Leucoraja erinaceus (little skate): 129700820
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Entry
129700820 CDS
T09122
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129700820 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leri03400
]
129700820 (rad54l)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
129700820 (rad54l)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
129700820
NCBI-ProteinID:
XP_055497520
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All DBs
Position
10:16166667..16191360
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AA seq
741 aa
AA seq
DB search
MRRSLAPSQLAKRKPGDSSDEEDVKPKRRKLGSERNNTESFISPFRKPLAQLTNRPVCLD
SNQHEAFIKSILAKPFRVPIPNYTGPLGLKSLGIKRAGARRSLHDPYEEGALVLFEPPSL
SAHDQLKADKDKLPVHVVVDPILTSVLRPHQREGVKFMWDCVTGRCITEGYGCIMADEMG
LGKTLQCISLVWTLLRQSPEAKPEIEKVIVVTPSSLVKNWYNEVEKWLAGRVQSLAIDGG
TKAEIDKKLATFMSQRGLRIPTPILIISYETFRLHAEVLCRGPVGLVICDEGHRLKNSDN
QTYQALNKLNAKRRILISGTPIQNDLLEYFSLVHFVNAGILGTVQEFKKRFELPILKGRD
ADANENERLRGEEKLKELISVVNRCLIRRTSNILSKYLPVKIEQIVCCRLTPLQLELYKL
FLKQAKPVLEVEQAHNGKMSFSSLSSITSLKKLCNHPALIYEKCVEGEGGFRGALDLFPP
RYSTKSVEPQLSGKMLILDYILAMTRSTSSDKVVLVSNYTQTLDLFERLCRDRRYLYVRL
DGTMTVKKRAKIVERFNNISNPEFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQA
MARIWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGELKE
LFTLNESTASDTHDRLKCHRCVNGHQVRPPPEDSDCTSDLSRWNHCANKRGLRDAVIQSA
WDAAVSFVFHHHSHEEQRGVL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaagtcttgcaccaagtcagcttgcaaagcgaaagccaggagattcatctgac
gaagaggatgtgaagccaaagagacgaaagcttggatctgagcgcaataatactgaaagt
tttatttctccattccggaaaccactagcacagctaaccaataggccggtctgccttgac
agcaatcagcatgaggctttcattaaaagtatcctggccaaacctttccgagtgcctatt
ccaaactacacggggcctcttggattaaagtcactggggattaaacgtgcaggtgccaga
agatcacttcatgatccatatgaagaaggtgctttggttctctttgaacctccatctctt
agtgcacatgaccaactaaaggctgataaagataaacttccagtacatgtagtggtggat
cctatcttgacttctgttctaagaccacatcaaagagagggtgtgaagtttatgtgggac
tgtgtaacaggccggtgtatcactgaaggctatggctgtataatggcagatgagatggga
ttgggcaagactttgcagtgtatttccttagtatggaccctcttgcgacaaagcccagaa
gctaaaccagagattgagaaagtgattgttgtgactccgtccagtttggtgaaaaactgg
tataacgaggtggaaaagtggctggcaggaagggtacaatcgctggccattgatggagga
accaaggcagagattgacaagaaactggccacatttatgagccaacgtgggttacggatt
ccaactccaatcctaataatttcttatgagacgtttcgattacatgctgaggtgctttgc
agaggtccagttggtttagtcatctgtgatgagggtcataggctaaagaattcagacaat
cagacatatcaggcactgaacaaactgaatgccaagcgtcgcatattgatctctgggact
ccaatccaaaatgacctacttgaatatttcagccttgttcattttgttaatgctggaata
cttgggactgtacaagaatttaaaaagaggtttgagttacccatcttgaagggccgtgat
gcagatgcaaatgaaaatgaaagactgcgtggagaggagaaactgaaagaattgatcagc
gttgtgaataggtgtttgattcgaagaacatcaaatatcctctcgaaatacttgccagtg
aagattgaacagattgtctgctgcagactcactcccctgcagttagagttgtacaaactg
ttcttaaagcaagccaaaccagtattggaagtggagcaagctcacaatgggaagatgagc
ttttcctccctatcttccatcacctcactaaaaaagctttgtaaccacccagcattgatc
tatgagaagtgtgtggaaggtgaaggaggatttcgcggagcacttgatctttttccacca
cgatatagtacaaaatcagtggagcctcaattatcaggcaaaatgcttatccttgactat
atcttggctatgactcgaagtaccagctctgataaggtggttttagtatcaaactacacg
caaactctggatttatttgagaggctctgcagagataggagatacctatatgttagactg
gatggcacaatgacagtaaaaaagagggccaagattgtggaacgtttcaataatatatca
aatcctgaatttgtcttcatgttgagcagtaaagctggcggatgtggcttgaatttaatt
ggtgcaaaccggttggttatgtttgatccagactggaatccagctaatgatgagcaggcg
atggctcgtatatggcgagatggacagaagaagacgtgctacatttacaggcttttgtcg
acaggaacaatcgaggagaagattttccagcgccaaactcacaagaaggcactaagtagc
tgtgtagttgatgaggaacaagatgttgaacggcacttctctcttggagagctcaaggag
ctctttaccctaaatgagagtacagcaagtgatacacatgataggttgaaatgtcatcga
tgtgtgaatggtcaccaggtgcgccctcctcctgaagactcagattgtacatcggatctt
tctcggtggaatcactgtgcaaataaacgtggactgcgagatgcggtcattcaatctgcc
tgggatgctgcagtctcctttgtgtttcatcaccattcccatgaggaacaacgtggagtt
ctctga
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