Leucoraja erinaceus (little skate): 129700034
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Entry
129700034 CDS
T09122
Symbol
nrxn3a
Name
(RefSeq) neurexin 3a isoform X1
KO
K07377
neurexin
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129700034 (nrxn3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129700034 (nrxn3a)
Membrane trafficking [BR:
leri04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
129700034 (nrxn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
DUF202
Motif
Other DBs
NCBI-GeneID:
129700034
NCBI-ProteinID:
XP_055496160
LinkDB
All DBs
Position
9:14181239..15542647
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AA seq
1680 aa
AA seq
DB search
MISMDSFCFVLLLSSLAGLCLGIEFTGAPGLWTRYARWDASTRSDLSFQFKTELSSALLL
YFDDGGYCDFVQLMIAEGKVQLKFSIDCFETQLGMDKLVNDDKWHFLMVSRNNLRTVLVL
DGETRSAEVQPQRQYMKIVSDLFIGGVPQDIRKSALTLNTIQDKPPFKGYIEDLKYGDTA
PLLLGSQFVKLVKEGLCTENPCENGGICSLVEAEVSCDCSTTGYVGSYCTEEVNRVPGFS
HLMMGEQAREDNSATFRGSEYFCYDLSQNPIQSSSDEITLSFRTWQRNGLILHTGKSADY
VNLALKDGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTT
GYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDIRLELSRLARI
KDPKMKIHGDVVFKCENVATLDPISFETPEAHISLPKWNTKKMGSISFDFRTSEPNGLIL
FTHGKPQDRKDARSPKKTKVDFFAVELLDGNLFLLLDMGSGAIKIKSTTRKVNDGEWYHV
DIQRDGRSGTISVNSRRTPFTASGDSEILDLEGDMYLGGLPDNRMGSILPTELWTAMLNY
GYVGCIRDLFIDGRSKDIRQLAEAQNAAGVKPSCLRVTSKHCDSNPCKNNAVCREGWNRF
ICDCTVMGFWGRTCEREASILSYDGSMYLKIVMPWVMHTEAEDVSLRFMSQRAYGLLVAT
TSRESADTLRLELDGGRVKLTVNLDCIRINCNSSKGPETLYAGQKLNDNDWHAVRVVRRG
KNLKLMVDEVTAEGQMLGDHTRLEFHNIETGIMTERRFISVAPSSFIGHLQSLMFNGMMY
IDLCKNGDIEYCEINARFGMRSIIADPVTFKTKNSYLTLATLHAYTSMHLFFQFKTTSPD
GFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSEKALSDNQWHNVVITRDNSN
THTLKVDARSVTQIINGAKNLDLKGVLYIAGLAQGMYNNLPKLVASRDGFQGCLASVDLN
GRLPDLIHDALHRSGQIERGCEGPSTTCQEDSCTNDGICIQQWEGYTCDCSMTSYSGSQC
NDPGTTYIFGRGGGLITYTWPANDRPSTRTDRLAVGFSTAVKDAILVRVDSAPGLGDFLQ
LHIEQGKVSVVFNVGTNDIAITESSNVVNDGKYHLVRFTRNGGNATLQVDNWAVKEFYPS
GNIDNERLAIAKTKVPKKFRGIVFDEWLQEKGRMLTIFNTQATITIGGKNRSRPFQGQMS
GLYYNGLKVLNMAAESHPNVRVNGTVRLVGDVSPVIINQPAATALPAEMSTTIMATTTTL
ATTTARKVRGTMKINPVTDDLIVSSAECASDDEDLDECEPSSGGELVFPIVSEEPLATSP
LGTHAPAITSHPTLFTIIGSTKDPLSSATPEIGLPCSDRDNDDCDAGLVISGYASGRPLD
SDAPPLDDEDFHHDLSLVTDKTMLSTSTSEGDFKAHAPKWEYKDTRSNRPPETGGISATE
VSRPGLDTSPVLGKLPAGKLNTREQRPAQPGSALFPLPTGHEADSTKARSPLVTSPMFRH
VPTAAQTTEAGVRGTAAAGVAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDE
GSYQVDETRNYISNSAQTNGNAVKEKSQGGAKVGNSGIGNIGIDNHSGKKHRNKDKEYYV
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcatggattccttctgcttcgtgctgttgctaagttcgctagcgggactctgc
ctgggcatcgaattcacgggagcgccaggactatggacccgctacgccaggtgggacgcc
agcacccggagtgatctcagcttccagtttaagaccgagctctccagcgccctgctgctg
tacttcgacgacggcggctactgcgactttgtgcagctgatgatcgcggaggggaaagtc
cagctcaagttcagcatcgactgcttcgagacccagctcggcatggataagctggtgaat
gacgacaagtggcacttcctcatggtttcacgcaacaacttgagaaccgtcctcgtgttg
gacggcgaaacgcggtcggccgaagtccagcctcagcggcagtacatgaagatagtcagc
gacctgttcatcggaggcgtcccgcaggatatccgcaagtccgcgctaactctgaacacc
atacaagacaaacctcctttcaagggatatattgaagacttgaagtatggggacactgca
ccgttgctcttggggagccagtttgtgaagctggtcaaggaaggcctttgcactgaaaac
ccatgtgaaaatggtgggatttgctctttggtcgaagctgaggtttcctgtgactgttcc
accacgggatatgtggggagctactgcactgaagaagtcaaccgtgtaccaggtttctcg
catctgatgatgggcgagcaagccagagaagacaactccgccactttccgaggatccgag
tacttctgctacgacctgtcccagaaccccatccagagtagcagtgacgagatcaccctg
tctttcaggacctggcagcgcaacggactgatcctacacacagggaagtcagccgactat
gtaaacctagcgctgaaagacggagcggtttccctagtcattaacctgggatctggtgct
tttgaggcgttggttgaaccagtaaatgggaagttcaatgacaacgcctggcacgatgtc
aaagtgacacgcaatctgcgacaggtcaccatttcagtggacggcatcctcaccacgaca
ggttatacccaggaagactacaccatgctgggatctgacgacttcttctacgtcggagga
agtccgagtacggccgacctgcctggctctcccgtcagcaacaacttcatgggatgcctc
agagaggtcgtgtacaaaaacaacgacatccggctcgagctgtcgcgcctggccaggatc
aaggatcccaaaatgaagattcacggcgacgttgtgttcaagtgcgagaacgtggccacg
ctagaccccatatcgttcgagacacccgaggcccacatcagcctgcccaagtggaacacc
aagaagatgggctccatctcctttgacttccgcacgtccgagcccaacggcctgatcctc
ttcacccacgggaagcctcaggacaggaaagacgccaggagcccgaagaaaaccaaagtg
gacttcttcgcggtggagctcctggacggcaacctgttcctgctcctggacatgggatcg
ggagccatcaagatcaagtccaccaccaggaaggtgaacgacggagaatggtatcacgtg
gacattcaacgagacggccgatcaggcaccatatcggtgaacagccgacggactccgttc
acggccagcggggacagtgagatcctcgacctggagggggacatgtacctcggaggtctg
cccgacaacagaatggggtccatcttgcccaccgagctgtggacggccatgctgaactac
ggctacgtgggctgcatccgggacctgttcatcgacggcaggagcaaggacatccggcag
ttggccgaggctcagaatgcggccggggtcaagccctcttgtctacgagtgaccagtaaa
cactgcgacagcaatccctgcaagaacaatgccgtgtgcagagaaggttggaacaggttc
atctgcgactgcacagtcatgggcttctggggaagaacgtgcgaacgggaggcgtccatt
ctcagctacgacggcagcatgtacctgaagatcgtcatgccctgggtgatgcacacggaa
gccgaggacgtctcccttcgcttcatgtcccaacgagcctacggcctgctggtggccacc
acctcgcgggagtccgcagacaccttgcgcctggagctcgacggaggccgggtgaagctg
acagtcaacctagactgtatcaggattaactgtaactccagtaaaggaccagagacgctg
tacgctgggcagaagctcaacgacaatgactggcacgcggtcagagtggtccgacgtggt
aaaaatttgaagctgatggtcgatgaagtcactgcagaaggtcaaatgcttggagaccac
acgcgactggagttccacaacattgagactgggatcatgacggaacgccggttcatctca
gtggccccgtccagtttcatcgggcacctccagagcctgatgttcaacgggatgatgtac
atcgacctgtgcaagaacggggacatcgagtactgtgagatcaacgcccgctttggcatg
aggtccatcatcgctgaccccgtcaccttcaagaccaagaacagctacctgaccctggcc
accctccatgcctacacctccatgcacctcttcttccagttcaaaaccacctccccggac
ggcttcatcctgtttaacagcggcgacggcaacgacttcattgcagtggagttagtcaaa
ggatatatccattatgtgtttgacctgggaaatgggcccaacgttatcaaggggaactca
gagaaggccctaagtgacaatcagtggcacaatgtggtgatcaccagagacaacagcaac
actcacacactgaaggtcgatgccagatctgtgactcaaatcatcaatggtgccaaaaac
cttgaccttaaaggtgtcctgtacatcgcggggcttgcccaaggcatgtacaacaatctg
ccaaagctcgtcgcctccagagatgggtttcagggttgcttggcctccgtggacctgaac
ggaaggctgccggacctgattcacgacgcactgcatcgcagcggtcaaatcgagcgcgga
tgtgaaggtcccagcacaacatgccaagaggactcttgcaccaacgacggcatctgcatc
cagcagtgggaaggttacacgtgcgactgctccatgacctcctacagcggcagtcagtgc
aacgaccctggcacgacctacatcttcggccgcggtggaggcctgatcacctacacgtgg
ccggctaacgacaggcccagcacgcggacggaccgcctggccgttggcttcagcacggcg
gtgaaggatgccatcctggtccgagtggacagcgcccccggtctcggagacttcctgcag
ctacacatcgaacaaggcaaggtcagtgtggtcttcaacgtgggaacgaacgacatcgcc
atcacggagtccagcaacgtggtgaacgacggcaaataccatttggtgcgtttcaccagg
aacggaggcaacgccacgctgcaggtggacaactgggccgtcaaggagttctacccttca
ggaaacattgataatgaacgcctggcgattgctaaaacgaaagtccccaaaaaattcaga
gggatagtatttgatgaatggctacaagagaaaggccgcatgctcacgatcttcaacaca
caggccacgatcaccatcggggggaagaacaggagccgcccgttccaggggcagatgtcc
ggcctgtactacaacggcctgaaggtgctcaacatggccgccgagagccaccccaacgtc
agggtcaacggcacggtgcggctggtcggcgacgtgtcgccggtgatcatcaaccagccg
gcggccaccgccttgcccgcggagatgtccaccaccatcatggccaccaccaccactctg
gccaccaccaccgccaggaaggtccggggaaccatgaagatcaacccggtcaccgatgac
ttgatcgtgtcgtccgcggagtgtgccagcgacgatgaggacctcgacgagtgcgagccg
agctcaggaggtgaactagttttccctatagtgtcagaagaacctttagccacctcaccc
cttggcacccatgcccccgccattacctcccaccctaccctcttcaccattattggaagc
accaaagaccccctgtcctccgcgacccctgagattgggttgccttgctcggaccgggac
aacgatgattgtgatgctggcctggtgatatcgggttatgcgtcggggcgacctctagac
tccgacgcgccccctcttgatgatgaagattttcaccacgacttgtccttggtaacagat
aagaccatgttgtccacgtcgacctcggaaggtgacttcaaagcgcacgcacccaagtgg
gagtacaaggacacgagatcaaatagaccgcccgagaccggcgggatctcggccactgaa
gtctctcgccccggcctcgacacctctccggtcttgggcaagttgccagcgggcaagttg
aacacacgggagcagaggccggcccagccgggctcagcgctcttcccgttgcccaccggt
cacgaagcagacagcaccaaggcgaggagtccgctagtcacctcacccatgttccgtcat
gtgcccacagcagcccagaccaccgaggcgggagtgcgtgggacagcggcggcgggagtg
gccgaggtggtgcgggagtcgagtagcaccaccggcatggtggtgggcatcgtggcggca
gcagccctctgcatcctcatcctgctctacgccatgtacaagtaccgcaaccgggacgag
ggctcctaccaggtggacgagacgaggaactacattagcaacagcgcgcagaccaacggc
aacgcggtcaaggagaaaagccaaggtggtgccaaagttggcaacagcggcattggcaac
attggcatcgacaaccacagcggcaagaaacacaggaacaaagacaaagagtactatgtg
tag
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integrated database retrieval system
