Leucoraja erinaceus (little skate): 129699850
Help
Entry
129699850 CDS
T09122
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129699850 (scaf8)
03041 Spliceosome [BR:
leri03041
]
129699850 (scaf8)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129699850 (scaf8)
Spliceosome [BR:
leri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129699850 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
DUF3525
DUF3611
TPR_HPS5_insect
Motif
Other DBs
NCBI-GeneID:
129699850
NCBI-ProteinID:
XP_055495960
LinkDB
All DBs
Position
8:72833732..72944047
Genome browser
AA seq
1168 aa
AA seq
DB search
MEAVKAFNNELYSLNEYKPPISRAKMNQVTKSAIKSIKFYKHVVQSVEKFIQRCKPEYKV
PGLYVIDSIVRQSRHQFGPEKDVFAPRFCKNINSTFQNLYKCPADDKSKVVRVLNLWQKN
GVFKSEVIQPLLDLAAGIPPPSVTPAAASTAATVSSNTPGTPATPATPANVQNLPDAWAS
LKLSNSDTILLLHIFFRLYKFFQLQQLVQNLQMQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAATANTLNPLEPRLNFNKKLLDRFEYDEELDRSDETKKETSTTSQLPLVTETMNTSL
FQQLAEQFQQQNFEQLRQQLMEQQTQQNTTLDSQEVTFGSEPSVTPSQGSTQQQQEQEIK
VEDPLEEQQQDMDIDAPDGQDLIEEEIFQQEEKKILVRSRSRTRSRSRSRSPRKKRSRSR
SGSRKRKHRKRSRSRSKERKRKSSRSYSSERRAREREKERQKKGLPPVRSKTLSVCSTTL
WVGQVDKKATQQDITNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSTGSFKM
GSKIIKIAWALNKGVKPEYKQFWDVDLGVTYIPWEKLKLDDLEGFSEGGMIDQETVNNEW
ESRNAEPVKETVPQTVTTDNTPPTSEGETFTQPVTLPPVQPKQQMDDIKFIPQLQEEGPM
PELLLRDLCWSGKTDNRIPVTPTVSAIGMVQPPAFPVSMSIPPPGFNPAIPPPPFLRHSF
NPSHPPPGYLPPPPVVPHPVVGPSIPPVQTSLVCPPLSNTQDSAKDSSFGNLLSQIASGH
SNLPTPNIPPGGLFNPVGAQPLPTGASRSKDLGTSRAGNQTSTADTTSTSGPGTQSAGSS
GSVLGMQPSTPAPGPPSLPPPSMTGSRLTGVLPMDGRPGMMPPSSGQRFPLLMPPQPNMP
PSVAIDGPHQPGSRAPFPPGNTFNRLEGAFTRSGVPNVESGRNVSQGTGDERRSAGNDNT
FQRDNVQQEGDRDYRFPPVDNRDNLGRREQFGFGPDQRWGSRDFDERRGVPFGAPKSFHD
DHERFGGRNFRFDGRTGPMWSRGFDQETHRDFDDRSRPWERQRDRDDRDFGFRRDVNGSR
FGRDREQDHWVPPRHRFDFYQGTTDHEKSDDRPRVNGDFSETDSQPPNKELANNDPEVSV
SLASSSDESEKDDLENQPVTENTDTEGT
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaagcctttaataacgagttgtactccttaaatgagtataaaccacct
atctccagggctaaaatgaaccaggtgaccaagtctgctatcaagtcgattaagttctac
aaacatgtggtacagagtgtggaaaagtttattcaaaggtgtaaaccagaatacaaagtc
ccagggctgtatgttatcgactcaattgtgcgccaatctcgtcatcagtttggtccagaa
aaggatgtgtttgctcccagattttgcaagaacatcaattcaactttccagaacttatac
aaatgtcctgctgatgacaagagcaaagtggtacgggtactgaacctgtggcagaagaat
ggtgtgttcaaaagtgaggtcatacagccacttctggatctggcagcagggattccaccg
ccctctgttacccctgctgctgccagtactgcagcaactgtgagcagcaacacaccagga
actccagctacacctgctactccagcgaatgtgcagaatttacctgatgcatgggcctcc
ctgaagctttctaactctgacacaattctgctgttgcacattttcttcagactatacaag
ttttttcagctccagcagttggtacagaatcttcagatgcagcagcaaaagcctcagcca
tctctacttcaggctcttgatgctgggcttgtcgtccaactccaggccctgacagcacag
ctgacagcagcagcaacagcaaatacactcaacccattggaacctaggctcaattttaat
aagaaactcctagatagatttgaatatgatgaagagcttgatcgctcagatgaaactaag
aaagaaacgtctactacatcccagctacctcttgtgactgagaccatgaacacgtcactt
tttcagcagctggctgaacagttccagcaacaaaactttgagcagcttcggcaacagtta
atggaacagcagacccagcagaatacaacattggatagtcaagaggtaacttttggatct
gaaccgtcagtcaccccttcccaaggcagcactcaacaacaacaagagcaggaaataaaa
gtggaggatccacttgaggaacagcagcaggatatggatattgatgcacctgatggtcag
gaccttattgaagaagaaatatttcagcaggaagaaaagaaaattttagtgcgttcaaga
tcaaggacacgctcaaggtcccgttcaaggtcaccacgaaagaaaaggtccagatctcgg
tcaggctctcgcaaacgtaagcatcggaaacgttcgcggtcacggtcaaaagagagaaaa
agaaagtcctcgcgatcatattccagtgaaagaagagcaagggaacgtgaaaaagaacgt
cagaaaaagggccttccacctgtccggtccaagactcttagcgtatgcagtaccacgcta
tgggttggtcaagtggacaaaaaagcaacacaacaggatataacaaacctttttgaggaa
tttggtcagattgagtcaataaatatgatacctcctcgaggatgtgcgtatgtttgcatg
gttcatcggcaagatgcttttcgtgctcttcaaaaattaagcaccgggtcctttaaaatg
ggatccaaaattattaagattgcatgggctttaaacaaaggtgtgaaacctgaatataaa
caattctgggacgtcgaccttggagtcacatatattccgtgggagaaattgaaattagat
gatttagaaggcttctctgaaggaggcatgattgaccaagaaaccgttaataatgagtgg
gaatctaggaatgctgagccagtaaaggagactgtgccccaaactgttactactgataat
actccgcctacttctgagggagagacattcactcaacccgtcacattgccacctgttcaa
ccgaagcagcaaatggatgatattaagtttattccacaacttcaagaagagggtcccatg
cctgaattattattacgtgacctttgttggtcgggcaaaacggataatcggattccagtg
actccaactgtctcagcgattggaatggtgcagccaccagcctttcctgtgtcaatgtcc
atacctccaccaggcttcaaccctgctattccgccacctccattcttaaggcacagtttt
aatccttcacatcctcctccagggtatctaccaccgcctcccgttgtcccacatccagtt
gttggaccttcaattcctccagtacagacctctctagtttgtccgcctctctcaaacacc
caagacagtgcaaaggattcctcatttggaaacctcctttcgcaaatagcctctggtcac
agcaatctcccaactcctaatattccaccaggaggtttgtttaatccagttggtgcacag
cctctcccaactggtgcaagtagatcaaaggacctgggcacatcacgcgcaggcaaccag
acatcaacagcagatacgacatctacatctggaccaggaactcaaagtgcaggatcgagt
gggtctgtcttgggaatgcagccttcaacgcctgcgccagggccaccaagtttacctcca
ccaagtatgactggatcaagactgaccggagtgctcccgatggatggccgtcctggaatg
atgccaccctcatcagggcaacggtttccattgctgatgccaccacagccaaacatgccc
ccttcagtagcaattgatggacctcatcaaccaggatccagagctccttttccaccagga
aatactttcaataggcttgaaggtgcattcacaagatctggggtccctaatgttgagagc
ggcagaaatgtgagccaaggtacaggagatgaaagacgatctgctggaaacgataacact
tttcaacgagacaatgtgcagcaggaaggtgatcgagattaccgcttcccaccagtagat
aatagagacaatcttggcagacgtgagcagtttggatttgggcctgaccaaagatggggc
tcgagagattttgatgagcgtcgaggtgtgccctttggggcccctaaaagttttcatgat
gatcatgaaagatttggaggaagaaatttcaggtttgatggcagaactggcccgatgtgg
agccgaggttttgaccaggaaactcacagagattttgatgatcgaagcaggccttgggaa
cgtcagagagatcgtgatgaccgtgattttgggtttcgccgagatgtaaatggcagccgt
tttgggagagacagagagcaagatcattgggttcctccacggcataggtttgacttttat
caagggaccactgatcatgaaaaatctgatgataggcctcgtgtaaatggtgatttctca
gaaacagacagccagccgccaaacaaggagcttgcaaacaatgacccagaagtgtctgtg
agtcttgcatcttcatcagatgaaagtgagaaggatgacttagaaaatcaacctgtaaca
gaaaatacagatactgaggggacataa
DBGET
integrated database retrieval system
