Leucoraja erinaceus (little skate): 129700374
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Entry
129700374 CDS
T09122
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03040
Spliceosome
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129700374
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129700374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129700374
Spliceosome [BR:
leri03041
]
Common components
Common spliceosomal components
SR proteins
129700374
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
DUF7376
Motif
Other DBs
NCBI-GeneID:
129700374
NCBI-ProteinID:
XP_055496779
LinkDB
All DBs
Position
9:51324620..51334046
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AA seq
283 aa
AA seq
DB search
MSSRVFIGRLSPHATERNVEKFFKGYGRIKEIDLKNGFGFVEFEDYRDAEDAVYELDGKE
LCNERVTVEHARARPRGGRGGGRFQGRFSQRWSRSSGGGRNGPPVRTENRVIVENLSSRV
SWQDLKDFMRQAGEVTFADAHRHKLNEGIVEFASYSDLKNALDKLSGTELNGRRIRLIEE
RKQYRSRTRSRSRSRSSSRSRSRTRSRSRSRGRKSYSRSKSRSRSKTRSRSRSPVPAKEQ
KGRSPSPAKSPSAERPRSRSRSRSRSRSKSRSRSRSPSAESAE
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccgagtgttcatcggtagactgagccctcatgctactgagagaaacgtggaa
aaatttttcaaggggtatggacgaattaaggaaattgatttgaagaatggttttggattt
gtggagtttgaagattacagagatgcagaagatgcagtgtatgagctggatggaaaagaa
ttgtgcaatgaaagagttacagttgaacatgcccgagctcgccctagaggaggtcgtgga
gggggacggtttcaaggtcgttttagccaacgttggtcccgtagtagtggagggggaaga
aatggacctccagttcggacagaaaaccgagtgattgttgaaaatctgtcttcaagagtt
agctggcaggatctgaaagattttatgagacaggctggagaagtgacttttgctgatgcg
cacagacacaagctcaatgaagggattgtagaatttgcctcttatagtgacttaaagaat
gctcttgacaagctgtctggaacagagcttaatgggaggaggatccgactcattgaggaa
cgtaaacaatacaggtctcggaccaggtcccgatcccgtagtcgcagttcatccaggtct
cgtagccgaacacgtagccgatctcgttcccgaggccgcaagtcctacagtaggtcaaag
agtaggagtcgcagtaaaacacgttctcgtagtagatcccctgtgcctgctaaagagcag
aagggcaggtctccttcaccagctaaatccccctcagcagaacgtccaagatctcgttct
cgatcccggtctcgttcacgatcaaaatcgcgatcccgatccagatcgccttctgctgag
agtgctgaataa
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