Leucoraja erinaceus (little skate): 129700752
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Entry
129700752 CDS
T09122
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
leri01009
]
129700752 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129700752 (rpap2)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
129700752 (rpap2)
Protein phosphatases and associated proteins [BR:
leri01009
]
HAD phosphatases
Fcp/Scp phosphatases
129700752 (rpap2)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129700752 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
DUF2497
Motif
Other DBs
NCBI-GeneID:
129700752
NCBI-ProteinID:
XP_055497384
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All DBs
Position
10:8580844..8628919
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AA seq
658 aa
AA seq
DB search
MHTATKAQADRGKPLRRRGVARFGSDSCRRSKVGGANMAEAGRRKSSSRRGLKGATPASA
ALSGVEAQRRKVALQTALQKNHDCETKALHIVERLLEINVTEEFLLDCITFITAAHYQDV
VEERSIIKQCGYPVCQKTLEIVSKQQYKISTKANRVYDITERKHFCSNFCYKASKYLEAQ
IPKDPIWSRVQEGPPVCRLLKEQRGRAGEEVRFQTLSIQVSDVDDPSFVDDRQVSNSPRE
SDSSGYDQEFVSSVMTGEKYNVKCARHKQVKKKQHGITTKPEKTVTVPKCSETDHEVENA
AQQLKEYHVNNAETSSSRLSQNAGTDQLTFAPKEKAPLSVDQDVLPTVSLTGLKDDEKVV
ASNVTTQGLSKKGAASLKKLIAISKQRNSLCSSRSTSHVESNVIELLRQTLSEWNTGETL
RFLYGTNLKYKGTQCRLPCYATEQEQLDEDDLDSLEVVEIIHPNENIHKSIQVKKLDASV
RPLPKFEQLKQESEFLHLKVREFYKGRYVLPDNTEDNCEGNYQSTTSESNEDPFLPLVDS
EAQHHIRKGIVLDALKKVLPKLLGPCQLSMSDIFSQLNSLVKTFRLTNTNIIHRTPEWTL
IAVVLFSVLDVKVSPLQESLQTLASEPFVSTILKEFHIQIQELENLKNIFKCHDSDRG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagcgactaaagcgcaggcggatcgagggaagccgctccgccgccgtggggtt
gcgcgctttgggtctgacagctgccgtcggtcaaaggtcggcggagccaacatggcggag
gccgggcggcggaagagctcgagccgcagagggttgaagggcgcgacaccggcgagcgct
gcgctgagcggcgtggaggcgcagagaagaaaagttgcattgcagaccgctctacagaaa
aaccatgattgtgagacaaaagctcttcacattgttgaacgtctccttgaaataaatgta
acggaagaatttctgttggattgtataacatttattactgctgcccattatcaggatgtt
gtggaagaacgttccataattaagcagtgcggttaccctgtttgtcaaaagacactggaa
attgtatctaagcagcagtacaaaatatctacaaaagcgaatcgagtttatgatatcaca
gaaagaaagcatttttgcagcaatttttgttataaagcctccaaatatttagaagctcag
attccaaaagacccaatatggtcacgtgtacaagaaggacctccagtgtgtcgattatta
aaagagcaaagggggagagctggggaagaagtgagatttcaaactttaagtatccaggtt
tcagatgttgatgacccttcttttgtggacgatcggcaagtatctaactctccacgtgaa
agtgatagcagtggctacgatcaagaatttgtttcatctgtcatgactggagaaaagtat
aacgtaaaatgtgcaaggcacaaacaggttaaaaaaaagcagcacggtattactacaaaa
cccgaaaaaacagtaactgtgccaaaatgttcagagacggatcatgaagtagaaaatgct
gcacaacaattgaaggaatatcatgttaataatgctgagacatctagttccagattgtcc
cagaatgcaggaacagatcaattgacttttgcaccgaaggaaaaagcacctctgtcagtg
gaccaagatgtacttccaacagtttccttgactggattaaaagatgatgagaaagttgta
gcaagcaatgttaccacacaaggtctaagtaagaaaggtgctgcatctctgaaaaagcta
atagcaatatcaaaacaacgtaactctctttgttcaagtagatctacttcacatgtagaa
agtaatgtgattgaattactaagacaaacattaagtgaatggaacacaggagaaacatta
agatttctttatggtacaaatttaaaatacaaaggaacacaatgtaggttgccatgttat
gctactgaacaagaacaacttgatgaagatgacttggatagcctggaagtagttgaaatc
attcatcctaatgaaaatattcacaagagcatccaggtcaaaaagttagatgcctctgtt
agaccattaccaaaatttgaacaactaaagcaggaatctgaatttcttcatctgaaggtc
agagagttttataaaggacgatatgttttacctgacaacaccgaagacaactgtgaagga
aattatcagtccacaacttccgaaagtaatgaggatccatttcttccattagttgattct
gaagcacaacaccatatccgcaaaggtatcgttttagatgcacttaaaaaagttttaccc
aagttattgggaccttgtcaactctcgatgtctgatatattttctcaactaaatagcctt
gtaaaaaccttcagactgaccaacaccaatattattcacagaactccagagtggacatta
attgcagttgtgctgttttcagtgctggatgtaaaggtttcaccccttcaggaatccctg
cagacgctcgcctcagaaccatttgtatctacgattctcaaggaatttcatatccagatt
caagagctagagaacctgaagaatattttcaaatgccatgatagtgatcgaggatga
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