Leucoraja erinaceus (little skate): 129700821
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Entry
129700821 CDS
T09122
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leri03032
]
129700821 (pif1)
03029 Mitochondrial biogenesis [BR:
leri03029
]
129700821 (pif1)
Enzymes [BR:
leri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129700821 (pif1)
DNA replication proteins [BR:
leri03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
129700821 (pif1)
Mitochondrial biogenesis [BR:
leri03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
129700821 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
UvrD_C_2
DEAD
Herpes_Helicase
Mg_chelatase
AAA_7
PhoH
AAA_5
ABC_tran
RsgA_GTPase
AAA_16
FliG_C
AAA_29
Motif
Other DBs
NCBI-GeneID:
129700821
NCBI-ProteinID:
XP_055497522
LinkDB
All DBs
Position
10:16133627..16162119
Genome browser
AA seq
643 aa
AA seq
DB search
MFPASGVEVQCSVAVEYLNQAGQATKRKNSRNATVTLGRNEFREILLLVHDGKLSQNFVL
REIQLFTRFTRDGKSTIKLIPENIQILISNCPPDKLQILLKTLSIKYAADKKISKPVSDR
TRLVSTLPRIFDTISPVQAQDVERAKLQMQRNLQSPTSTKGSRNQMGNSRPNKQIKRSRT
TSSENCLSAELKPSKKPTLSLPMGRKLSKEQSHVLAMILKGKNVFFTGSAGTGKSFLLKR
IVGALPPKNTYTTASTGVAACHIGGTTLHAFAGIGSGKAPLQQCVELAQRPGILSHWLNC
RHLIIDEISMIEGEFFDKLETVARIVRKCNEPFGGIQLIVCGDFLQLPPVSRAKEKYKFC
FQAKSWSKCMQVNMELKEVRRQTDKTFIAMLQAVRLGRMPLIFIRCPEEVANQLINTASR
KIDRDGILATRLCTHKDDVEFTNEKRLQRLPGEMLTFEAVDSDPMLGEMLNAQCPAGQKL
QLKKGAQVMLTKNLDVQRGMVNGARGVVIGFEPGNKPMPQVRFMCGVTETIKPERWLVKA
LGGNYLTRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRV
MDFDRKVVHANHDVLCFYSRLKKEQMLMQSSLDGYFEMEDQEN
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttccctgcttctggtgtggaggtgcagtgcagtgttgcagtggaatacctcaaccag
gctggtcaagccaccaaacgcaaaaatagccgcaatgccacggtcacacttgggcgcaac
gaatttcgagagattctgctccttgtacacgatgggaagctgtcacaaaattttgtcttg
cgtgaaatccagctttttactcgcttcactcgggatgggaaaagtaccatcaaattgatt
cctgaaaatattcagatccttatttcaaactgcccacctgacaaactgcaaatacttttg
aaaacactatccattaagtatgctgcagataaaaagatcagcaaaccagtcagtgaccga
acacgcctggtctccacacttccacggatctttgatacaattagtcctgtgcaggcccag
gatgtggaaagagcgaaacttcagatgcagaggaatctgcagtcaccaacttctactaaa
ggatcaaggaatcaaatgggtaacagtcgtccaaacaagcagatcaagcgatctcggacc
acctcatcagaaaactgcctgagtgcagagctgaaaccctccaaaaagcccacgttgtca
ctgccaatgggaaggaaactctccaaagaacagtcacatgttctcgccatgatccttaaa
ggaaagaatgtcttcttcactggaagtgctggaactggtaagtctttcttactgaagagg
attgttggagcattgccaccaaagaatacatacaccaccgccagtactggagtggctgcc
tgtcatattggtggaacaaccctgcatgcatttgcaggaattggatcgggaaaagctcct
ctgcagcaatgtgtagagctggctcaaaggcctgggatcctcagccactggctaaattgc
aggcaccttatcatcgatgaaatctccatgatagaaggagaattctttgacaagcttgaa
actgtggccaggattgttcgaaaatgcaatgagccttttggtggaatccagttgatagtt
tgtggagattttctacagcttcctcctgtgagcagggccaaagaaaagtataagttttgc
ttccaggcaaaaagttggagcaagtgtatgcaggtgaacatggaactaaaagaggtgcga
agacaaactgataaaacattcattgcaatgctgcaggcagtacggcttgggagaatgccc
ttaattttcatcaggtgtccagaagaggtggcaaaccaattgatcaacactgcatcgcgg
aagatagatcgagatggaattctagctactcggctttgcacgcataaagatgatgtggaa
ttcactaatgaaaaaaggctccaacgattaccaggggagatgctcacgtttgaagctgtt
gacagcgatcctatgttgggagaaatgttaaacgcacaatgtccggcaggtcaaaagctg
caactgaagaaaggggcacaggtgatgctgaccaaaaacctggatgtacaacgagggatg
gtaaatggtgctcgaggtgtcgtcattggctttgaacctggaaacaaaccaatgccccaa
gtccgttttatgtgtggtgtaacagagacaataaagccagaacggtggttggtgaaagcc
ttgggcggaaactatttgaccagacagcagctgcctctgaagctggcctgggccatctcc
attcacaagagccagggtatgacattggactgtgtggaaatttcactagcacgagtcttt
gaaagtggtcaggcatatgtggctctttctcgtgcacgcagcttggaaggactccgagtg
atggactttgacagaaaagtcgtccatgccaatcatgacgtgttgtgcttttacagcaga
ttaaaaaaagaacagatgctgatgcagtcctcattggatggctattttgaaatggaagat
caagaaaactaa
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