Leucoraja erinaceus (little skate): 129699786
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Entry
129699786 CDS
T09122
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129699786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129699786
03016 Transfer RNA biogenesis [BR:
leri03016
]
129699786
Enzymes [BR:
leri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
129699786
Messenger RNA biogenesis [BR:
leri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
129699786
Transfer RNA biogenesis [BR:
leri03016
]
Prokaryotic type
tRNA degradation factors
129699786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
129699786
NCBI-ProteinID:
XP_055495848
LinkDB
All DBs
Position
8:complement(64303808..64344196)
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AA seq
795 aa
AA seq
DB search
MAAPCPGGVGSVRRLVARGIWRSSPWRAPALGRPLPASPGTRRNHQQAWASLAERGRVAV
DLGSRKLEISTGKLARFADGCAMVQLGDTSVMVTAVSKTKPTASQFMPLVVDYRQKAAAA
GRIPTTYLRRDLGYTDNEILTSRVIDRSIRPLFPSGYFYDTQIICNLLAVDGINDPDILA
INGASAALALSDIPWNGPIGAVRVGFVDGEVVINPTRKEMALSTLNLVLAGAPQSQVVMM
EAAAENILQQDFCHAVKIGVKHTQQIIQSIQQLASKHGNSKRTPQKSFIPSREIVENARQ
LASEKIREVFKDFTHDKISRDDAINKIRLETEEQLREKFSDVDSFEIMEAFSMVSKEIFR
NIIMNEYVRCDGRDLRSLRNINCEVDLYKPLHGSALFQRGQTQVLCTVTFDSIESSVKSD
LITTLISGVKEKNFMLHYEFPPYATNETGKLVGQNRRELGHGALAEKALKSVVPKEFPFT
IRVTSEVLESNGSSSMASVCGGSMALMDAGVPISAPVAGVAVGLVTKANPESPNSIEDYR
LLTDILGIEDYNGDMDFKMAGTSKGITALQADIKIAGLPLKIVMEAVQQASVAKKEILNI
MNKVIAKPREKRKENGPVVETVQVPLSKRARFIGPGGYNLRKLRAETGVTVSQIDEETFS
VFAPTPNAMHEASELINELCKDDQEQQLEFGAVYTATITEIRDIGVMVKLYSNMTPVLLH
NSQLDLRKIKHPTAIGLEVGQQIQVKYFGRDPTDGRMRLSRKVLQSPVTTVVKNLSDKNS
IVVGARDSASSSASS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctgtcccggcggtgtcgggtcggtgaggcggttggtagctcgtggaatc
tggcgctcgtcgccatggagagcgcccgcgctcggccgcccgttgccagcgagcccgggc
acgcggcgaaatcatcagcaggcttgggccagcctggccgagaggggccgagtggccgtg
gatctgggcagcaggaagcttgaaatttccacagggaagcttgctcggtttgcagatgga
tgtgctatggtgcagttgggagacacatcagtgatggttacagctgtcagtaaaacaaag
cctactgcatcccaatttatgccattagtggttgattatcgtcagaaagctgctgcagcg
ggaagaatacctacaacatatttacgaagagatttgggctacacagataatgagatttta
accagcagagtaattgatcgttcaatcaggccactatttccttcaggctacttttatgat
acacagattatttgcaatctccttgcagtcgatggcatcaatgatcctgacattcttgca
atcaatggagcttctgcagccttggcgttgtctgacattccttggaatggtcccataggt
gctgtaagagttggttttgtcgatggagaagttgtaattaacccaactcgaaaagaaatg
gcattgagcacattgaacttggttctggctggagcacctcagagccaagtagtcatgatg
gaagcagcagcggagaacatattacaacaggatttttgtcatgctgtcaaaattggtgta
aaacatacgcaacaaatcatccagtccattcagcaactggcaagcaagcatggaaattcc
aaaagaacacctcagaagtcattcattccatccagggaaatagttgaaaatgcaagacag
cttgcttcagagaagatccgtgaagtatttaaagattttactcatgataaaatatccaga
gatgatgctattaacaaaatcagacttgaaacagaagaacagttacgagaaaaattttct
gatgttgattcatttgaaattatggaggcttttagtatggtttccaaagagattttcaga
aatattatcatgaatgaatacgtaagatgtgatggcagagatttgagatcccttcggaac
attaattgtgaagttgatctctataagcctcttcatggatctgcactgtttcagagagga
cagacacaggtcttgtgtacagtaacctttgattctattgaatcaagtgtaaaatctgac
cttatcaccactctaataagtggagtgaaagagaaaaatttcatgctgcactatgagttt
ccaccttatgcaactaatgaaactggaaaattagttggtcaaaataggagagaactaggc
catggtgctcttgctgaaaaagcattgaaatctgtggttccaaaggaatttccatttaca
ataagggtaacatcagaagtcctagaatccaatggttcatcttcaatggcatcagtatgt
ggaggaagtatggcattgatggacgcaggtgttccgatatcagctcctgtggctggtgtg
gctgttggccttgtcacaaaggcaaatccagagagtcctaacagcattgaggattaccgt
cttttgactgatattttgggtattgaagattataatggagatatggattttaagatggca
ggtaccagcaaaggcattacagctttgcaggcagacattaaaatagcaggattgccattg
aaaattgtgatggaagctgtccagcaagcttcggttgccaagaaggagatcttgaacata
atgaataaagtgattgcaaaacccagagagaagaggaaagaaaacgggcctgtagtcgaa
actgtgcaggttccattatcaaaaagagccagatttattggtccaggtggttacaatctt
agaaaacttcgggctgaaactggtgttacagtatctcagattgatgaagaaacgttttca
gtatttgcaccaactccaaatgctatgcatgaggcgagtgaattaattaatgaactctgc
aaggatgatcaagaacagcaactagaatttggagcagtttacactgccaccataactgaa
atacgggacattggagttatggtaaagctatattccaatatgactccagtattattacac
aattcacaacttgacctcagaaagataaagcatccaactgcaattggtctggaagttgga
caacagattcaggtgaaatattttggtcgtgacccaacagatggaagaatgagactctcc
cgcaaagtcttacaatctccagttacaacagtggttaaaaacctgagtgacaaaaacagc
attgtagtaggggcaagggattctgcatcatccagcgcctcctcgtaa
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