaaacagaactggtaatgttgattctactgcgcctg
gtggaagatgtggtaacttttcagactatacccgctcagaggcgcaaggacattcagcac
gcactgactcaaaatatgatgcagctcttcagttttcttttggatatcttgcaggaacac
actcagaattacaaacaactgaaagcagatactactcaagaaaataaggctaaggcacac
tgtcgtgttgcaatagcaactcttagtaccctggctggatatgtcgactgggttgctttg
caccacatcacagctgatagctgcaagctacttgaagtgctgtgtatgttattaacggaa
ccagaattgcaactagaggctgcagagtgtctgcttattgccataagcagaaagggaaag
ctagaagatcggaaacctctcctcgtccttttcagtgatgctgccatgcactgtatttta
tcagctgcacagacagctcatggagcagggcttgtggaacaacactacatgtttcttaaa
agactttgtcaagtacttaccgccttgggaggacagctgactgcactgtggggtagtgat
aaagatgtctgccaacctcctaatttcaacaaatatttacaagcattcttggcattcact
aatcaccccagtcagtatttaagatcttcaacccagatagcttggtgctcatttttaaga
tatgagcacgtctccaaggatcctgttttgctggacgttatcccacaattgttacatgca
acaatggcaaaccttctgaaggttggttttccttccaagagtgacagcccaagctgtgaa
tattcccgtgtagattttgacaacgatgaggatttcaatgcatttttcaattcattcaga
gctcaacaaggagaaaccatccggctctcttgccgtctttcaccaatgactggattcaac
atggcttcagaggcactacaatatcagcttactgcaatcattgatgttggtccaaccatg
tctaagactggcaaaggactttgttctatattttcgccatcttttgtgcaatgggatgcc
ttgaccttcttcatggagagcgtgatgagccagcttttccgaacaatggaacctgagcac
cttccagttgcagatgggattgaacttctgaaagctgttttaagttatcaaacccatgat
cccctcatcctgtcttgcatcctgacagctgtgtccacactttctcccttccttctccac
aatgccacagttctgccacaagttcttgaaaagctctttgcatctgcaacgtttgaagtg
gttgaggaaagccaggcgccaaggactagagcggtaaaaaatgttcgccgccacgcttgt
tcatctatactcaagatgtgcagagatcacccagagctgattatgccagtctttgaaatg
ttctatgcccatgtcaaacgtctgcaacaagatgaaaggcaactgacacagttggagaaa
tgtgctttaatggaatctcttgttctcctgagcaatcagttcaaggattatgcaagacag
aaagctttcctggaggagcttatggcacctgtcaccaacctttggttgtctgcggagatg
cacagtgtgctgtccgatccagcaatgtttctttcatacattggcgcagatgtcactcca
gacgatccaattcgagaagatccagcaggcatcaatcgatctaggatcagcttgtgtgtg
tacaccatacttggagttgtgaagcgggctcgctggcctagtgacctggaggaggcaaag
gccggagggttcgtggttggattcacacccagcggggctccgatctaccgcaacgcctgc
actgagcatgtcatcaaacttcttgacaacctgctcgccctgataaggacccacaacaac
ctttggctgccagaaatgatggcccagctcagcccacacttcatgaaagcccatgacatg
ctggaagtggaaaaaaatgctatccttggtattccacagcctttgctagatcatgctgat
gctccagtctacaaatctgtgctggaacgaatgcagggattcttctgtaccctgtatgac
aactgttttcatatcctcgggaatgctggaccaagcatgcttcaagactttttcgccata
agtaattttgcggaatctgtcataaattctgctttcgtgaatctggagaatattcctgac
tatagactccgtccagtgctccgtgtctttgtgaagcctttggtccagtcctgtccaccc
gaacattatgaaacggtgctgtgcccaattcttggacccctattctcctatttactgcag
agactgagtggcaaatgggttgtcatcaaccagagaggccttttggaggctgaaagtggt
ggtcctgaggagaatccagaatcccaagaaatgttggatgagcaactaacacgccttctc
acccgtgaatccattgatctaatgactgtgtgttgttgtgttaagaagggcccagaaact
atgccaggggatatggatgatgatgaaatgatgaacacaaatgatggtccacatgttggg
tctgaagaacttactgacctaggaaagtgcctgctcaagtctgaggaaatttgtaaagca
ttgttggcaactgcttacagtgctgtgatttggaatgacaccataacgtgccaacgagca
actctacaactctgctggccattgatcaagcaggtattgtctgcaactctacattctgat
gcaaccagttggtttttcatgagtgtacttcgagggttgcagatgcatgggcaacatgaa
ggttgccttgcagcattggtcaatcttgctttcatgatatatgaggcactgagaccacgt
tatcctgaattgaaaacagtaatgcagcaagttcctcaaatctctggtgatgctttggat
caatttgattcaaaacttctgaacccatcatctcataaaatgggcgataaaaggagaaag
gatctcttcaagaaactcttgtctggctgcattgggaaaccacttggacagaagttcaaa
aaagaagtgcatatcaaaaacttgcccactcttttcaagaaaccaaaaccacagcctact
acaccaatagaagaaacgaatgaagataatattcttgctccactctttgatccaagagct
caggacatataa
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integrated database retrieval system