Leucoraja erinaceus (little skate): 129699881
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Entry
129699881 CDS
T09122
Symbol
rps27a
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03010
Ribosome
leri04120
Ubiquitin mediated proteolysis
leri04137
Mitophagy - animal
leri04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
129699881 (rps27a)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129699881 (rps27a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129699881 (rps27a)
04137 Mitophagy - animal
129699881 (rps27a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
leri03011
]
129699881 (rps27a)
04121 Ubiquitin system [BR:
leri04121
]
129699881 (rps27a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129699881 (rps27a)
Ribosome [BR:
leri03011
]
Ribosomal proteins
Eukaryotes
Small subunit
129699881 (rps27a)
Archaea
129699881 (rps27a)
Ubiquitin system [BR:
leri04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
129699881 (rps27a)
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129699881 (rps27a)
Exosomal proteins of colorectal cancer cells
129699881 (rps27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
IBR
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
129699881
NCBI-ProteinID:
XP_055495995
LinkDB
All DBs
Position
8:<63874085..63878262
Genome browser
AA seq
151 aa
AA seq
DB search
VYGSKFRFLLQVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
TLHLVLRLRGGAKKRKKKSYTTPKKNQHKRKKVKLAVLKYYKVDEYGKIYRLRRECPSEE
CGAGVFMASHFNRQYCGKCCLTYCFNKAEDA
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
gtatacggtagcaaattccgatttttgttacaggttgaaccctcggataccattgaaaat
gttaaggctaagattcaggacaaggaaggtattccccctgatcagcagcgactgatcttt
gcaggaaaacaattggaagatggccgtacactttctgattataacatccagaaggaatcg
actctacaccttgtattgagacttcgtggtggtgccaagaagaggaagaagaagtcctac
actaccccaaagaagaaccaacataagaggaagaaggttaaactggctgtccttaaatat
tacaaggtggacgagtatgggaaaatctatcgtctacgccgtgaatgtccctcagaggag
tgtggtgctggtgtgttcatggctagtcacttcaacaggcagtattgtggaaagtgttgc
ctgacatactgcttcaacaaggctgaagatgcataa
DBGET
integrated database retrieval system
