Leucoraja erinacea (little skate): 129700907
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Entry
129700907 CDS
T09122
Symbol
pomgnt1
Name
(RefSeq) protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
KO
K09666
beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.-]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri00515
Mannose type O-glycan biosynthesis
leri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
129700907 (pomgnt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
leri01003
]
129700907 (pomgnt1)
Glycosyltransferases [BR:
leri01003
]
Glycan extension
O-Glycan
129700907 (pomgnt1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GNT-I
ILEI
Motif
Other DBs
NCBI-GeneID:
129700907
NCBI-ProteinID:
XP_055497687
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Position
10:complement(24465462..24513088)
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AA seq
650 aa
AA seq
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MDEWKPNPRAKPFVPRRHRSWFIAWKYRLRGQRSVRRLCQTGALLFLLVTIIVNIKLILG
TRRAANEEELEENYDDAMPNMETARRPSHGRKVLDIEVYSSRSKVYVAVDGTTVLEDEVK
EQSRGIHVIVLNQASGHVMAKRVFDTYSPHEDEAMILFLNMVSRGRILLFTIKDEGSFHL
KDSAKNLLKSLGSQIASSLSWRDMWTFVVKKAGQVYGEKHSKSPALATWGDPVLLKTEVQ
LTSTEDAECHWADTDANRRRKTFCSKVEGYGSICSCKDPAPIEFNPEPLKDNKVYDVPVA
VIAGNRPNYLYRMLRSLLSAQGVNPEKIIVFIDGYYEEPMDVVELFGLKGVQHTPISIKN
ARVSQHYKASLTATFNLHPDAKFTVVLEEDLDISVDFFSFLSQTIHLLEEDESLYCISAW
NDQGYEHTAEDIALLYRVESMPGLGWVLKKSLYKDELEPKWPTPEKLWDWDMWVRMPEQR
KGRECIIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKLNTVPNVQLKNIDSLKKDAYEKEI
HKLLSEAKVLDHTKNPCEDSFIPDTEGKIYLMYIRMDQEADFTTWTQLAKCLHIWDLDVR
GNHKGMWRLFRKKNHLLVVGTPSSPYSAKKPASIIPIYIEPPPKEDVELN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtggaagccgaaccctcgggccaagccgttcgtcccgcggcggcacaggagc
tggttcatcgcctggaagtacaggctgagggggcagcggtcggtcaggaggctgtgccag
actggtgcactcctgtttttacttgtgaccataattgtcaacatcaaacttattttgggt
acaagaagagcagcaaatgaggaagaactagaagaaaactatgatgatgcaatgcctaac
atggaaactgctcgtaggccttcacatggccggaaggttctggacattgaagtatattcc
agcaggtcgaaagtctatgttgctgttgatggaaccacagttcttgaagatgaagtcaaa
gagcagagtcgaggaatacatgttattgttctgaatcaagcttccggccacgtaatggcc
aaacgagtgtttgatacttactcaccccatgaagatgaagctatgatcctgttcttgaat
atggtgtctcgtgggagaatccttctgttcactatcaaggatgagggatctttccatctg
aaagactctgccaaaaatctgcttaaaagcctcggtagtcaaattgcttcatcactcagt
tggcgagacatgtggacttttgtggtaaagaaagcaggtcaagtgtatggtgaaaaacat
tcaaaatctcctgccttggccacttggggtgatccagttttattgaagaccgaagttcag
ctaacctcaactgaagatgccgagtgccattgggcagacacggatgccaatcggaggagg
aagacgttttgcagcaaggtggaaggatatgggagcatctgcagctgtaaggatccagca
cctattgaatttaaccccgaacctttaaaggataacaaagtttatgatgtcccagtggca
gtgatagcaggtaacaggcctaactacctttacaggatgttgcgttcattactgtctgca
caaggtgtaaatccagagaagatcattgtcttcattgatggttactatgaggagccgatg
gatgtggtggaactctttggcctgaaaggtgttcagcacactcctattagcattaaaaat
gctcgtgtctcacagcactacaaagccagtttgacagctacattcaatttgcacccggat
gcaaagtttaccgtggtacttgaggaagacttggatatctcggtggactttttcagtttt
ctcagccaaacaatccatttacttgaagaggatgaaagtttatattgcatatctgcttgg
aatgatcagggttatgagcacacagcagaggacattgctctgctctatcgagtggaaagt
atgccagggcttggctgggttctaaagaagagcctttataaagatgaactggagccaaag
tggccaacacccgaaaagctctgggactgggacatgtgggtgagaatgcctgagcaaaga
aaaggtcgggagtgtattatcccagatgtgtccagatcttaccactttggcattgttgga
ctcaatatgaatggctattttcatgaagcctatttcaagaaacacaagctcaacacagtt
ccaaatgtgcagcttaaaaatatagatagtttgaaaaaggatgcttacgagaaagaaatt
cacaaactgctaagtgaggccaaggttctagaccataccaaaaacccttgtgaagatagt
ttcattccagacactgaaggaaaaatctatctcatgtatattcgaatggaccaggaagct
gattttacaacatggacacagttagcaaagtgcctgcacatctgggacctagatgtccga
ggtaaccacaagggcatgtggcggctattcagaaagaagaaccacttgcttgttgtgggt
acaccttcctctccttattcggcaaagaaaccagcatcaattatcccaatatatattgaa
ccacctccaaaggaagatgtggaattgaattaa
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