Leucoraja erinaceus (little skate): 129700363
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Entry
129700363 CDS
T09122
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129700363
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129700363
Intermediate filaments
Intermediate filament-binding proteins
129700363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
IFT81_CH
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
129700363
NCBI-ProteinID:
XP_055496760
LinkDB
All DBs
Position
9:50368178..50568150
Genome browser
AA seq
2370 aa
AA seq
DB search
MTSATDFDNVEIQQQYKHVNDRWELSDEGELDNDNSSARLFERSRIKALADEREVVQKKT
FTKWVNSHLARVTCRITDLYTDLRDGRMLIKLLEVLSGEQLPKPTKGRMRIHCLENVDKA
LQFLKEQKVHLENMGSHDIVDGSHMLTLGLIWTIILRFQIQDITVETDDYHETRSAKDAL
LLWCQMKTAGYPNVNIRNFTSSWKDGLAFNALIHKHRPDLIQFDKLKKSNAMHNLQHAFD
VSEKNLNVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRIGKVLDNAIE
TQNMIDKYEELASDLLTWIEQTIIVLNSRKFANSLSGVQQQLQAFNTYRTVEKPSKFQEK
GNLEVLLFSIQSRMRANNQKVFTPHEGKLISDINRGWEGLEKAEHERELALRNELIRQEK
LEQLARRFDRKAFMRETWLFENQRLVSQDNFGYDLPAVEAAMKKHEAIETDIAAYEERVQ
TLMDVSQELEAENYHDITRINARKENILRLWEYLLELLNARRARLEMNLALQKIFQEMLH
IIDWMDEMKIRLLSQDCGKHLMGVEDLLQKHALQEADIVVQADRMKIINAGALKFTEGEG
YTPCDPNVIKDRVDHLELCYEELCALAAERKARLEQSRHLWTFFWEMDETESWIREREQI
FSSQDYGKDITSIMILQSKHKTLEDELGSLRNHLQQTIKLGNDMVAENHFAAPEIKKRIE
EVFSMWRDLEELTAFRKQNLLHSQSFFQFQVDADDLKTWLEDTYRLMSSDDVGHDEFSTQ
TLMKKQRDQIDEIMKSGTAIDGLNKQFQSLPEEFRKLPDIMNRRREVKEQYADLVALSDL
RKQHLQDALALYVMFSEADACDLWMNEKEKWLEGVEIPKKMEDLEVVQHRFETLEQEMNN
LGSQINDVNHAANHLIESGHPSTQEVKACQDHVNQRWMIFQKLVEIKKNNMNSALSLQNY
YLECDETKVWICEKTKLIESTQDLGNDLAGVMTIQRKLCGIERDLAAIESRLPELQNVAH
TLADDYPKHASDILNRLKETNDAWDELKYTLQGREESLGEASKLQKFLQDLDDFQLWLSK
TQKTIASEDEPNSLPEAEMLLRQHNAIKNEVDRYEEDYQKIRDGGHVITQGETDPQFQIL
EHRLEGLNTGWNELHQMWENRKDLLSQSHGYQQFLRDSKQADSILRNQEYSLMHVEMPKT
LEAADGAMKKQEGIMTSMDANEDKIIGTIDEGEKLIADGNIFKDKMRDKIKSIEERYKEN
RKKATEVTEHLKDNRDLQHFQQNCQELTFWINEKMLTAQDTSYDEARNLHTKWQKHQAFM
AELASNKEWLDKIDWEGKQLMDEKPEFKPVVSEKLDELHHRWEILDSTTKDKAHRLFQAN
RSELFSQGCEDLNKWMDELESQLHAENFGKDLTSVNILLKKLQMVENQVEVREKEVEELV
GQARILSEEGQLVTDEKENDIEKRFLQLMAPLQKRRQNLLMSKMSYQFYRDLEDESLWVK
ERMPLATNTDHGHNLQAVQLLMKKNKTFQKEIQGHQPRIDDVLERGEKMIVDQRPDAGTI
KEQLKELNGLWAKLQEETEERQKRLESANEAQQYYLDAAEAEVWMSEQELYMISDDKPKD
EDSATSMLKKHQILQQAILDYGNMIQELANRAQILLAAEHPEGEQIIRRQGQVDKQYAGL
RDLGNERQKKLDDMHNLFQLNREVIDLEQWIAERDLAASSQELGQDFDQVTMLREKFREF
ARDTGTIGQERVDSVNMLIDDLIDSGHSEAADIAAWKDSLNEAWADLLELIDTRTQLLAA
SYELHKYFYDGKELLSLIQEKHEELPEELGRDANTAESFHRMHNTFERDIHSLGVKVQQF
QDDAGRLQTAYAGDKAAAIQKREQEVVEAWKALLDACDCRRTQLIDTAEKFRFFSMVRDL
MSWMESIVRQIETEEKPRDVSSVELLMKYHQGIRAEVDARNRNFVSCIDLGKMMLARKHR
ASDEIKEKLIQLTENRKLMMDKWDERWYWLRLLLEVCQFARDASVAEAWLISQESYLSSR
DLGNNVGETEKLIKRHEAFEKSTATWDERFEALERLTTLELLEIQKQQEAFKRSKEAQVV
PEEQVDHEQRTPVPTREEKEQKEGWKVEDQEATEITPHVTEEPSLITTSEDLSTMVNGTD
SPEDKALESEEKSLFEEKPNERVSKLPPLILPAVEIEKPRTSSTLPSFTSMEDIVQVGGY
LGRKHELEGHNKKASNRSWITLYCALKNGEFCFYKDMKNCSAGVTYHGDDPLNLKNAICE
VAADYKKKKHVFKLRLNNGNEYLFHCKDEEELHNWIHNLNIAIAEHGKPQNAKQEDARSH
TLPLPSVIVQETSPGKKDKEKRFNIFAKKK
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggccacagattttgataatgttgagatacagcagcagtacaaacacgtcaat
gatcggtgggaactctctgatgaaggtgaactcgataatgacaacagctctgcaagattg
tttgagcgttccaggatcaaagctcttgcggatgaacgcgaagttgtgcagaagaaaacc
ttcaccaaatgggtgaactcacatttggcacgtgtaacgtgccgtattactgatctgtac
accgatttgcgagatggccgaatgctgattaagttgctggaggttctttcaggggagcaa
ctgccaaagccaacaaaaggtcggatgcgtatacattgtttggaaaatgtggacaaggct
ctccagttcctcaaagaacaaaaggtgcacctggaaaatatggggtctcatgatatcgtt
gatgggagccacatgcttacactcggtctcatttggaccatcattctccgtttccagatt
caggatatcaccgtggagacagatgattaccatgagactcggtcagcaaaggacgcactt
ctcctctggtgtcagatgaaaacagcaggatatcctaatgtaaacatccgaaacttcact
tcaagctggaaggatgggctggcatttaatgcccttattcacaaacacaggcctgatctg
attcagttcgacaagctgaaaaagtccaacgccatgcacaacttgcagcatgcctttgat
gtatctgagaaaaatctgaatgtgaccaaactgctggatcctgaggatgtgtttacagag
aatccagatgagaagtcaatcattacctatgtggtagcattttaccattacttctccaag
atgaaggcattagcagtggaggggaaaaggattggcaaggtgttggacaatgcaattgaa
acccaaaacatgatcgataaatacgaagaactggcatccgacttgctaacttggatcgag
caaaccatcattgtcctcaacagtcggaagtttgccaactcgttgagtggagtgcaacaa
caactacaggccttcaatacttatcgcacagtggagaaaccttctaagtttcaggaaaag
ggtaaccttgaggtgctgctgttctccatccagagcaggatgagggcaaacaaccagaaa
gtgtttacgccgcatgaaggaaaacttatctcagacattaacaggggctgggaagggctg
gagaaggcagagcatgaacgtgagctggctctcaggaatgaactcatcaggcaggagaaa
ctggagcagctggcccgccgtttcgaccgcaaggcctttatgagggagacctggttgttt
gagaatcagcggctcgtctcgcaggataactttggctatgacctgcctgctgtggaagca
gcaatgaagaagcatgaagcaattgaaactgacattgcagcctatgaagaacgtgtgcag
actcttatggatgtgtcacaggaactggaggccgagaattaccacgacattacacgtatt
aatgccaggaaagaaaacatcctgcgactatgggaatatcttctggagttgctcaatgcc
cggcgagcaaggctggaaatgaacctggcccttcagaagatttttcaggagatgcttcac
atcattgattggatggatgaaatgaaaatacgactcttatcacaggattgtggtaagcat
ttgatgggtgtggaggaccttctgcagaaacatgccttgcaggaagctgacattgtggtt
caggctgacaggatgaaaataatcaatgcaggagcactcaagttcactgaaggagaaggt
tacacaccctgtgatcccaatgttatcaaagaccgtgtcgatcatctggaactgtgttat
gaggagctctgtgcgttggcagcggaaaggaaggcacgccttgagcagtcacgtcatctt
tggacgttcttctgggagatggacgaaacggagagctggattcgagaaagagagcagatc
ttctcatcgcaggattacgggaaagacattaccagcattatgattctgcagagcaagcac
aagaccctggaggatgaattaggtagtctcaggaatcatctgcaacagactattaaacta
ggcaatgacatggttgcagagaaccactttgctgcaccagagatcaagaaaagaatagag
gaggtcttctccatgtggagggatttggaggaattgactgctttccgcaagcaaaatctt
ctgcattcacaaagcttcttccaattccaagtggatgcagatgatctcaaaacttggtta
gaggacacttatcgtcttatgtcttcagacgatgtcggccacgatgaattttcaacacag
acactgatgaagaaacagagagatcagatagatgaaatcatgaagtctgggacagctatt
gatggtctaaataagcagtttcagagtctcccggaagaatttagaaaattgccagatata
atgaaccggcggagggaggtaaaggagcaatatgcagatctcgtggctctatctgatcta
cggaagcaacatctccaggatgctctcgctctctatgtgatgtttagtgaagctgatgcg
tgtgacttgtggatgaatgagaaggaaaaatggctggagggggtagagattccaaagaaa
atggaggatttggaagtggtacagcacagatttgaaaccttggaacaggaaatgaacaac
ctggggtctcagatcaatgacgtaaaccacgcagcaaaccacctgatagagagtggccat
cctagcacacaggaggttaaagcatgtcaggatcatgtgaaccaaagatggatgatattc
cagaagttagtggagataaagaagaacaatatgaactctgcgttaagtcttcagaattat
tatctcgagtgtgatgagacgaaagtctggatctgtgagaaaaccaaactcattgaatca
actcaagacctgggaaatgacttagctggtgtaatgaccattcagaggaagctgtgtggg
attgagagagacctggctgccattgaatccaggctcccagagttgcagaatgtagcccat
acattagcagatgattatcctaagcatgcctcagatatcctgaataggctcaaggaaacc
aatgatgcttgggatgagttgaaatacactcttcagggtcgtgaagaatcacttggtgaa
gccagcaaactgcagaaattcctgcaagatttggatgactttcagctgtggctatccaaa
actcaaaaaaccatcgcttctgaagatgaaccaaactccttacctgaagcagaaatgctc
ctccgccaacacaacgccataaaaaacgaggtagatcgttatgaggaagattatcagaag
atcagagatggcggacacgtgataacacagggagaaacagacccacagtttcaaatacta
gagcaccgattggaaggattgaacactggttggaatgaacttcatcagatgtgggaaaac
agaaaggatcttctctctcagtcccatggatatcagcagttccttagggacagcaaacaa
gcagatagcattctcagaaaccaggaatacagcttgatgcatgttgaaatgccaaaaacc
ttggaggcagctgatggtgcaatgaaaaagcaagagggtattatgacaagcatggatgcc
aatgaagacaaaatcattgggacaatcgatgaaggagaaaagctcatcgcagatggaaat
atttttaaagacaagatgcgtgacaagataaaatctattgaagaaaggtacaaagaaaat
aggaaaaaggcaacagaagtaactgaacatttaaaagacaaccgtgatcttcaacacttc
caacagaattgccaagagcttactttttggatcaacgagaagatgctaacagcccaggac
acttcttacgatgaagctcgcaatcttcacacaaaatggcagaagcatcaagcatttatg
gctgaattggcatcaaacaaggagtggctggacaaaatcgactgggaaggaaagcaactg
atggatgaaaagccagaatttaaaccagttgtctcagagaaactagatgaactacatcat
cggtgggaaatcctggactcgaccactaaggacaaagcacatcgcctgttccaagcaaac
cggtcagagctgttctcacagggctgtgaggacttgaacaaatggatggatgagctggaa
tcacagctgcatgctgaaaactttggaaaggatttaactagtgtcaatattctgctgaaa
aagctacagatggtggagaaccaagtggaagtgcgagagaaagaggtggaggaacttgtg
ggtcaggccagaattctctccgaagaaggacagttggtgacagatgagaaggaaaatgat
atagagaagagattcttgcagctgatggcccccctgcagaaacgccgtcaaaatcttctc
atgtcgaagatgagttaccagttttaccgggatctggaagatgaatctctttgggtgaag
gaacgaatgcctttagccacaaacacagaccatggccacaatctgcaggcagtgcaactt
ttaatgaagaagaataagacatttcagaaggaaattcaaggtcatcagccacgtatagat
gatgtgttggaaaggggagaaaagatgattgtggatcagagaccagatgcaggtactatc
aaggaacaattgaaagaattaaatggattgtgggccaaactgcaggaagaaacagaagaa
agacagaagcgcctggagagtgcaaatgaagcccaacaatattatctcgatgctgcagaa
gctgaagtttggatgagtgagcaggagctgtacatgatctctgatgataaaccaaaggat
gaagatagtgcgacctcaatgttgaagaaacaccagatcctgcagcaggctatcttggat
tacggaaatatgattcaagagcttgccaacagggcccaaatacttctggctgctgagcac
ccggagggtgagcagattattaggcgtcaaggacaggtggacaagcagtatgccggactc
agagatttaggaaatgagcgccagaaaaaactggacgatatgcacaatctcttccagttg
aatcgtgaggtgatagatctggagcaatggattgcagaaagggatctagcagcatcttca
caggaattaggacaagactttgaccaagttacaatgctgagggaaaagttccgtgagttt
gcccgagacactgggacgattggtcaggagagagtggacagcgtcaatatgttgattgac
gatctcattgactcgggccattcggaggcagcggacattgcggcatggaaggacagcttg
aacgaagcctgggctgacctgttggagctgatagacacccggacacagctgctggccgcc
tcctatgaactccacaaatatttctacgatggcaaagagcttttgagcctgatccaggaa
aagcacgaggaattgccagaggaactgggccgtgatgccaacacagcagaatctttccac
agaatgcacaacacgtttgaaagagatattcattccctgggtgtaaaggttcagcagttc
caagatgacgcaggacgtttgcagacagcctatgcaggggataaagctgcagcaatccag
aaacgagagcaggaggtggttgaggcctggaaggcacttttggatgcttgtgattgtcgg
cgtacccagttaattgatacagctgagaaattccgctttttcagtatggtccgggatttg
atgtcatggatggagagcatagtaaggcagattgaaacagaagagaaaccacgggatgtc
tcctctgtggagctactgatgaaataccatcagggaatcagagcagaagttgacgccaga
aacaggaattttgtgtcctgtattgacctgggcaagatgatgttagcccgcaaacatcgt
gcttctgatgagatcaaagagaagttgatacaacttacagagaacagaaaattgatgatg
gataagtgggatgaacgttggtactggttacgcctcttgctggaagtatgtcagtttgca
agggatgcttcagttgctgaagcgtggctgatttctcaggagtcctatctcagcagccgt
gatctgggcaataatgtgggtgagactgaaaaactgatcaagagacatgaggcatttgaa
aaatcaacagctacatgggacgaaaggtttgaggcactggaaagactcaccactttggag
ttactggagattcagaaacaacaagaagctttcaagcggagcaaggaagcacaagtagtg
ccggaggaacaagtcgatcatgagcaaagaacacctgttccaactcgtgaggagaaggaa
cagaaagaagggtggaaggttgaagaccaggaagcaacggaaataactccccatgtaaca
gaagagccatcactgataactacatcggaagatctgtccaccatggtaaatggtactgac
agcccagaagataaagcattagagagtgaagaaaaatcattgtttgaagagaagcctaat
gagagggtctccaagcttccacctttgatattaccagcagtggaaattgaaaagcccaga
acttcatctacccttcccagttttacctcaatggaagatattgtccaagtgggaggatat
ctgggacgtaaacatgaactggaaggacataacaagaaggcatcaaacaggtcatggatc
accttatattgtgccctgaagaatggtgaattttgcttctacaaggatatgaagaattgc
agtgcaggtgtaacataccatggagatgatccactgaatctgaaaaacgccatttgtgaa
gtggctgctgattacaagaagaagaaacacgtgtttaaactgcggttgaacaatggtaac
gagtacctgttccactgcaaagatgaagaggagctgcacaactggatccacaatctcaac
atagccatcgcagagcatggcaagccacagaatgcaaaacaggaggatgccaggtcacat
accctccctctcccctctgtgattgtccaagaaacaagccccggcaaaaaggacaaagag
aagagattcaatatttttgcaaaaaagaaatga
DBGET
integrated database retrieval system
