Leucoraja erinaceus (little skate): 129700874
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Entry
129700874 CDS
T09122
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129700874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129700874
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129700874
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
HECT type E3
129700874
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
129700874
NCBI-ProteinID:
XP_055497621
LinkDB
All DBs
Position
1:complement(114879827..114942455)
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AA seq
1051 aa
AA seq
DB search
MASKVQLLCWGHANLGQLGLGEGHENIVVHPRISSFFSSKAVREVACGRYHTAFVLQDGS
VYTCGSNIWGQLGHDKSGYIPEQVTALDAQTIIHTACGEAHTVAINDQGQVFAWGAGKDG
QLGIDSTEEMVRIPRLVRTLSGDIVVQVTCGSWHCLALTKDSRLFSWGQNSHGQLGLGKG
VLSQSSPQCVNSLSGIPLAQITTGGTHSFTLSLSGAVFAWGRNNCGQLGLSDDKDRDVPN
HVKFLRSQKIVYISCGEEHTAALTKSGGVFTFGAGLCGQLGHNFRNNEVNPRRVQELMGS
EVSQISCGRQHTVAFVPSSGLVYAFGRGNRGQLGSGHMVNAQVPYRVAGNWVTHKHKAHP
TDQSSYRVLKQVSCGGDQSFALFFHQENSQVPDDFRCMDPVRRVRIINNSNNKWLLSLSG
KDVLNELNVIFSSPGCLNGSFLNHQNDEHFKTSPRNPGIDLNAIRLFFENMVKSPYCKLL
QQVSVTVENRLLSQLPTSPPDVEAMRAFLILPAFPLFQDSKSYLTFALPFAAAILHLDVN
PSKVLDNWWCWVGASYFGRLVELYKHAVVYLLTRMRTVLLAPVFSHYIKDALEVLEKLHK
VNTIANHVDYDMFYIHELNNLVNIESDYLYWASQHAGVKLQPAIAEVPVAFCTYPFVLNA
QAKTKMLQTDASLQMQVAVNRTSLENIFMMLTLGPFLTTSPFLVLHVQRANLVSDTLREL
SIHSDVDLKKPLKVVFLGEEAVDDGGVTKEFFLLLLKELLDPKYGMFTYYEQSRLLWFSE
KTFVELNWFHLIGILCGLAIYNFTVVDLHFPLVLYKKLLDFPPSLENLKELSPTEGRSLQ
ELLDYPGDDVEDTFCLTFAILRENYGVSELQELVPGGKNLSVKKENRKEFVQAYVNYIFN
TSIQELFAAFSSGFLKVCGGKVLQLFQPSELMAMVVGNTSYNWKELEMSTIYKADYHPAH
PTIKMFWEVFHEFPLEKKKLFLLFLTGSDRIPIYGMSSIRMTIQPTAGGDCYLPVAHTCY
NLLDLPKYQTKAKLCTKLTQAIDHHEGFSLV
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaaagtccagttgctgtgttggggccatgccaatttggggcagcttggtttg
ggcgagggacatgaaaacatagtggtccaccccaggatctcctcgttcttcagcagcaaa
gccgtgcgggaggtggcctgtggacgataccacacggcctttgttctgcaggacggaagc
gtctacacatgtggctccaacatctggggacagctgggccacgacaagtccggatacatc
ccagaacaggttacggcgctggatgcccagacgataatccacaccgcttgtggagaggcc
cacactgtggccatcaatgaccagggccaggtcttcgcttggggagcgggaaaagatggc
cagctcgggattgattccactgaagagatggtcaggataccgaggttggtccggacactg
agtggagacattgtcgtacaggtcacctgtggaagctggcactgtctggctcttaccaaa
gacagtcgcctgttttcctggggccagaactcccatggacagctgggtctggggaagggt
gttctctcccagtccagcccccagtgtgtgaactctctctccggaattcctctggctcag
atcaccacgggtggaacgcacagcttcactctgtcgctctcgggcgctgtgtttgcctgg
ggcaggaacaactgtggtcagcttggactcagcgacgacaaagatcgagatgtccccaat
cacgtgaagttcctgaggagccagaaaatagtgtacattagttgtggcgaagagcacact
gctgcactaaccaagagcggaggcgtgtttacgttcggggctggactgtgcggacaactg
ggccacaacttcagaaacaatgaggtcaacccccgcagggtccaggagctgatgggaagc
gaagtctcccaaataagctgcggcaggcagcacacagttgcttttgttccttcctctgga
ctggtctatgcttttggacgtggcaacagaggtcagctggggtctggacacatggttaac
gctcaggtcccatacagagtggctggaaactgggtaactcacaagcacaaggcacacccc
actgaccagtcgagttaccgcgtgctgaaacaggtctcttgcggaggcgatcagagcttt
gccctcttcttccatcaagagaactcgcaagtccctgatgacttccgctgcatggatcct
gtcaggcgggtcaggatcattaacaacagcaataacaagtggctgctcagcctttcaggg
aaggatgtgctgaatgaattgaacgtgatcttttcttcacctgggtgtttaaatggcagt
tttcttaaccatcagaatgatgagcatttcaaaaccagtcctcggaacccaggcattgac
ttgaatgcaatccgattattttttgagaacatggtgaagtcaccatattgcaagttactc
cagcaggtgtctgtgacggtggagaatcgcctcctctcccagttgccgacttcgcctcct
gacgttgaggcgatgagagccttcttgatattaccagcgtttcctcttttccaagattcc
aagagttatttgacctttgcacttccttttgccgctgccattctccacctggacgtcaac
ccaagcaaagtgttggataactggtggtgttgggtgggtgcgagctactttggccgattg
gtggagctctataaacatgcagttgtgtacctgctgaccagaatgagaaccgtgctgttg
gctcctgtctttagccattacatcaaggatgctcttgaagttttggaaaagctgcacaag
gtgaatacaatcgctaaccatgttgactatgatatgttttacatccatgaactcaacaac
ttggtcaacattgaatctgattatctttactgggcgtcccaacatgctggagtgaaacta
caaccagctattgcagaggtccctgttgctttctgcacctacccctttgttttgaacgcc
caggcaaaaacaaagatgttacagactgatgcttccttacagatgcaggtagctgtgaac
aggaccagtctggagaatatcttcatgatgctcactctggggccattcctcaccaccagt
cccttccttgtcctgcacgttcagcgggccaacctcgtcagcgatacactgagagagctc
agcattcattcagacgtggatttgaaaaagcctttgaaggtggtgttcctgggcgaggaa
gcggtggacgatggaggggtgaccaaggaattcttcctgttgctcctcaaggaactgttg
gatcccaagtacggcatgttcacctactacgagcagtccagactcctgtggttctcggaa
aaaacgttcgtggagttaaactggttccacctgatcgggatcttgtgcggcttggccatt
tacaatttcacagtggtggaccttcacttcccgctggtgctgtacaaaaaactgctggac
ttcccaccttccctggagaacttgaaagagctctcccccacagagggcaggagcttgcaa
gaactgttggattaccctggtgatgatgttgaagataccttctgccttacgtttgcgatt
cttcgagaaaactatggcgtgtcggagctgcaggaattggtccctggcggtaagaaccta
tccgtgaagaaggagaacaggaaggaatttgttcaagcctacgtgaactacatcttcaac
acttccatccaggagctcttcgcggctttctccagcggtttcctaaaggtctgcggaggg
aaggtacttcagctctttcagcccagtgaactgatggccatggtggttggaaacaccagc
tacaactggaaggagctggagatgagtacgatatacaaagctgattaccatcctgcacat
ccgactattaaaatgttttgggaagttttccacgagtttccattggaaaaaaagaagctt
ttcttgttgttcctgaccggcagtgatcgcattcccatttacggcatgtcaagcattcgg
atgaccatacagccgactgctggaggggactgctatctcccagtggctcacacctgctac
aaccttctcgatctccccaagtaccagactaaagcaaaactctgcaccaaactcacccag
gctatagaccaccatgaagggtttagcttggtatga
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