Leucoraja erinaceus (little skate): 129700224
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Entry
129700224 CDS
T09122
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
leri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129700224 (pnn)
03015 mRNA surveillance pathway
129700224 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129700224 (pnn)
03041 Spliceosome [BR:
leri03041
]
129700224 (pnn)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129700224 (pnn)
Spliceosome [BR:
leri03041
]
Complex C
Other components
EJC/TREX
129700224 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
129700224
NCBI-ProteinID:
XP_055496489
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All DBs
Position
9:35460649..35479174
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AA seq
632 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKNVDENIRKLTGRDPNDLRPGQARRLSITGPGGGRGRGIGL
LRRGLSDSGVGPPAKQRDLDGAINRLGDRRSRRESRQDSDAEDDEDTKKPALQSSVVATS
KERTRRDLIQDQTMDEKGKERNRRMFGLLMGTLQKFKQESNVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQSELRLLEQKVELAQLQDVWNEHNLKIIKYIRTKTKPH
LFYIPGKHCPATQKLLDDSQRKMNGIFEHRRLEFADQINRMEVRPRRQSFKEKEQREMQK
EEQPNEEQEGKVAHREEMEELGNQNNDVEMEAAEEKVEVVTDKSDAGQQQNKQQEEEAEE
EVEEGESNSQPESVPVDGKEASQSVENDQDMVEEVEECMEERVEEVCREPEPEPEPEPEP
KPEPEPEPELLPELEPKPGSEPGPESELESSAGHELEQESLATAHPVESQVEPVRVSPKR
SRSKSRGHEKTKSKSRSRSSSSSSSGSSSSSTSSGSSSSSSSSRSSSSSSSSSSGSSSRD
SSSSSSSSESRSRSRGHSRDRKRRRSSDQKRRGISSADKDRKSSKTSSKDLKGSREKGSR
LDSKRSISENRSGKRSSRTDRDHKLDRKDKKH
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgagaagtttgcaagatcagctagagaaagccaaggaaagtttgaag
aacgtggatgaaaacatccgcaagctaacaggcagggacccgaatgacctcaggcccggc
caagctagacgtttatccatcacaggacctggtggaggtagggggcgtgggattggattg
cttagacgtggactctcggatagcggagtgggacccccagctaaacagagggatttggat
ggggcaatcaacaggctgggagatcgtcgttcaagaagagagtcacgtcaagacagtgac
gcagaggacgatgaagatacaaaaaagccagcgttgcagtcttcagttgttgctacctcc
aaagaaaggacacgccgagaccttattcaggatcaaacaatggacgagaagggcaaagaa
aggaatcggcggatgtttggcctgctgatgggtactctacaaaagttcaagcaggaatct
aatgttgcaactgagaggcaaaaaagacggcaggaaatagaacagaagcttgaagtgcaa
gctgaagaagaacgtaaacaggtagaaaatgaaaggagagaattatttgaggaacgtcgt
gctaaacaatctgaactaagacttcttgaacaaaaagtggaactagcccagttgcaagat
gtttggaatgaacataatttaaaaataatcaaatacataagaaccaagacaaagccgcat
ctgttctatattcctggcaaacattgcccggctactcaaaagcttttggatgattcccag
aggaagatgaatggcattttcgagcacaggcgtctggagtttgcagatcagattaacaga
atggaggttagacctagacgtcaatcattcaaggaaaaagaacagcgagaaatgcagaag
gaagaacaaccaaacgaggaacaggagggtaaggtggctcaccgtgaggagatggaggaa
ttaggtaaccagaacaatgatgtagaaatggaggcagcagaagagaaagtggaagtagtt
acggataagagtgatgcagggcagcagcaaaataagcaacaggaagaggaagctgaggaa
gaggtagaggaaggggaaagcaacagtcagccagagagtgtgccagttgacggtaaggaa
gctagccagagcgtggagaatgatcaggatatggtggaggaagtagaagagtgcatggag
gagagagtagaagaggtttgtagggagccggaaccggagccagaacctgagcctgagcct
aagccagagccagagccagagcctgagctgttacctgaacttgagcccaaaccaggatct
gagccagggcctgaatccgaacttgaaagttcggctgggcatgagctggaacaagaaagt
cttgccactgctcacccggtggagtcgcaagtagaaccagtcagggtgtcgccgaagaga
agcaggagcaaaagcagaggtcatgagaaaaccaagagtaaaagtaggagtcgtagcagc
agcagttccagctcgggcagtagttccagcagcaccagcagtggcagcagctcaagcagt
agcagcagtaggagcagctccagcagcagcagcagcagcagtggcagcagtagcagagac
agcagcagcagcagcagcagtagcgagagcaggagtcggagccggggtcacagcagagat
agaaagcgcaggaggagctcggatcaaaagcgtaggggtatttccagtgcagacaaggac
cgtaagtcatcaaagactagtagcaaagatctaaaaggttcaagggaaaagggatcaagg
ttagatagcaagaggtctatatcagaaaatcgttcaggcaaaaggtcttcacggactgac
agagatcacaaattggacaggaaagacaaaaagcactaa
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