Leucoraja erinaceus (little skate): 129700029
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Entry
129700029 CDS
T09122
Symbol
snw1
Name
(RefSeq) LOW QUALITY PROTEIN: SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03040
Spliceosome
leri04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129700029 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129700029 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129700029 (snw1)
Spliceosome [BR:
leri03041
]
Complex B
Other components
Prp19-related factors
129700029 (snw1)
Complex C
129700029 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
129700029
NCBI-ProteinID:
XP_055496154
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All DBs
Position
9:complement(13485065..13513475)
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AA seq
541 aa
AA seq
DB search
MALTSFLPAPTQLSQDQLEAEEKTRAQRARQTALVASRREPPPYGHRKGWVPRSLEDFGD
GGAFPEVHMAQFPLEMGRKKKASNALAVQVDSEGKIKFDAIARQGQSKDKVVYSKFTDLI
PKEVINEDDPELQRPDEDSIKELTEKTRSALEKQVSQKVAAAMPVRAAEKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKKEEKLRELAQIARERRAGIKTHIEKDENETRERDEIRHERR
KDRQHDRNLARAAPDKRSKVQKDQERDISELIALGVPNQLNSVRVSTELQYDQRLFNQNK
GMDSGFAGGEDELYNVYDQPWRAGKDLAQNVYRPTKNADKDTYDDELETFMKNNRFVPDR
EFSGTDRKQRRDGPVQFERDEEDPFGLDKFLEEAKQHGGSKRPESGRSKEYEHEGKKRRK
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgagttttcttcctgcgccaacgcagctatcgcaggaccagctggaagct
gaagaaaagacccgtgctcagcgggcgaggcaaacagcattggtggcatcacgcagagag
cctccgccctatgggcaccgaaagggatgggttccgcgctccttggaggattttggcgat
ggaggtgcattcccagaggtccacatggcccagtttccactggaaatgggccgcaagaaa
aaagcatccaatgccctggcggttcaggtggactcggagggaaagatcaaatttgatgct
attgctcggcaaggacagtcgaaggacaaggttgtatacagcaagtttacagatctcatt
cccaaagaagttataaatgaagatgatccagagctgcagaggccggatgaagacagtata
aaggagttgactgaaaagacgcgttcagctctggagaaacaagtctcacagaaggttgca
gcagccatgcctgttcgagcagctgagaagctagcccctgcacagtacatcaggtatact
ccttctcaacaaggtgttgctttcaactcgggagctaagcagagagttatcaggatggtg
gaaatgcaaaaggaccccatggaaccaccacgattcaagattaataagaagattccccga
ggtcccccatcacctcctgcacctgtcatgcattcgcctagcagaaagatgacggtaaaa
gaacagcaagagtggaaaattcctccatgcatctcaaattggaagaacgccaagggttac
accattccattggacaagcgcctggctgccgatgggcggggacttcaaacagttcacatc
aatgaaaactttgctaaacttgcagaggctctttatattgcagacagaaaggcccgtgaa
gccgtcgagatgcgagcacaagttgaaaggaaaatggctcaaaaagagaaagaaaagaag
gaagagaaacttcgagaattggctcagattgccagggaaagaagagctggcatcaagact
cacatagaaaaagatgaaaatgaaacaagggaacgggatgaaattagacatgaaagacgg
aaagatcgacaacatgatcgcaatcttgcccgtgcagctccagataagaggtccaaagtg
cagaaggaccaggaacgagatatcagcgagctgattgcattgggtgtaccaaaccaactg
aactcagtacgtgtatcaactgaactgcagtatgaccaaagactcttcaaccagaacaag
ggcatggacagtggctttgcaggaggagaggatgaactttacaatgtttatgaccagcct
tggagggctggcaaagacttggcacaaaatgtatacagacctaccaagaacgctgataaa
gacacttatgacgatgaattggaaacatttatgaaaaataaccggtttgtccccgacaga
gaattttctggtacagaccgtaagcagcgccgtgacggccctgttcagtttgagagggac
gaagaagatccctttgggctggataagttcttggaggaagccaagcaacacggtggctca
aagaggcctgaaagtggtcgttcaaaagaatatgaacatgaaggaaagaagcgaagaaag
gaatag
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