Leucoraja erinaceus (little skate): 129700373 Help Entry 129700373         CDS       T09122                                  Symbol actn1 Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism leri  Leucoraja erinaceus (little skate) Pathway leri04510   Focal adhesion leri04517   IgSF CAM signaling leri04518   Integrin signaling leri04519   Cadherin signaling leri04520   Adherens junction leri04530   Tight junction leri04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:leri00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     129700373 (actn1)    04518 Integrin signaling     129700373 (actn1)    04519 Cadherin signaling     129700373 (actn1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     129700373 (actn1)    04520 Adherens junction     129700373 (actn1)    04530 Tight junction     129700373 (actn1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     129700373 (actn1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:leri04131]     129700373 (actn1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:leri04812]     129700373 (actn1)    04147 Exosome [BR:leri04147]     129700373 (actn1) Membrane trafficking [BR:leri04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     129700373 (actn1) Cytoskeleton proteins [BR:leri04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      129700373 (actn1) Exosome [BR:leri04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    129700373 (actn1)   Exosomal proteins of colorectal cancer cells    129700373 (actn1)   Exosomal proteins of bladder cancer cells    129700373 (actn1) SSDB OrthologParalogGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 U3_assoc_6 XisI Motif Other DBs NCBI-GeneID:  129700373 NCBI-ProteinID:  XP_055496773 LinkDB All DBs Position 9:51073773..51276202 Genome browser AA seq 894 aa AA seqDB search MDHYESNHSQTEDYMQPEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKADTQIESIEED FRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIAGKGVKLVSIGAEEIVDG NAKMTLGMIWTIILRFAIQDISVEQTSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLG FCALIHRHRPELIDYAKLRKDDPYTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAI MTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEQYEKLASDLLEWIRRTIPWLE NRSPDNTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEG KMVSDINNAWGSLEHAEKGYEEWLLNEIRRLERLDHLAEKFRQKAVIHEAWSNGKEDMLM AKDFETATLSEVKAILKKHEAFESDLAAHQDRVEQIAAIAQELNELDYWDSPSVNERCQN ICDQWDNLGALTQKRRDALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIV HTIEEIQGLITAHEQFKATLPEADRERQAILGIHNEVSKIVQTYHVNVAGSNPYTAISPQ DINGKWEKVRQLVPQRDHALTEENARQQSNERLRRQFATQANVIGPWIQTKMEEIGRISI EMHGTLEDQLNHLQQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWE QLLTTIARTINEIENQVLTRDAKGISQEQMNEFRASFNHFDRDHSGTLGAEEFKACLISL GYDIGNDAQSEAEFGRIMNIVDPNNMGVVTFQAFLDFMSRETTDTDTADQVMTSFKVLAG DKNYITAEELRRELPPDQAEYCIARMAPYTGPDAIPGSLDYMSFSTALYGESDL NT seq 2685 nt NT seq  +upstreamnt  +downstreamnt atggatcattacgaatcgaaccactcgcagactgaagattatatgcagccggaggatgac tgggacagagaccttttattggacccagcctgggaaaagcagcagagaaagaccttcaca gcctggtgtaactctcatctccgcaaggcagacacacagattgagagcatcgaggaagat tttcgggatggccttaagctcatgctgctcctggaagttatatcaggtgaacggttggcc aaaccagaaagaggaaagatgcgtgtccataaaatatcaaacgtcaacaaagcactggat tttattgcaggcaaaggagtgaaacttgtttcaattggagctgaagaaattgtggatggt aatgcaaaaatgacacttggtatgatctggacaatcatcctccgatttgccattcaggac atctctgtggagcagacatctgcaaaggaaggattgctgctctggtgtcagcgcaagaca gctccttacaaaaatgtcaacatacagaactttcacatcagctggaaggatggccttgga ttctgtgcgcttatccatcgacaccggcccgagctgattgactatgcaaaactgcgaaag gatgacccttacaccaacctcaacaccgcctttgatgtggcagaaaaatatctggacatt cccaaaatgttggatgctgaagacattgtgggtacagctcgcccggatgagaaggctatc atgacttatgtctctagcttctaccatgcattttcaggagcccaaaaggcggagacggca gccaatcggatctgcaaagttctggcagtgaaccaggagaacgaacagctgatggagcaa tacgagaagctggccagtgatctcctggagtggatccgacgcaccatcccctggctggag aaccgctccccggacaacaccatgcaggccatgcagcagaagctggaagatttccgagac taccgccgcctccacaagccgcccaaggtccaggagaagtgccagctggaaatcaacttc aacacgctgcagaccaagctacggctcagcaacagacctgccttcatgccgtccgaaggg aagatggtgtcggatatcaacaatgcctggggctcattggagcatgcggagaagggttac gaggagtggctactgaatgagatcaggagattggaacgactggaccacctggcggagaag ttcagacaaaaagcagtgatccacgaggcctggagcaatgggaaggaggacatgttgatg gccaaggattttgagacggccaccctgtcggaagtcaaggctatactgaaaaagcacgag gcctttgagagtgacctggcagctcatcaggaccgtgtggaacagattgctgcaattgcc caggagctgaatgagctggattattgggactctccgagtgtgaacgagcgttgccagaat atctgtgatcaatgggacaatctgggagccctgacccagaagaggagagatgccttggag aggacagagaagctcctggaaactattgaccaattgtatctggaatatgcaaagagggct gccccctttaacaattggatggagggggcaatggaagacttgcaggacactttcattgtt catactattgaggaaatccagggactgatcacagctcatgagcagttcaaagcaactctg ccagaggcagaccgtgaacgccaagctatcctggggattcataacgaggtgtcaaagatc gtccagacctaccatgtcaacgtggctggtagcaacccctacacggccatcagtccacag gacatcaatggcaagtgggaaaaggttcgacagttggtgccgcaaagggaccatgctctg acggaggagaatgctcggcaacagtccaatgagagactgcggaggcagtttgcaacacag gccaacgtcattggcccttggattcagacaaagatggaggagattggccgtatttccatt gagatgcacggcacattggaagatcagctgaaccacctccaacagtacgagaagagcatt gtcaactacaaaccaaagattgatcagctggagggagaccatcagctcattcaagaagca ctgatctttgacaacaagcacaccaactacaccatggagcacatccgggtgggttgggaa cagttgctcacgaccattgccaggacaatcaatgaaattgagaaccaggtcctgaccagg gatgccaagggcatcagccaggaacagatgaatgagttccgagcctccttcaaccacttt gacagggatcactctggcaccctcggagcagaggaattcaaagcctgcctcatcagcttg gggtacgatattggaaatgatgcacagagtgaagcagagttcggacgaatcatgaatatc gttgatcccaacaacatgggagtcgtaacattccaggctttcctggactttatgtctcgg gagaccacagacacggacactgccgaccaggtcatgacctcgtttaaagtcctagctggc gataagaactacatcacagccgaggagctgagacgcgagttgcctcctgaccaggcagaa tattgcatcgcgaggatggcaccctacaccggaccggatgctatccctggctcgctggac tacatgtccttctccacagcgctgtatggtgaaagcgacctctaa

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