Leucoraja erinaceus (little skate): 129699739
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Entry
129699739 CDS
T09122
Symbol
dtl
Name
(RefSeq) denticleless protein homolog isoform X1
KO
K11790
denticleless
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129699739 (dtl)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129699739 (dtl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
ANAPC4_WD40
NBCH_WD40
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
129699739
NCBI-ProteinID:
XP_055495749
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Position
8:complement(58268012..58299031)
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AA seq
709 aa
AA seq
DB search
MRMLFRTVQSSRVCNSKREPHSYPLETLLQYYQCNRHDEHTSSGDLGVPVPPFGCSWSTA
EQLQWVLAVVNEEGVVRLYNTECHKKKDPIFRAWLAHTNAVFDLAWVPGEPKLVTASGDQ
TAKLWDVRVSELLGTFKGHQCSLKSVAFGKQETAVFCTGGRDGNIMVWDTRCSKKDGFYR
QVKQITGAHNSQAKQTPPKQKKRRPTARGLAPSVDSQQSVTVVIFRDENTLISAGAVDGV
IKVWDLRKNYSVLHQDPVPVQSFLYPGTSARKLGYSSVILDSTGSNLFANCTDDIIYMFN
LTGLKTAPIATFTGHQNSTFYVKASLSPDDQFLVSGSTDNNAYIWKVSDPLHPPTVLQGH
SQEVTSVSWCPSDFSKIATCSDDNTTRIWRLNRKMDVTKTELVGSACQKKHLDKDVIIQS
IHRTPAKASLMEGPNLPSPQQASCAPNVSGDLPRSSNTPSSVSQSSLGKNSTPCQLGKSS
SSSPPSSSSGKKSIREWMVKSPSPPSSLLVAHNTSRTALSPVGQIQSKAVLTTINIPTSE
KRVKRRLDPCDGSVINNNKHDNGSLAAQLSPISKKCKVDFCCEEMQERENLNTEEKGMKN
TGCNFGENLPLASPFPCPDLKASSTSCKSQQRAEILDKENDSPPNLNWLADLAEKQKLEV
GVRVRRLSSSPTASHNLAVRKKEELNPATSPTAASNRKISSYFQRKLTD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgctgttccgtactgtgcagagtagcagggtttgcaactcaaagagggagccc
cacagctaccctttggagactttgctgcaatattaccagtgcaaccgacatgatgagcac
acgtcaagtggtgaccttggggtgccggttcctccttttggctgctcgtggtccacagca
gagcagttacagtgggtccttgcagttgtaaatgaagaaggtgtagtcaggttatacaat
acagaatgccataagaagaaggatccaatttttcgagcatggttggctcacactaatgca
gtgtttgaccttgcttgggttccgggagaaccaaaattagttacagcttcaggagatcaa
actgcaaagctgtgggacgtgagagtgagtgagctcctcggaacgtttaaaggccaccag
tgcagcctcaagtctgtggcctttgggaagcaggaaacagctgtgttttgtaccggtgga
agagatggcaatataatggtctgggatactcgttgcagtaagaaagatggattttacagg
caagtgaagcagatcactggcgctcataactcacaagcaaaacagacacccccaaagcaa
aagaaacggcgacccactgcccggggacttgctccgtctgtggattcgcagcagagtgtg
acggtggtgatttttcgagatgagaacaccttgatctctgcgggggctgtggatggtgtc
atcaaagtgtgggatttaagaaagaactacagtgttctccaccaagatcctgtgccagtt
cagtccttcctttatccaggcaccagtgcacgaaagctaggatactccagtgttattttg
gactcgacaggctccaatctttttgcaaactgcactgatgatatcatttacatgttcaat
ttgactggcttgaaaactgcaccaattgcaaccttcactggtcatcagaatagcaccttt
tatgttaaggccagtcttagcccagatgatcaattccttgtcagtgggtccactgataac
aatgcatatatttggaaggtctctgatcctcttcatcccccaacagtgcttcagggacac
tctcaagaggtgacgtctgtatcctggtgcccttcagatttctcaaagattgccacttgt
tctgatgataatactacgagaatctggcgcctaaatcgaaaaatggatgtgaccaagaca
gaattggtggggtctgcctgccaaaagaagcatttggacaaagacgtcatcattcagtca
atacatcgtactccagctaaagcatcactgatggaaggtcccaatttgccatcgcctcag
caggcttcgtgtgctcctaatgttagtggagacctgcctcgctcttcaaatacccccagc
tccgtaagccagagttccttgggcaagaatagtacgccatgtcagctgggcaagtccagt
tcctcttcaccgccaagttcttcctctgggaaaaagtcaatcagggaatggatggtaaaa
agccccagccctccttcctctctccttgttgcccacaacacgtcaaggacagcgctgagc
ccagttggacaaattcaatcaaaagccgtcttgacaacaataaacattccaacttcagag
aagagggtcaaaaggagattggacccctgtgatgggtcagtaataaacaataacaaacat
gacaatggcagtctcgcagcacaactcagtcctatttctaaaaaatgtaaagttgatttc
tgctgtgaagagatgcaggaaagggaaaacctaaatacagaagagaaggggatgaaaaac
actggttgcaactttggagaaaacctccctttagctagccctttcccctgtccagaccta
aaagcttcctcaacttcatgcaagtcccaacagagagctgagatcctggacaaagaaaac
gactcgcctccaaatctgaactggcttgctgacttagcagaaaaacagaaacttgaagtg
ggtgtcagagtgcggagattatcatcgagtcccactgcctctcacaatctggctgtgagg
aagaaggaagaattgaatccagcaacttcaccaactgcggcttcaaaccgcaagatctct
tcgtattttcagcggaagttgactgattga
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