Leucoraja erinaceus (little skate): 129700504
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Entry
129700504 CDS
T09122
Symbol
sptbn5
Name
(RefSeq) spectrin beta chain, non-erythrocytic 5
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04517
IgSF CAM signaling
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129700504 (sptbn5)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129700504 (sptbn5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129700504 (sptbn5)
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129700504 (sptbn5)
Intermediate filaments
Intermediate filament-binding proteins
129700504 (sptbn5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
Motif
Other DBs
NCBI-GeneID:
129700504
NCBI-ProteinID:
XP_055497034
LinkDB
All DBs
Position
9:65168549..65385862
Genome browser
AA seq
2917 aa
AA seq
DB search
MDEEFEKGRIKELQQQRMTVQKKTFTNWINQIFSKNQVKFFVNDLYIDLKDGIILISLLE
LISGEKLKRPSRGRMRVHYLENNSIAITFLRTKINVRLIAPENVVDGDRTLILGLIWMII
LRFQIASITVEEDECDASSAKRSAKEALLIWCQRKTADYKNVDIKNFSSSWNDGLAFNAI
IHAHRHDLVDYKSLKPNYPVHNLNKAFDVAEKALGIHTLLDAEDVAVPHPDEKSIMTYVS
QYYHHFSKMRQGQTGQKRIIKIVDLLQEIEDLKREYQSLVSDLLDWIKEKIRELNDRKFP
NSLKGMRRLMADFKFFRTVVKPPKYQERRGIIEAQLFNIRTRQRANNMRQYVPPEGKALS
DIERHWSSLEKSESSREKALQQEMLRLERLEQLVQRFQKKAMLRESYLSHMTSVLDQQNV
NAESMQEAEAVNKRLEAITTDVFAMEQRFKDLIEMGQVIERENYHGRAAIMKKQQDVETC
WQNLLQKLNKYRESLKNVSAALSLMQDIDTIYQELIALQSVVSSDDYGKHLFDVVDMAQK
HNLVVSQISAHGETLKHISQRVDDLRRCSELRTDVVKRKLKALNGLYSNLLECSKARHCK
LQQQQILYEFFRDSEEEESWIYERWQLVRTAALGRDITQIAVSIQKHKALEAECNSHQSI
CFSMVRKGQELCKENLNSKREVRKWVTTLQKQWQHLMDELSNRNARLQAALAIKQYFADI
NEAHSWLLEKQPLLQTADCGKDEASAEALLQRHMHLTEEMEAYSSEVTRLGDQATAALEQ
VPLTVCQAETPEKEVSESCSSDEGERSEITKKNHSQTVDTLAPTNVNKQQNRTAKDSIQP
LNKHEEAESEVATKGSPLQRVSKPRRSRSMRRGTTEIQYTSHTLPDEDFSRTSIERSQHD
IESSYASLCQLAEARRKALQEMIQLYHFHNTCNDFISWMNDVENGFQTFVPNVNNMEATQ
RKYENFLTELVAGKGRLDEIDRLVGNFIESGHSKDREILEKQQMIHKRWDTMLALKEEKG
KELMGTADVQSFLQKCQDTTALLQDKLALLSIPDPSSSLKAVDEARRKQLTSNREIQSLE
GTIAYLIQMAHLIQDASPAESAAIMLQVQELEALLQSVKAEASRKKQLLRDSHDLQRYNQ
ESKELLLWASAMKEKMKSKEMGFDVDSAENLLKEHADLLLEINSHKNSFQKLNDLGNQVV
KRTPSGDVSRLLQKMMGLQVELDDAWKERNAELEEGLALQQFNHEADRIEATLSSHDAFL
KIGDLGDSVGSVSSLVKRHEDFENVLKWTDQRIQGIQDRASKLNQSNNYANKTIQKRVFL
IIDRWSDLKRSSDYRRNRLSESQKLQEFHRDAAELLMWIDEKYVVASDESYRDPANILRK
LKRHEAMEKEVMANQIRADDLKQTGNNLINQNHYARDAIKSRLVALNEKWEELLDKMGER
GDKMRQAGQQEQLMELLKDAKAKLDQIEKILQSNDTGRDLRSSRRLLKEHKWLEGDMREL
AEKMNSIVNRAKKMATGHFDSQRILEQTQKHLDWFESLKIPLKQRRKLLEAMVALYEFHH
NSDLEMKWIAERMPNASSSNFGNSVDAAQSLLQKQKELQVEVKTHKQQIQKVLEAGKRMI
SSQHFMAHGIEGQCTELQSSWEGLERACDDRGKKLQRSVQFNQFLADVSELDTWAAEKLQ
LVSSEDCGKNEAVSQKLVKNHRSLKGQIQNTQGLAEELQKNSQELPLRGLITFDMVDEPQ
EHLRQRLKELQDLWSTRMQKLEQTLVFHECVREMGELEEWIAQQFQAASSEDYGNDHQHV
LHLQALFEAFQHQVETGDERVHGCETLVNVLVEKGHLQSKEIVQRLNLLRDLWSSLQKQI
HKRGQKLRDAAEFHKCSQDLADALTNIEEKRKSIPDDIASDRQSVQAQLHVHEGLEHELP
GVEQQLQELVDVADGVLHRCTMQQSVALQAQQQAVVENWESLRSKVEQRRELLEQACKIQ
QFLALVRDYFSWSAGLTREMKLEETTRDSSTTDLKLNQHQQIRAEIDAREEVFGHLVSLG
HEILQVEPSNSREVQDKVDSLQKERSDLYSQWEHKRGWLEKMYLEQVFFRDVAHMEKIMN
GQEVYLRASDLGTTVDTVDSLIKRHDAFEKLLATQEEKVTSLQEQAGSLTEERLKRDDAS
HIQQKLNAILERRNRIKELSQNRKRDLSTARLLARFSQDLAEEKGWITERMQKLKDNTST
DISDLQGKLKLLQKHQAFEAEILAHQAIITNVTEIGELLLSGHHPKSNEIHRSLRQLLDS
WEQLKVAVAARGKMLEENRDFLEFLQKVEQVEAWIREKEVMISVGDVGKDYEHCLQLQKK
LNKFRGTGDVTVDDAHIRTINSLAIKLEKRNKDDLVTILQRKQQLNERWNSFQGNLTKYR
KELAAALEVHAFIREMDEITERMGEKSLMMQGLDYGRDVENVEKLIRKHKETELEITVIR
DKKEALEADARPLCEFRFPLSDKLSLKKGEMQNRWLQLKKEAKVRKEKLEASYQLQKFNR
TVLELIDWAHWMKALVGERRLAMSKREAESMIDEHQERKTEIQARGERFDAVKNVAVGLV
AEGHYASTDIKQSLSKVEETWTTLNEAWHERSHRLAEAWDLQIFYGYAEQSESWLSSKEA
ILANEDYGDSLPRIENLQQKHKQFEKTMENQLDKVNVVERYALQLKQNKHSDSAQIITKC
QAILQRKQKLMENCEHRGKLLNQSKQLQIFLRSSYEAASWLNEKLSVALDKNWMDPSNLQ
GKLLKHQSFEAEIMANQNRIQSINTEGEQLINDGHYAVHEIEPRMKQIQDLWNELLLSCN
EKKFQLMNAHKALNLQRSIEDVEKWLSEVEKQLDLPAQGVDLVSVRNLLNKQQELEEDIS
SYVERMQGLLDQSEDFVHKKHFIAEEIRDRVDVVLHR
NT seq
8754 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagtttgagaaaggtcgcatcaaggagcttcagcagcaacggatgactgtg
cagaaaaaaactttcaccaattggataaaccagatattttccaaaaaccaggtgaagttt
ttcgttaatgatttgtacattgatctgaaagatggaatcatcctcatttctctcctggaa
ctcatctcgggagagaaactgaagagacccagcagaggtagaatgagagtccactacctg
gagaacaacagcattgccattacctttttgagaaccaagataaacgtgagactgattgca
cctgagaatgttgtggatggtgaccgcaccctgatcctgggtctgatctggatgattatt
ctacgtttccaaatcgcctccatcacagttgaagaagatgagtgtgacgcaagcagtgcc
aaacgttcggccaaggaggctttgttgatttggtgccaacgaaagactgccgattataaa
aatgttgacataaagaacttctcatcgagctggaatgacggactggccttcaatgcaatc
attcatgcacatagacatgatctggtagactacaagagcctgaaaccaaactacccagtg
cataacctgaataaagccttcgatgttgcggagaaagcactgggcattcacacactccta
gacgcagaggacgtggctgtccctcatccagacgagaagtccattatgacctatgtctct
cagtattaccaccatttctccaaaatgcgacaaggccaaactggacagaagagaattata
aagattgtggatctcttgcaggagattgaagatctcaaacgtgagtatcagtcgctggtg
tctgatctgctcgactggatcaaagaaaagatcagggagttgaatgaccggaagttccct
aactcgctgaaaggcatgcggagactgatggcggactttaaatttttccgcactgtggtg
aaaccgcccaagtaccaagagcggcgggggatcatcgaggctcaactcttcaacatcaga
acaaggcaaagagccaataacatgcggcagtatgtgcctccagagggcaaggcgctgagt
gacatcgagaggcactggagcagcctggagaagtcggagtcgtcgcgggagaaggcattg
caacaggagatgctgaggctggagcggctggagcagttggtgcagaggttccagaagaag
gccatgctaagggagtcttacctcagccacatgacatcggtgctcgaccagcagaacgtc
aatgccgagtccatgcaggaggcagaggctgtcaacaagaggctggaggccatcactact
gatgtgtttgccatggagcagaggtttaaggacctcattgaaatgggtcaggtcatcgag
agagagaattatcacggcagggctgcgataatgaagaagcagcaggatgttgaaacttgc
tggcaaaatctcctccaaaaactgaataaatatagggaatccctcaagaacgtgtctgct
gcactctctctaatgcaagatatcgacaccatctatcaagaactcatagctcttcagtcc
gtggtgagttcagatgattacggcaaacacctatttgatgtcgtggacatggcgcagaaa
cacaacctggtcgtctctcagatctcagcccacggagaaaccttgaagcacataagccag
agagttgacgatctcaggaggtgcagtgagttgaggactgacgttgtcaagaggaaactg
aaggcactcaatggtctctacagcaatctcctggaatgcagcaaagccagacattgcaaa
ctgcagcagcagcagatcctgtatgaatttttccgagacagtgaggaggaggagtcgtgg
atctacgagaggtggcagctggtgcggacggctgccttggggcgagacatcacccagatt
gcagtgtcaatacaaaagcacaaggcgttggaggcagagtgcaactcccaccagtctatc
tgtttctcaatggtgagaaagggccaagagttatgcaaagaaaatctgaacagcaagagg
gaagtgaggaaatgggtgacgactcttcagaaacaatggcaacatttaatggacgagctg
tcgaaccgaaacgcacgactccaggctgccctggcgataaagcagtattttgcagatatc
aatgaggcccattcctggctgctggagaaacagcctcttctgcagactgcggactgtggg
aaggatgaggccagtgctgaagcactcctgcagcgccacatgcacctcacagaggagatg
gaagcgtattccagcgaagtgacgagactcggtgaccaggcgacagcggcactggagcaa
gttcctctgacagtgtgtcaggctgagaccccagagaaagaagtgtccgagagctgctca
tccgatgaaggggagcgatcggagatcacaaagaaaaatcattctcaaacagtcgacacc
ttggcccccactaatgtcaataagcagcagaacaggactgccaaagacagcattcagcca
ctgaacaagcacgaggaggcggagagtgaagttgccaccaagggcagcccattgcagagg
gtcagcaagccgagacggagccgttcaatgcgtcgtggcacgacggagatacagtacaca
tcacacacgttgcctgatgaggacttcagcaggacaagcattgaacgtagccagcatgac
atcgaatcatcttacgccagtctctgccagctagctgaggccagaaggaaagccctgcaa
gaaatgatccaactctaccacttccataacacctgcaatgacttcatctcctggatgaat
gacgtggagaatggtttccaaacctttgtgcccaacgtaaacaacatggaagccacgcag
aggaaatacgagaatttcctgaccgagttggttgctgggaaaggcaggctggatgaaatc
gaccgactcgtgggtaatttcatcgaaagcggacacagcaaggatcgggaaatcctggaa
aagcagcagatgattcataaaaggtgggatacaatgttggctttgaaggaggagaaaggg
aaggaactgatgggcacggcggacgtccagtccttcctgcagaagtgtcaggatacgaca
gctttgctgcaggacaagctcgctctgctgtccattcctgatccaagcagcagtttgaag
gcagtggatgaggcaaggcgcaagcagctcacatccaaccgtgagatccagtcactggag
ggcacaatagcatacctcatccaaatggctcatttgatccaggatgccagcccggcagag
agtgctgcaatcatgctgcaggtgcaagagttggaggcgctgctgcagagtgtgaaggcg
gaggcctcgaggaagaagcagcttctgagagacagccacgatctgcagcgctacaatcag
gagagcaaagagctactactgtgggccagcgccatgaaggagaagatgaagagcaaagag
atgggatttgacgtggactctgccgaaaacctactgaaggaacatgctgacctgctgctg
gagatcaactcgcacaaaaacagcttccagaagctgaatgacttggggaatcaagtggta
aagaggaccccctccggcgacgtttcccgattactgcagaaaatgatgggtctacaggtg
gagctggatgacgcatggaaggaacgcaacgccgaattggaggaaggacttgcgctgcag
cagtttaaccacgaggcagatcgcatcgaggcaactctgtccagtcacgatgccttcctg
aagatcggtgatcttggggactctgtgggctccgtaagcagcctagtgaagaggcatgaa
gactttgagaatgtgctgaagtggacagaccagaggattcaggggatacaggaccgagcc
tctaaactcaaccagagcaacaactacgccaacaaaacgatccagaagagagtttttctg
atcattgacagatggagtgatcttaaacggagcagtgactatcggcgaaacaggctgtca
gagtcgcagaaacttcaggaatttcacagagatgcagctgagctcctgatgtggatcgat
gaaaagtacgtggttgcctccgatgaatcataccgggaccccgcaaacatcctgcgcaaa
ctgaagcgacatgaggccatggagaaggaggtgatggcaaaccagatacgagcggatgat
ctgaagcagacaggaaacaatctcatcaatcagaatcattatgctcgagatgccatcaaa
tcgcgacttgtggcgctgaacgagaagtgggaagagctcctcgataaaatgggggaacgt
ggagataaaatgaggcaagctggacaacaggagcagctgatggaactactcaaggatgcg
aaagcaaaacttgaccaaattgagaagattctccagagcaatgacacgggccgtgatctg
cgatccagcaggcgcttactgaaggaacacaaatggctggagggtgatatgcgtgaactc
gccgagaaaatgaacagcattgtcaatcgtgccaagaagatggcgactggtcactttgac
tcacagaggatactggaacagacgcaaaaacatttagactggtttgaatcactcaagata
cctctgaaacagagaaggaaactcctggaagcaatggtggccctatacgagttccaccac
aacagtgatttagagatgaagtggattgctgaacgcatgcccaatgcttcttcaagtaac
tttggcaattctgtggacgcggctcagagcttgctacagaaacagaaggagttacaggtt
gaagtgaagacccataagcagcagatccagaaggtactggaggctggcaagcgtatgatc
agctctcagcacttcatggcccacggcattgagggccagtgcacggagctgcagagcagc
tgggaaggactggagagggcctgtgacgacagggggaagaaattgcagcgatcggtacag
ttcaaccagttccttgcagatgtttccgaactggacacctgggcagcagaaaaacttcaa
cttgtgtcaagcgaagattgtgggaagaatgaagctgtttctcagaagctggtcaagaac
cacaggtctctcaagggacagatccagaatacccaaggccttgccgaggagctgcaaaag
aattcccaggagcttccgctccgagggctcatcacgtttgacatggtagatgagcctcag
gagcaccttcgacagcggctgaaggagctgcaggatctttggtctaccaggatgcagaag
ctggaacaaacgctggtattccatgagtgtgtgcgggaaatgggggagctcgaggaatgg
atcgcacagcagtttcaggcggccagctctgaggattatggaaatgatcaccaacatgtc
ctgcacctgcaggcattgtttgaagccttccagcatcaagtggagacgggagatgagcga
gtccatggttgtgaaaccttagtaaacgtacttgttgaaaaaggccacctgcagtcgaag
gaaattgtccagaggctgaatctgttgagggatttatggagcagtctgcagaagcaaatt
cacaagaggggacagaagctacgcgatgctgcagaatttcacaagtgcagccaagacctg
gctgatgccctcaccaacattgaggagaaacgtaaaagcattcctgatgacattgcaagt
gatcgtcagagcgttcaggcacagctacatgtacatgaagggctggagcacgaactgcca
ggggttgagcaacagttgcaggagctggtggatgttgcagacggtgtgttgcacaggtgc
accatgcagcagagcgtagccctgcaggcccagcaacaggcagtggttgagaactgggag
agtctcaggagtaaagtggagcagcgaagagaacttctggagcaggcctgtaaaatccaa
cagttcctggcgctggtacgggactacttctcctggtcggctgggttgacaagagagatg
aagctggaggaaacgaccagagacagctccacgactgatttaaaactcaaccaacaccag
cagattcgggctgaaatcgatgccagggaagaggtgttcgggcatttggtcagcctcggc
cacgagatcctgcaggtggagccatcaaactccagagaagtccaagacaaggtcgatagt
ctgcagaaggagaggtcagatctgtacagtcagtgggagcacaagaggggctggctggag
aagatgtatctggagcaggttttcttcagggatgttgcccacatggagaagatcatgaat
ggtcaggaggtttacttgagggcgagtgacctgggaacgactgtggacactgtggactcg
ctcatcaaacgacacgatgccttcgagaaattactggcaacccaggaggaaaaggtgacg
tcactgcaggagcaggcaggctcgttaacagaagagcgtttgaaacgtgacgatgccagt
cacattcagcagaagctcaatgccatcctggagaggaggaaccgcattaaggagttgtca
cagaaccgcaagagagacctgagcactgcccgcctgctggcacgcttcagtcaagacctg
gctgaggagaagggctggatcacggaaaggatgcagaaattaaaggataatacctctaca
gacatcagcgacctgcagggcaaactgaagctgctacagaagcaccaggcctttgaggct
gagatcctggcccaccaggctattattacaaatgttactgagataggtgaattgctacta
tcgggccatcatcccaaatccaacgaaatccaccgcagtttgcggcagctcctggacagt
tgggaacagctgaaggtagcggtggctgcacgcggcaaaatgttggaggaaaaccgggat
ttcctggaattcctgcaaaaagtcgagcaagtcgaagcatggatcagagaaaaggaggtg
atgatcagtgtgggagacgttggcaaggactatgaacactgcttacagttgcagaagaag
ctcaataagttccgtggaactggggacgtgactgtggatgatgcccacatcaggaccatc
aacagcctggccatcaagctggagaagaggaacaaagacgaccttgtaaccatcctccaa
cgcaagcagcagttgaacgaaaggtggaacagtttccaagggaacttgacaaagtacagg
aaagaactggccgctgccctggaggttcacgccttcatcagagaaatggacgaaattaca
gaaaggatgggcgagaagagtctgatgatgcagggactggactatggtcgggatgtggaa
aatgtggagaagctgataaggaaacataaagaaactgaactggaaatcaccgttatccgg
gataaaaaagaggcactggaagccgatgccaggccactgtgtgagttccgttttcctcta
tccgacaagctgagtctgaagaaaggggagatgcagaacaggtggcttcagctgaagaag
gaggccaaagtgcgaaaggagaagctagaagcatcgtaccagctgcagaagttcaacaga
actgtcctggagctgatagactgggcacactggatgaaagccctggtgggagaaaggaga
cttgcaatgagtaaacgggaagccgagagcatgatagatgagcaccaagagagaaagact
gagatccaagcgagaggcgagcgttttgatgccgtcaagaatgtggcagtcggactagtg
gctgagggacactatgcatcgacggacattaaacagtccctttccaaggtggaagagacc
tggacaactctaaatgaggcctggcatgagcgcagccatagactggcagaggcctgggat
ctacagatattctatggctatgcggagcagagcgagagctggctgagcagcaaggaggcc
atcctggccaacgaagactatggggattccctgcccaggatagagaatctgcagcaaaag
cacaaacagtttgagaaaacgatggagaaccagctggataaggtaaacgtggtggagcga
tacgccctgcagctgaaacagaacaagcactcggacagtgctcagatcatcaccaagtgc
caagcaatcctacagagaaaacaaaagttaatggaaaactgtgagcaccgtgggaagctc
ctaaaccagtccaaacagctgcagattttcctcagaagctcctatgaggctgcgtcatgg
ctgaacgaaaagctcagtgtggccctggacaagaactggatggatcctagcaacctgcag
ggcaagctgctaaagcaccaaagctttgaggctgagatcatggctaatcaaaacaggatc
cagagcattaacacagaaggcgagcaactaattaatgacggacattacgcagtgcatgag
attgagcccagaatgaaacagattcaggacttgtggaacgaactgctgctgagctgcaat
gagaagaagtttcagctgatgaatgcacacaaggccctgaacctgcagcggagcatagag
gatgtggagaagtggctcagtgaagtggagaaacagctggatcttcctgcccaaggcgtg
gacctggtctctgtcaggaacctgctcaacaaacagcaggagctggaggaagatatcagc
agctacgtggaaaggatgcaaggacttctcgatcaatccgaagactttgttcacaagaag
cacttcatagctgaggaaattcgggacagagttgatgtagtactccacaggtaa
DBGET
integrated database retrieval system
