Leucoraja erinaceus (little skate): 129699771
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Entry
129699771 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04517
IgSF CAM signaling
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129699771
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129699771
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129699771
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129699771
Intermediate filaments
Intermediate filament-binding proteins
129699771
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
LPD22
Motif
Other DBs
NCBI-GeneID:
129699771
NCBI-ProteinID:
XP_055495814
LinkDB
All DBs
Position
8:63282780..63464040
Genome browser
AA seq
2358 aa
AA seq
DB search
MTAIATDYDNIDIQQQYSDVNNRWDVEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVESEDNKEKKSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNAVIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDVSVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDYAIETE
KMIEKYESLASDLLEWIEQTITILNNRKFANSLIGVQQQLQAFNTYRTVEKPSKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKSEHGRELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAV
VAVAKELEAENYHDIKRITARKENVYRLWEYLLELLRARRHRLEMNLNLQKIFQEMLYIM
DWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRIKGVNASARKFASEGEGY
KPCDPQVIHDRVTHLEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEESWIREKEQIL
SAADYGKDLTSVIRLLSKHKAFEDEMSGRRGPLQQTIKEGDAMVAEEHFGSEKIKERIQD
IQDQWAHLDELSAIQKKRLEEAANVHQFKADGDDIDVWMLDILRIVSSNDVGHDEYSTQA
LVKKHKDVGEEVASYRQIIDSLHEQGRSLPDEYYNSPEVEGRLADIEERYKELAELARLR
KQALQDALSQYKMFSEADACELWIDEKEHWLNNMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRIAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSKFRQLVDQKKDALNSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLTAIEAKLDDLQKESER
LAAEHPDQAQAIMSRLAEISDVWEDMKSTLKNREESLGEANKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLAEGEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNHLSQSHSYQLFLRDTKQAEGFLNNQEYVLAHTEMPTTL
EAAEAAIKKQEDFMTTMDANEDKINGVVETGRRLVSDGNIYSDKIQEKVNSIDERHKKTR
EGASELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMSYDEARNLHSKWQKHQAFMA
ELASNKEWLDKIDKDGMQLIAEKPETEVVVKEKLTALHHLWEDLESTTQAKAQRLFDANK
AELFTQSCADLDKWVHNLEGQLQSDDYGKDLTSVSILLKKQQMLENQMEVRKKEVDELKS
QATVLSQEGKDTDEVDSKRTIVENRFTQLLEPLRERKNYLLASKEIHQFNRDLEDEILWA
EERMPLATSTDHGHNLQTVQMLIKKNQTLQKEIQGHKPRIDDIFERSQSMVTADTPSAEA
IQQRLSDLRELWTLLSEETEKRHKRLVESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVMMLKKHQILELAVEDYAETVHQLSKTSRALVADGHPESERISMRQSQVDKLYAG
LKDLAEERRGKLDERYRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDSVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDASRLQSAYAGDKADDIQKRETEVLEAWKTLLDACEGRRAKLFDTGDKFRFFSMVRD
LMLWMEDVIRQIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFARDAGVAEAWLLGQEPYLSS
RELGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRKQEEEERKRQPSP
QPTLPSSDESKSPQQWDGAREGEHKGLPSDQESPRISDTIEGSEMVNGTTEQRTSSKEPS
PTGSPTSDRKTKSSPLQSQSATLPVKSQESPSAQMEGFLHRKHEWEAHNKKASSRSWHHV
YCVINNQEMGFYKDAKNASSGITYHGEVPISLKEALCEIAVDYKKKKHVFKLKLSDGNEY
LFQAKDDEDMNGWIQAITSAVSTDKSETPPSAQSTPAASRAQTLPASVVSTGESSPGRRE
KDKDKDKEKRFSLFGKKK
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaatagcaacggactacgacaacattgacattcagcagcagtacagtgacgtc
aataatcgctgggatgtggaagaatgggataatgaaaacagctctgctcgactctttgaa
agatctcgtatcaaggccttagcagacgaacgtgaagctgttcaaaagaaaactttcaca
aaatgggtgaattcacacttggcacgagtgtcttgcagaatcacagatttgtatacagac
ttgcgcgatggccgaatgctgatcaaactgctcgaagtcctgtcaggagaaagacttcct
aagccaacaaaaggacgaatgagaatccattgtcttgaaaatgttgacaaagcccttcag
ttccttaaggagcaaagagtacatttggaaaacatgggatctcatgatattgtggatgga
aaccatcgactgactcttggtctgatctggactatcattctccgattccagatccaggat
atcagtgttgaatcagaagacaataaggaaaagaaatctgcaaaagatgccctgcttttg
tggtgccagatgaaaaccgcaggctaccccaatgtcaacattcacaactttaccaccagc
tggagggatggcatggcattcaatgctgttatccacaagcacaggccggatctgattgat
ttcgacaaacttaaaaagtctaacgcacactacaatctccagaatgctttcaaccttgca
gagcaacaccttggcctcactaagctgttggaccccgaagatgtcagtgttgaccacccc
gatgagaagtcgatcatcacctacgtggtgacatactaccattacttctccaagatgaag
gccctggctgtggaaggaaaacgtattggcaaggttcttgactatgcgattgagactgaa
aaaatgattgaaaagtacgagtccttggcatctgatctactggagtggattgaacagact
atcaccatcctgaataatcgcaaatttgccaattcactcattggtgttcagcagcagcta
caagcatttaatacatatcgcactgttgaaaaaccctcaaagtttacagaaaagggaaac
ctggaagttttgctttttaccattcaaagcaaaatgagagcaaacaatcagaaagtctac
atgccacgggaaggcaagctcatctcagatatcaacaaggcctgggaaagactggaaaaa
tctgaacacggacgagaactggcattaaggactgagctgatcagacaagaaaagctggaa
caacttgcaaggcgattcgaccgtaaagctgctatgagggagacttggctgagtgaaaac
cagcgtcttgtttcccaggacaattttggttttgatctcccagctgtggaggctgctacc
aagaagcacgaagctatagagacagatattgctgcatatgaagagcgagtgcaagcagtg
gtggctgtggccaaggaacttgaagcagagaactaccatgatatcaaacggatcacagcg
aggaaagaaaacgtctacaggctttgggaatacctactggaattattgcgtgcccgtagg
catcggttagaaatgaacctcaatttacaaaagattttccaggaaatgttatatattatg
gactggatggatgagatgaaggtgctgttgctgtctcaagactatgggaaacatttgctt
ggtgtggaagatctcctgcagaaacatgcactcgttgaagctgacatcgctattcaggct
gacagaatcaaaggtgtcaatgcttctgctcggaaatttgcttctgaaggagaaggttac
aaaccctgtgatccacaggtcattcatgatcgtgtaactcacctggaattctgttaccaa
gaactttgtcagctggctgctgaacgaagagctcgcttggaagagtcccgacgcctctgg
aagttcttttgggagatggccgaggaagaaagctggatccgtgaaaaagaacagattctt
tcagcagctgactacggcaaggatctaacgagtgtgattcgccttctgagcaagcacaag
gcatttgaggatgaaatgagtggacgacgtggacctcttcaacagacgataaaagaaggt
gatgcaatggtagctgaggagcactttggatcagagaagattaaggaacggattcaggac
attcaggatcagtgggcccaccttgatgagctgtctgcaattcagaaaaagcgattggag
gaagctgctaacgttcaccagtttaaggctgatggtgatgatattgatgtgtggatgtta
gatattttgcgaattgtctccagcaatgatgttggccacgatgaatactccactcaagcc
ctagtgaagaaacacaaagatgtgggtgaggaggttgctagctacagacaaatcattgat
tcactacatgaacaaggacgaagcttgcctgatgagtactacaattcaccagaggtggaa
ggtagattggctgatattgaggaacgttacaaggagttagctgaactggcacgacttcgt
aaacaagcccttcaggatgctctgtcgcagtacaagatgttcagtgaagcagacgcttgt
gaactatggatcgatgagaaagagcattggctgaacaacatggagatcccagaaaagctt
gaagatcttgaagtcatccaacacaggtttgaaagtctagagccagagatgaacaaccag
gcttctcgtatcgcagtggtgaaccagatagctcgacagttgatccacagtggtcaccca
agtgaaaaggaaatcaaagcacagcaagataagctaaatacaaggtggagtaaattccgt
caacttgtggaccaaaagaaagatgcactcaattccgcactcagcattcagaactaccac
ctggaatgcaatgaaactaaatcctggattagggaaaagaccaaagtcattgagtccacg
caagatctgggcaatgatcttgctggtgtcatggccctccaaaggaaattaactggaatg
gaacgtgatttaacagcaattgaagctaaactagatgacctgcagaaagaatccgaaaga
cttgctgctgagcatcctgaccaggcacaagctattatgagccgtcttgcagaaatcagt
gatgtctgggaagacatgaaaagtactttaaagaatcgagaagaatcacttggtgaagca
aacaaacttcagcaattcttacgtgatctggatgacttccagtcctggctctcaagaact
caaactgctattgcttctgaagacatgccaaacacgctggctgaaggggaaaagctactc
acccaacatgaaaacatcaaaaatgaaattaacaattatgaggaagactaccagaaaatg
cgagacatgggtgaaatggtaacgcagggacaaacagatgcacaatacatgttcttacgc
cagcgcctgcaagctttggacactggatggaatgaactgcacaagatgtgggagaataga
cagaatcacctgtcccaatctcattcataccaattattcttaagagatacaaagcaagca
gaaggattcctcaacaaccaggaatatgtgttggcacacactgaaatgcccacaacatta
gaagctgcagaagctgccattaagaaacaggaagacttcatgactacaatggatgctaat
gaagataagatcaacggagtggtggagacaggcaggcggctggtcagtgatgggaatatt
tattctgacaaaatccaggaaaaggttaattctattgatgaaaggcataaaaagacccgt
gaaggtgccagtgaacttctaatgcgtttgaaagacaatagagatctacagaaatttctt
caagactgtcaggaactgtccctctggatcagtgagaaaatgctcactgcccaggacatg
tcctatgatgaagccaggaacttgcacagtaaatggcagaagcatcaagcttttatggca
gagcttgcatcaaataaagaatggctcgataaaattgataaggatggaatgcaactgatt
gcagaaaaaccagagaccgaagtggttgtgaaagagaagctcactgctctgcatcatttg
tgggaagatctcgaatctacaacccaggccaaagcccagcgtctgtttgatgccaataaa
gccgaactttttacacagagctgcgctgatttagacaaatgggtgcacaacctggaaggg
cagctccaatctgatgattatggcaaggaccttacgagtgtctctatccttctcaagaaa
caacagatgttggaaaatcaaatggaagtgcgaaagaaagaggtggatgaattgaagtct
caggccacggtattaagccaagaaggtaaagataccgatgaggtggacagcaagcgcacc
atagttgaaaatagattcacgcaattattggaaccactgcgtgaaaggaaaaattacttg
ttggcatcgaaggaaatccatcaattcaacagagatctggaggatgaaattctgtgggct
gaagaacgcatgcctcttgcaacatccactgatcatggccacaacctccagactgtgcag
atgctgattaagaaaaaccagactcttcaaaaagaaattcaaggccataagccccgaatt
gatgatatatttgagagaagccaaagtatggtaactgctgacaccccaagcgctgaagct
attcagcagagattatcagatctacgggaactttggaccttattgtcagaagaaaccgag
aagcggcacaaacgcttggtggagtcacacaaagcccagcagtactattttgatgctgca
gaggctgaagcttggatgagtgaacaagaattgtacatgatgtcagaagagaaagcgaag
gatgagcagagtgcagtgatgatgttgaaaaaacatcagattttggagctggcagtggaa
gattatgctgagactgttcatcaactctcaaagacaagccgagctctagttgctgatggg
catccagagagtgaacggatcagtatgcggcaatctcaggtggataagctttatgctgga
ctgaaagacttggctgaggagagaagagggaaacttgatgagaggtaccgccttttccag
ctgaacagggaggtggatgacctggagcagtggatcgcagaacgtgaagtggtcgctgga
tcacatgagcttggacaggactatgagcatgttacgatgctacaagaaaggttccgtgaa
tttgcacgtgatactggtaatattggtcaagagcgtgttgacagtgtgaaccatatggcg
gatgagctgatcaattctggacactctgatgctgccaccattgctgagtggaaggatgga
ctcaatgaggcctgggcagatctccttgagcttattgacactagaacacaaatcttggca
gcttcctacgaattgcacaaattttaccacgatgctaaggaaattcttggacgaattcaa
gacaagcacaagaagctcccagaggaacttgggcgagatcagaacacggtggaaacattg
cagaggatgcatacaacctttgaacatgacattcaggctcttggaacccaggtgaggcag
ctgcaggaagatgcttcccgcctccaatctgcttatgctggtgacaaggctgacgacatt
cagaaacgtgaaacagaagttttagaagcatggaaaaccctgcttgatgcatgtgaaggt
cggagggcaaagctttttgacactggtgacaagttccgcttcttcagcatggtgcgtgat
ctaatgctttggatggaagatgtcattcggcaaattgaaacccaggaaaaaccaagagat
gtttcatcagtggaattgctaatgaacaaccaccaaggcatcaaggctgaaattgatgct
cgtaatgacagttttacaacatgcattgaacttggcaagtcactcctagcaagaaagcat
tacgcatcagaagagattaaagagaagttgttacagctaacggataagaggaaagaaatg
atagacaaatgggaggacagatgggagtggctcagattagttttggaagtacatcagttt
gccagagatgcaggtgtggcagaagcctggcttcttggccaagagccgtacttgtctagt
cgggaattgggtcagagtgtggatgaggtggagaaactgattaagaggcacgaggcattt
gagaaatcagcagccacgtgggatgaaagattttcagcattggagagactgacaacgctg
gaattgcttgaagtacgcagaaagcaagaagaagaagagaggaagagacaaccatcacca
cagccaaccctgccgtcatctgatgaatccaaatcaccacaacagtgggatggggctcga
gaaggagaacacaagggcttaccgtcagaccaggaatcgccacggatatcggatacaatt
gagggaagtgagatggtaaatggcaccactgaacagagaaccagttccaaagaacccagt
cctacaggatcaccaacttcagatcgtaaaaccaagtcttcacctttgcagtctcaatct
gctactttacctgtcaagtcacaagaaagtccctcagcacagatggaaggcttcctgcat
cgcaaacatgaatgggaagcacacaataagaaagcgtcaagcagatcttggcaccacgta
tattgcgttataaacaaccaggagatgggtttttataaagatgcaaagaatgctagttca
gggatcacatatcatggtgaggttccaataagcctaaaggaagcactgtgtgagatagct
gttgactacaagaagaagaagcatgtttttaaactaaagttgagcgatggcaatgaatat
ctcttccaagccaaagatgatgaggacatgaacggctggattcaagctatcacttctgct
gtgtctactgacaaaagtgagacacctccaagtgcccagagtactccggcagctagtcgt
gcccagaccctgccagcaagtgtggtgtcaactggtgaatctagccctggcagacgtgag
aaagacaaagataaagataaagagaagagattcagtctgtttggcaagaagaagtag
DBGET
integrated database retrieval system
