Leucoraja erinaceus (little skate): 129700112
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Entry
129700112 CDS
T09122
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04137
Mitophagy - animal
leri04140
Autophagy - animal
leri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129700112 (hif1aa)
04137 Mitophagy - animal
129700112 (hif1aa)
04148 Efferocytosis
129700112 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129700112 (hif1aa)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129700112 (hif1aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
TPR_TTI1_2nd
Motif
Other DBs
NCBI-GeneID:
129700112
NCBI-ProteinID:
XP_055496286
LinkDB
All DBs
Position
9:complement(21953968..21991209)
Genome browser
AA seq
829 aa
AA seq
DB search
MREIEEGSGEDNNKMQVDGEKKGGSSETRKEKSRDAARCRRSKESEVFFELAHELPLPHS
VSSHLDKASIMRLTISYLHLRKLFNDRDAELEADLEKQLNSFYLKALDGFVLVLTQDGDM
IYMSENVNKCMGLTQFELIGHSIFDFIHPCDHEEMREMLSHRQGLLKKGKDQNTERNFFL
RMKCTLTSRGRTVNIKSATWKVLHCTGHIQVYKSKSEQMHCGYKEPPMTCLVLICEPIPH
PSNIEVPLDSKTFLSRHGLDMKFSYCDERITELMGYQPEELLGRSIYEYYHAMDSDHLTK
THHDLFTKGQATTGQYRMLGKEGGYVWVETQATVIYNSKNSQPQCIVCVNYVLSGLVEKE
VVLSLDQTERVPAFTEKAEEPVKATTDQSTNEEATNLFDKLKEEPEALTQLAPAAGDTVV
SLDFSPSGSEIQQFDEVSLYNDVMLPSATDRKTVDLALSPLPPSDAVKPLCNSTESALES
IIKLETTQEPLEFSFTIPQINEQTSKSSCLGPTHNSTQPSSPPAYCFNVDTEMSNEFKLD
MVEKLFAIDPEAKTPFSVQDIDNLDLEMLAPYIPMDDDFQLRSLDQLSPLTESPATPPST
QSMNNVIDIFPQAGSSVKDTPHKNTQTLNQVEKIEPVNAIKSCIHVNEMDNCPEALYCES
SSRTASPVRTGGKGPLTQQIDTSHPQSLVSPVKVLLNYSKRSAKERAPTEDPSPQTVVLH
NSPKKRKLENAASLFQAVGIELLFPSDTNPSVSIPHTWKRAKGFEANGSEQKTLVLLPTD
IVARLLAHSAEDNSLPTLTNYDCEVNAPIQGNRTLLQGEDVLRALDHVN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagatcgaggaaggaagcggcgaggacaataacaagatgcaagtcgacggcgag
aagaagggaggtagctcagagacacgaaaggaaaagtctcgtgatgctgccaggtgccga
agaagcaaagaatcagaggtcttctttgagttggcccatgaattgccacttccacacagt
gtctcctctcatctcgataaagcctctatcatgaggctgactatcagctacctacacttg
aggaaactgttcaatgatcgggatgctgagctggaagctgacttagagaaacaacttaac
agcttttacttaaaagctctggatggatttgtcctggtgttaacacaggatggagacatg
atctacatgtctgagaatgtcaacaagtgcatgggacttactcagtttgaactgattggg
cacagtatttttgacttcattcacccatgtgatcatgaagagatgcgggaaatgctttca
cacaggcaaggacttctgaagaagggaaaggatcagaacaccgaacgcaacttctttttg
cggatgaaatgtactttgacgagtcgaggccgtactgtcaatattaaatcagcaacatgg
aaggtccttcattgcactgggcacattcaagtgtacaaatccaaaagtgagcagatgcac
tgtggttacaaggagccacctatgacctgtcttgttttgatctgtgaacctattccacac
ccatccaacatagaggtcccactggacagcaagacatttttgagtcgtcatggcctggac
atgaaattctcctattgtgatgagagaataacagagttaatgggctaccaaccagaagaa
ttgctgggtcgttcaatctatgaatattaccacgccatggattcagaccatctgaccaaa
acccatcatgatctatttacaaaaggccaagcaaccacaggtcagtacaggatgttagga
aaggaaggtggttacgtttgggtggaaactcaggccacggtaatctacaattcaaaaaat
tcccaacctcagtgcatcgtctgcgtgaactacgttttgagtggtttagttgaaaaagaa
gtggttctttcactggatcagactgaacgtgtaccagcattcacggagaaggctgaggaa
cctgttaaggcaacaaccgatcaatccacaaacgaagaggccaccaatctgtttgacaaa
ctgaaggaggaaccagaagctttgactcaacttgcaccagctgcaggcgatacagttgtc
tcactggactttagcccttcaggttcagaaatacagcagtttgatgaggtctctctgtac
aatgatgttatgttgccctccgccactgaccgaaagacggtagacttggcactgtcaccc
cttcctccttcggatgcagttaagccactatgcaacagcacagagtcggccttggagtca
attatcaagcttgaaacaacccaagaaccactggaattttcatttaccattccacaaatt
aatgagcaaacaagcaaatcctcctgtcttggccccactcacaattcaacacaacccagt
agtcctccagcctattgctttaatgttgacactgaaatgtctaatgagttcaaattggac
atggtggaaaagctttttgcaattgatccggaagccaaaacccccttctctgttcaggac
attgataacttggatttggagatgctggctccatacataccaatggatgatgactttcag
cttcggtcattggaccaactttcaccacttacggaatctccagccacccctcccagcaca
caaagcatgaacaatgtgattgacatcttcccacaagctggatcatctgttaaagacact
ccacacaagaatacgcaaacattgaaccaagtggaaaagattgagcctgtgaatgcaatt
aaatcttgcatacatgtaaatgaaatggataattgcccagaagcactctattgtgagagc
agcagcagaacagcttcacctgtccgaactggagggaaaggaccactgacacagcagatt
gatacttcacatccgcagagtcttgtatctcctgtgaaggtgttgcttaattacagtaaa
agatctgcaaaagaaagagctccaacagaagacccgagccctcagacagtggttttgcac
aattcacctaagaaacgaaagttggaaaatgcagcttccctgttccaagcagttggaatt
gaattattgttcccaagtgacacgaacccttcagtcagtataccacacacgtggaagcgt
gcaaaaggatttgaagctaatggcagtgaacagaagacacttgtgttgttacccactgat
atagtagccaggcttctggctcattcagcagaggacaatagcttgccaacactcaccaac
tatgactgtgaagtgaatgcacctattcaaggcaacagaaccctgcttcagggtgaagat
gttcttagagcattggatcatgtcaattaa
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