Leucoraja erinacea (little skate): 129700044
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Entry
129700044 CDS
T09122
Symbol
gtf2a1
Name
(RefSeq) transcription initiation factor IIA subunit 1
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129700044 (gtf2a1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129700044 (gtf2a1)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
129700044 (gtf2a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
DDHD
CCD97-like_C
SRP-alpha_N
PPP4R2
Pox_Ag35
Dehydrin
Motif
Other DBs
NCBI-GeneID:
129700044
NCBI-ProteinID:
XP_055496190
LinkDB
All DBs
Position
9:complement(16121308..16171678)
Genome browser
AA seq
412 aa
AA seq
DB search
MASSANSNPVPKLYRSVIEDVINDVREQFLDEGVDEQVLIELKTLWENKLMQSKAVDGFH
SEEQQILIQAQQQQQQQQQQQQQQHHHQQQQQQQQHQHQAQQHQQTSQVRTIPANSVFSS
SHKSGPQVIMQDGKLIQHLNPTGMSAAATAATLALPAGVPAPYQLSNGPILTNTGQLLQF
VRTPNGAHYFIQPHQQVVLAQSVTQQQVIQQMQSGSVQAPVIQQVCTPVPPGTIPQQTGV
IIQPQQILVAGSKVPSNAQVMQATTVTATPSTQVGQTNSAAPVQQQQQQQQQQQQQQQQQ
QPPLVMQVDGSGDTSSEEDEDDEEDEYDDEEEEKDKEEVGEDGQVEEEPLNSEDDVSDEE
GQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYVFSKAIGDAEW
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttcggccaactcaaacccggtgcctaaactctacagatcagtgattgaagac
gtgattaatgatgtgcgggaacagttccttgatgaaggagtggatgagcaagtccttata
gaattaaaaacgctatgggagaacaaactaatgcagtcaaaggctgtagatggcttccac
tccgaggagcagcagattttaattcaagctcaacagcagcagcaacagcaacagcagcag
caacagcagcaacaccaccaccagcagcagcagcaacaacagcagcatcaacatcaggcc
cagcagcatcaacagacatcgcaagtgcgcaccatccctgctaattcagttttctcatct
tcccataaatcaggaccgcaagttattatgcaagatggaaaactaatacagcatttgaat
ccaactggcatgagcgcagctgccaccgcggcgactctggcattaccagctggcgtccca
gcgccctaccagctttctaatggaccaatactaacaaacacagggcaactgctgcagttt
gtacgaaccccgaatggggcccactacttcattcagccccaccagcaagttgtactggca
cagtcggtcactcagcaacaggtcattcagcagatgcagtccggcagtgtgcaagcacct
gttatacagcaggtgtgtacacctgtcccgccgggaaccatccctcagcagactggagtg
atcattcagccccagcagattctagttgctgggagtaaagttccttcgaatgcacaggtg
atgcaagccaccacggttacagcaactccttccacacaggtgggtcagaccaacagcgct
gccccagttcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagccacctttagtcatgcaagtagacgggtctggggacacctcttctgaggaagacgag
gatgatgaagaggacgagtacgatgacgaggaagaagagaaagacaaggaggaggtcgga
gaggatggacaagttgaagaggagccactgaacagtgaagatgatgtcagtgatgaagag
ggccaagaactctttgacacggaaaatgttgttgtgtgccaatatgataagatccaccgg
agtaagaataagtggaagtttcacctgaaggacgggatcatgaaccttaacgggagagat
tatgttttttccaaagctatcggagatgcagagtggtaa
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