Leucoraja erinaceus (little skate): 129700001
Help
Entry
129700001 CDS
T09122
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129700001
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
129700001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_2
EGF_TEN
EGF_Teneurin
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
129700001
NCBI-ProteinID:
XP_055496105
LinkDB
All DBs
Position
9:11293076..11484120
Genome browser
AA seq
1996 aa
AA seq
DB search
MGRSWLEICITMLIVLGLSVPSESQRDFRGRSAQLWGLRTGHRVSNLTVNNVRLPGHTAT
LRGQRNPERNPASSRLPSDAHMPVLYRAASQMTTGKRDARETSTRRAGVNGQIAAGTGRT
AHNPPNYNPVTSRRISPVSVRASRPITSRISALSSRERSRTHLGTAQGDRHTPWWPGRTG
FSSRNSGFISDASSSSSVSLRGANPVSPVRASMLASGASRTRLAAGASQSRSRQFARQNQ
GRRAPSRRLIGPNVCGKQCCSGWSVSQSTNRCMKPVCDPPCQNRGSCSRPQVCVCRSGFR
GSRCEEVVPEQPYNPRGLSSRSLPSRLSASNLNAIQQIDDNAKNNTKRMKQISSRRETSL
IGHTEHLLPQTKYGQLVNTQKLTGTSRMVKHLSNGNGQLLSNSLFNNGQAQVQNRFATNG
QVVAENENALPRGANLTMNVGTIKIVFTPTICKRQCRNGKCHNSCKKGDPTTLYSENGYG
PVSKSGFRIYFCQIPCLNGGYCIGRDKCWCPSNSTGKFCHLPVLHKKQIVTRIAPADSSN
TQSVYTLPLSNQPVVMHPSLVNIHVNHPPEATVQIHQVARVKTPPDSSPKKNIKNSLEQL
SVHSVQQRSQPNNSESHSRQPQVHRRPMTMGRCFQETADGQCEKPLPGLTKQDDCCGSVG
SSWGYHKCTQCPPKLAHQHFLNGQFECPLGYKKVNQTYCQDINECLMTGLCQNANCLNTR
GSYRCTCNPGYMLDTSRSHCISDKAVSAKLGPCFRSLSNGNCSLPLSQQIAKQICCCSRV
GKAWGKNCEKCPLPGSAVFNEICPAGHGYHYSRSHVQILMRPAEEEEISQVILEQHLDNQ
QSTAKDSKLTSKEEHYVNLEGYDTSIKTSKPFVTTHAPSVGNDPVEEVVKTSPAIHVQIV
PEHTGEQVASVLPEEIYDINICEVSPNVCGPGICINRQVGYTCDCDTGYQLDNQQNKCVD
INECREIPQLCSYGQCGNTAGGYRCTCLTGFVLNRQGTDCLDINECETDACGGNGHCINI
LGTYTCSCFTGYTLVISQGKQNCQDINECEQANICNGHRCVNIPGSYVCDCEEGYILTRP
GNCSDSNECLMPGICTNGGCVNMEGSFRCTCNQGFEPVTDQKNCIDIDECLTRDVCFNGL
CTNTEGSYTCSICNPGYSKSENRLACEDIDECESLNACFNGLCVNTEGSYTCSNCNSGYS
VSKTRQTCEDIDECESLDVCFNGLCINTEGSYSCSICNPGYRLSENRLTCEDINECLTQD
ICGPNGECINNEEGSYYCLCAQGYTTTPDRTSCEDVNECSEETKCLGGTCINTDGSYMCR
CETGFTHLPEAEQCTDIDECSLYANASPCGIWKCENTIGSFQCIMACQPGFQRTAIGNCI
DVDECVNETICGTHGYCMNTGGSFHCLCDQGFEVPLRGQACVDVDECVNETICGTHGYCI
NTGGSFHCLCDQGFEVPLRGQACVDINECEMMNGACGTALCENFEGSFFCECMDENEFFD
PAKSQCVPHEAMVIGRVPDMTAVSESSMMPEHTKGDLKECYYNLNDENFCDNLLSRNITK
GGCCCTVGVGWGDNCEVHPCPLANTEAYKGMCPDGKGFIPFQIGSFAFGSQNYGDADECT
MFGSEVCKNGHCVNTRGSYSCYCDAGSYYDNVRLGCTDIDECQDENMCVNGECVNTPGSF
NCFCNPPLILHVTGEKCVNGSESGVDFSEEGDAHLNICWQAVTEAYVCSKPLRTRSTYTE
CCCMYGVAWGLDCAFCPPRTSNDFAQLCNVPRTFGDGSDRSGFEFGHETPSRGEDSQRGI
GSYDNYLRPEYGPYDSQYGAEYGQGDRYFGSRYGQSNPQPDSGFELRDSRLTAQYGPTDS
QRGLEYGSREYSRIPQHRPQEPLSIPLFSSSDNERSSSFEGLQAEECGILNGCENGRCVR
VQEGYTCDCFDGFELDMTKMTCGDINECEDLSDTIPLCRNANCENTEGSYKCICLPGYML
SQNSNDCILEVEAGHQ
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcagttggttggagatttgcatcaccatgctgatagttctggggctctctgta
ccgagcgagtctcagagggattttcgcgggaggtctgcacagttgtggggactcaggacc
ggacacagagtctccaacctgacagtgaataatgtgaggttacctggccacaccgcaaca
ttgagggggcagagaaatccggagagaaatcccgcttcgtcccggctgccatccgatgct
catatgcctgttttataccgggcagcgagccaaatgaccactggcaaacgagatgcccgg
gagactagcactcgccgagccggggtaaacggacagattgcagccgggactggacgcaca
gctcacaacccgccgaattataatcccgttacgtcccggagaatcagtcccgtctcagtc
agggcgagtcgcccgattacatccagaatcagcgctctatcatcgcgggagagaagccga
acacacctcgggaccgcccagggtgatagacatacaccatggtggcctggtcgcaccggc
ttctcctccagaaacagtggttttatttctgatgccagcagcagcagctcagtctcactg
cgaggggcgaaccccgtctcacctgtgcgggccagcatgttggcttcaggtgcttcgaga
acccgactggcggccggcgcttctcagtcgcggagcaggcagtttgccagacagaaccag
gggagacgcgcgccgagcaggagattgatagggcctaatgtttgtggaaaacaatgttgt
tctggatggagtgtgagccaaagtacaaaccgatgtatgaaacctgtatgtgacccacca
tgtcaaaacaggggttcatgttctcgacctcaagtctgtgtctgccgatcaggattccgg
ggttctaggtgtgaagaagttgttccagaacaaccatacaatccccgtggtctctcatca
agatccttgccttctcggttatctgcctcaaatttaaatgccatccagcaaattgatgat
aatgcaaaaaataacaccaaaagaatgaaacaaatttcatctagacgtgagacttcatta
attggtcacaccgagcaccttcttccacaaactaagtatggacagcttgttaatactcag
aaattgacaggaacatcacgtatggtgaaacacttatcaaatggaaatggacagctactg
tccaattcactatttaacaatggacaggcgcaggttcagaaccgatttgctacaaatgga
caagttgtggcagaaaatgaaaatgcactaccacgaggagcaaatctgacaatgaatgta
ggaacaataaaaattgtcttcacaccgactatttgcaaacgccagtgtagaaatggaaaa
tgtcacaacagttgtaagaaaggtgatccaactacactttacagtgaaaatggttatggt
cctgtgtccaaatctggctttcgaatctatttttgccagataccatgtctgaatggaggg
tactgcattggaagggacaagtgttggtgcccgtcaaactcaacaggaaagttctgccat
cttccagtgcttcataaaaaacagattgtgacaaggatagcacctgcagattcttccaac
acacagtctgtttacacactccctctttcaaatcagccagttgttatgcatccatccctg
gttaatatacacgtgaaccacccaccagaggccacagtacaaattcatcaagtggcacga
gtgaagaccccacctgactcttcacctaagaaaaacataaagaattcactggagcaactg
tcagttcattcagtacagcaaagatcacaaccaaataatagtgaaagccacagtaggcag
ccacaggtgcatcgtagacctatgactatgggaagatgtttccaggaaacggctgatggt
cagtgtgaaaaaccacttccaggtctcacaaagcaggatgattgttgcgggagcgtggga
tcatcatggggttaccataaatgcacacaatgtcctccaaaactagctcatcaacatttc
ctaaatggccagtttgaatgtcctctcggctataaaaaggtgaaccagacatattgtcaa
gatattaatgaatgcctgatgacaggactgtgtcaaaatgctaactgcctcaataccaga
ggcagctacagatgtacctgtaatcctggatatatgttggatacgtccaggagccactgc
atctcggataaggccgtttctgcaaagctgggaccctgtttcagatcactgtccaatgga
aactgttctctgcctctctctcagcaaattgcgaaacagatctgttgctgtagccgtgtc
ggcaaagcatggggtaaaaactgtgaaaaatgtccacttcctggctcggctgttttcaat
gaaatctgcccagcgggtcatggttatcattactctaggtctcatgtccagatcttgatg
agacctgctgaagaagaggaaatttctcaagttatcctcgaacagcatcttgacaaccag
cagagcactgccaaagattccaagttaacttcaaaggaagaacattatgtaaacttagaa
ggatacgatacttcaataaaaacttctaagccttttgtcacaactcatgctccaagtgtt
ggcaatgatccagtggaagaagtagtgaagacgagcccagctatacacgtacaaattgtc
cctgaacatactggtgaacaggtggcttcagtgctcccagaagagatttatgatataaat
atatgtgaagtctcaccgaatgtttgtggtccaggaatttgcatcaatcgacaagttgga
tacacatgtgactgtgacacaggttatcagctggataatcagcaaaataagtgtgtagat
attaatgaatgcagggaaatcccacagctctgtagctatggccagtgtggaaatacagcg
ggaggttatcggtgcacttgtttgacaggatttgtattgaaccgacaaggaactgactgt
ctagatataaatgagtgtgaaacagacgcatgtgggggcaatggtcattgcattaatatc
ctgggcacatacacctgctcctgctttacaggctatacgttagtcatttcacaaggcaag
caaaattgccaagatatcaatgaatgtgaacaggccaacatatgcaatggacatcgttgc
gtcaacattccaggttcttatgtgtgtgactgtgaagaaggttatatattgaccagacca
ggaaattgcagtgatagtaatgaatgcttaatgcctggcatttgtaccaatgggggttgc
gtcaacatggaagggtctttcagatgcacttgtaaccaaggttttgaacctgtgacagac
cagaagaactgcattgatatcgatgaatgtttgacccgtgatgtttgttttaatggactt
tgcacaaatactgagggatcctacacgtgctcaatctgcaacccagggtacagtaaatca
gaaaacagactggcttgtgaagacattgatgaatgcgaatcccttaatgcttgttttaat
ggactttgtgtaaacactgagggatcctacacatgctcaaactgtaattctggatacagt
gtatcaaaaaccaggcagacatgtgaagacattgatgaatgtgaatcccttgatgtttgt
tttaatggactttgcataaacactgagggatcctactcgtgctcaatctgcaatcctgga
tatagattatcagaaaaccggctgacatgtgaggatattaatgaatgcttgactcaggac
atttgtggtccgaatggcgaatgtataaacaatgaagaaggctcttattactgcctttgt
gctcagggctataccactactcctgatagaacaagctgtgaagatgtgaatgaatgcagt
gaggagactaagtgtttaggtgggacatgcataaatacagatggatcctatatgtgtaga
tgtgaaacagggttcacacatttacctgaagcagaacagtgtactgatattgatgaatgc
agtttatatgccaacgcaagcccatgtgggatctggaagtgtgagaatactattggctca
tttcagtgcattatggcttgccagccaggattccaacgtacggcaattgggaactgcatt
gacgttgatgaatgtgtaaatgaaaccatctgtggtactcatgggtattgtatgaataca
ggtggttctttccactgtctatgcgatcaaggttttgaggttccattaagaggacaagca
tgcgttgacgttgatgaatgtgtaaatgaaaccatctgtggtactcatgggtattgtata
aatacaggtggttctttccactgtctatgcgatcaaggttttgaggttccattaagaggc
caagcatgcgttgatattaatgaatgtgagatgatgaatggagcctgcggaacagctctt
tgtgaaaatttcgaagggtccttcttctgtgaatgcatggatgagaatgaattttttgat
ccagcgaaaagccaatgtgtccctcatgaagcaatggtaattggccgtgtaccagacatg
actgccgtgtcagaatcatccatgatgccagaacatactaaaggagatttgaaggaatgc
tactacaatctgaatgatgaaaacttctgtgataatttgctgtcacggaacatcaccaaa
gggggatgttgttgcacagttggcgttggttggggcgacaactgtgaagttcacccttgt
cctttggcaaacacagaggcatacaaaggaatgtgtccagatggcaaaggatttattcca
tttcagattggttcatttgcctttggatcgcaaaactacggagatgcagatgagtgtaca
atgtttggctccgaggtctgcaagaatggacattgtgtaaatactagaggaagctattcc
tgctattgcgatgcaggatcttactatgacaatgtgaggttaggatgcactgacatcgat
gagtgtcaggatgaaaatatgtgtgtgaatggagaatgtgtcaacacaccaggatcattt
aactgtttctgcaacccaccacttatattgcatgtgacgggtgaaaaatgtgtaaatggc
tcagaatctggagttgacttctcagaagagggagatgcacacctgaacatatgctggcaa
gcagtgactgaggcgtacgtttgtagcaaacctctgaggaccaggtcaacctacactgaa
tgttgctgcatgtacggagtggcttggggactagattgtgcattctgtccccccagaaca
tcaaatgattttgcacagctttgtaatgttcctaggacatttggagatggatctgataga
tctggctttgaatttggccacgaaacaccgtcccgtggagaagattcacaacgtggaatt
ggatcctatgacaattatcttcggcctgaatatggaccatatgattctcaatatggagca
gaatatggacagggagatcgctattttggatcaagatatggacaaagcaatcctcaaccc
gactcagggtttgaacttagagactcacgtcttactgctcaatatggtccaacagattcc
caacgcggacttgaatatggttcaagagaatattcacgcattccacaacaccgccctcaa
gaacctctgagcatccctttgttcagcagcagtgataatgaacgatccagcagctttgaa
ggtttacaagcagaggagtgtggaattctgaatggttgtgaaaatggccgatgtgtacga
gtgcaggaaggatacacttgtgattgttttgacgggtttgagcttgatatgacaaaaatg
acatgtggagatataaatgaatgtgaggacctcagtgacaccataccactctgcaggaat
gcaaactgtgagaacacagagggatcatataaatgcatctgtttaccaggctatatgctt
tcgcagaattctaatgactgtatactggaagtagaagcaggacatcaataa
DBGET
integrated database retrieval system
