Leucoraja erinacea (little skate): 129700497
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Entry
129700497 CDS
T09122
Symbol
rbm25b
Name
(RefSeq) RNA-binding protein 25b isoform X1
KO
K12822
RNA-binding protein 25
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129700497 (rbm25b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129700497 (rbm25b)
Spliceosome [BR:
leri03041
]
Complex A
U1 snRNP components
U1 related factors
129700497 (rbm25b)
Complex B
129700497 (rbm25b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
129700497
NCBI-ProteinID:
XP_055497012
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All DBs
Position
9:64737068..64802258
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AA seq
878 aa
AA seq
DB search
MDRRHLGSGPFFRLKVAENMSFPPHMNRPPLGIPPLPPGIPPPQFASFPPSVPPGSRFPH
EKHPLNIYCVKPLQNRAPMIPVPMGLMTPATTAASYRHPSLQVSMLYTMNRCPTEGKQCF
TQVLMPASVPLIGKHIGPRKDHVGQRIRETDDNSGPTTTVFVGNISEKASDMLIRQLLAK
CGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHELQVGDKKLLVKVDAKTKAQL
DEWKAKKKGVNGDTKTEDSSDDVVDEETKRRDQIVKGAIEGLIREYSSELNAPSQDQDAH
PRKKKKEKKEEDDINAMEMEEDKRDLISREISKFRDTHKKLEEEKGRREKERQEVEKERR
DREKERERERERREREKEREKEKERERERERERERERERDRDRDRDRDRDRERTKDKERE
RDRERDRERDKERERSRDRERSKDRSRSSYLDVMEICREKSREKEKKRDREEDEEEMYER
RKLERKLREKENAYQERLKNWEIRERKKSRDYEKETEREEERRREMTKEAKRLKEFLEDY
DDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEEHEEIRQRLLAEGHPDPDAELQ
RMEQEAERRRQPPIKQEPESEEEEEEEEKPEKEERRMEEEEEPEQKPCLKPTLRPISSVP
SVSSASGNATPTTPADESPCGIIIPHENSPDQQQEEQRPKIGLSLKLGGSNSPSQPISVK
RKKLPVDSVFNKFEDEDSDEVPRKRKLVPLDYSEDEKGASKGNVNTEEKRKHIKNLIEKI
PTAKPELFAYPLDWSIVDTNLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQ
SILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggacagacgccatctggggtcaggaccgttcttcagactcaaggttgctgaaaacatg
tcatttccaccgcatatgaatcgtcctcctttggggatacctcccttgccaccgggtatc
cccccgccacagtttgcaagctttccaccttccgtgccacccggttcgcgtttcccacat
gagaaacatccactcaacatctactgtgtcaaaccccttcagaatcgggcaccaatgatt
cctgttcctatgggactaatgactcctgccacaactgcagcaagttacaggcacccatca
cttcaggtctccatgctgtacaccatgaaccgttgcccaacagagggcaaacagtgtttt
acacaggtgttgatgccagcctctgtgcctctaattggaaagcatattggaccaaggaag
gaccatgttggtcagaggattcgtgagactgatgacaatagtggtccgaccacaacggtt
tttgtaggcaacatatctgagaaagcttctgatatgttaatcaggcagttacttgcgaaa
tgcggcttggttttaagctggaagagagtccaaggagcttcaggaaagttgcaagcattc
ggcttttgtgagtataaagaaccagaatctacactgcgtgcattaagattattgcacgaa
cttcaagttggagacaaaaagttgcttgtaaaagttgatgcaaagaccaaagcccagctg
gatgaatggaaggccaaaaagaaaggagtcaatggagatacaaaaacagaggattcatct
gatgatgttgtggatgaggaaaccaagagaagagatcagattgttaagggagcgattgaa
ggattaataagagaatactccagtgaactaaatgcaccttcccaagaccaagatgcacat
cctagaaagaagaaaaaggaaaagaaagaggaggatgacataaatgcaatggaaatggaa
gaggataaacgagatctaatttctcgagaaattagcaaattcagagacactcacaagaaa
ctagaagaagaaaaaggaaggagagaaaaagaaagacaagaagttgaaaaagaaagaaga
gatagagaaaaggagcgcgaacgagaaagagaaaggagagaaagagagaaggaacgtgag
aaagaaaaggagcgtgaacgggagcgagagcgtgaacgagaacgggagcgagagcgggat
cgcgaccgtgatcgcgaccgggaccgtgaccgtgagagaacaaaggataaggaaagggag
cgagaccgtgaaagagatcgcgaacgggataaagagagagaaagaagccgggaccgggag
agaagcaaggatcgaagtcgatcaagttacttagatgtaatggaaatttgcagagagaaa
agccgagaaaaggagaagaaaagagatcgggaagaagatgaagaagaaatgtatgaacgc
cggaaacttgagagaaagctccgtgagaaagaaaatgcataccaagagcgtcttaaaaat
tgggaaataagggaacggaagaaatccagagattatgaaaaggaaactgaaagggaggaa
gaaagaagaagagaaatgacaaaagaggcaaaaagactgaaggagtttttggaagattat
gatgatgatcgagatgatccaaaatattacagagggagtgctttgcagaaacgcttaagg
gatcgagaaaaagaaatggaagcggatgaaagagatcgcaagcgagagaaagaggaacac
gaggagattcggcagcgtttgttggctgaagggcaccctgatcccgatgcagaacttcag
aggatggaacaggaggcagagaggcggcggcagccgccgatcaaacaagagccagaatcc
gaggaggaagaagaggaggaagaaaaaccggagaaagaggaacgccgaatggaagaggaa
gaagagcctgagcagaaaccctgtcttaaacccacattgcgccctatcagttctgtccca
tctgtttcatcggcaagtggcaacgctacaccgactactcctgcagacgagtctccttgt
ggcattatcattccacacgagaactctcctgatcaacagcaagaggagcagcggcctaaa
attgggctcagcctgaaactaggtggctccaatagcccgagtcagccaatttcggtgaaa
agaaagaaacttcccgttgatagcgttttcaataagtttgaagatgaagatagtgacgaa
gttcctcggaagcggaagctcgtccctttggattattcggaagatgagaagggtgcctcc
aagggaaatgtaaatacagaagaaaaacgaaaacacataaaaaacttgattgagaaaatt
cctacagctaaaccagaactttttgcctatcctcttgactggtctattgtggacacgaac
ttgatggacagacgcattcgaccatggatcaataaaaaaataatagaatacattggggaa
gaagaagcaacgttagtggactttgtttgttctaaggtgatggcccacagttcaccacag
agcattttagatgatgtagccatggttctggatgaagaagccgaagtcttcatagtgaag
atgtggaggttattaatatatgaaacagaggctaaaaagataggacttgttaaatag
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