Leucoraja erinaceus (little skate): 129700967
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Entry
129700967 CDS
T09122
Symbol
patj
Name
(RefSeq) inaD-like protein isoform X1
KO
K06092
InaD-like protein
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129700967 (patj)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
Motif
Other DBs
NCBI-GeneID:
129700967
NCBI-ProteinID:
XP_055497804
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All DBs
Position
10:complement(28938678..29154461)
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AA seq
2025 aa
AA seq
DB search
MATRRRGRRLHGRTISCLRFFEIEQTIEDIIMPENPLTVDKQQVLQALARLQARLRERGD
SSQNEKLGIFRDTIESPLFNQIITLQHSIKQLKEQLNCMSTNASPNFDFSQEGLLVLNAE
QSMNNAVVAEDAKLFPDIPFHGQSGLLQTSEKTKEEFDNVMQILAQGRQVEHIELSKPTT
GSLGFSVVGLKNDNMDELGIFIREIQKGSIAERDGRLQENDQILALNHTPLDENVSHQEA
ISMLQQTKGSVHLVVAKGFLNGAYTKPVDMATLPFASESTQWGPMEEIELVSDGSGLGFG
IVGAKPTGVIVKTVVPGGLADQDGRLRTGDHILQIGGTDVQGMGSEQIAQVLRNCGNRVR
MVVARDLGDDYSSKSSMVIPSLLSQEKSNIVSADDYEINNIELKRDGQSLGITVVGYVGA
SQSDTSGIFVKSIIPGSAAEQSGCIHVQDRIIAVDGVNIQGFTNQEAIDALRNTEKTVNL
TLARKKMCNNYEYFGKVERDNVTQVTNALITEGSFYSPVEGPETAHAKKQECKIDGTRPA
SKNDELKNKWEDLLGTEYEVMVLNVDSEIYSDVDVQKYSKLLPVHTLNLGVELDSFDGRH
YISSILPDGPIGQNGLLQVEDEILEVNGKQLYGKSRREAILFLKDMSPPFNLVCCRRLVE
EENEMPVDEPTGMESDVSQASEKYEMIRPPSPWSSENCSHQVDVDTETNAEEDEVGELAL
WTSDARVIELHKGSEGLGFSILDYLDPLDPTRTVIVIRSLVVGGVAECDGRVLPGDRLVF
VNDQNLENTSLAEAVQALKDTPYGKVRLGICKPMVTEANENHISDFTRSNSTRENIQHDS
DMLNLAYSTNLPVPHEFDDVSFSQEELVDEPEVDLKFLNLHPSKVDKAADFLSSETLTRN
QWTQSNEQQEMLVDDENKVIPVIGEMVNRQQGIKDKLEYYEPSDLTTTNDQFRNTPPLFQ
YNANENEETFNGSSLTSSTNGSTNVQEMVPEDFERTVTIMRNGHDLGLSIKSDNRGPGAI
IKSVESEGAAGRNGQLQKGDYIVALNVEPTTGLNSTQKQLFFAKQATNEELMITYIPAKD
VDRYKRSLASKQTKSSNAVELAAESRMKDTASELPEREEGEGEETPILSHWEAPRRVELW
RVPGESLGISIVGGNTVIKRLKNGEELRGIFIKHVLEESPAGRSNALKTGDKIIEVSGID
LQNATHDEAVDAIKNVGNPIIFVVQSLLPTPRPYSVYQSRPEQKQEQKQEKEKKITPGSI
RGGPPPPMRLPPPYKEPTSEKLSVLDEKEEFLDTGRIPKEENESDQKIRLKYGDLPGDLH
IIELDKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAGKDGRVKIGDELLEINSQILYGR
SHQNASAIIKNAPINVKIVLIRNDDAVNQMAVTPHPLPTSFPCPEILDTTGTLPSLEQTS
TQPDFSNFKNVHDILLTKDQSGLGLAISEDNTDKGVIIKSLTDNGAAIKDGRIQVGDRIL
AVDDESVVAQPPEKAINLLKKVKGAVKLTISFQDRSLQPSPLPPLIYLNSDSELSDHTNI
SVPAVVPDPATCPIVPGQETILEISKGSSGLGLSIVGGRDTLLDAIVIHEVYEEGAAAKD
NRLWAGDQVLEVNGIDLRNATHEEAITALRQTPQKVRLTVFRDEAQYKDEENLDIFFVDL
QKKVGRGLGLSIVGKRIGTGVFISDIVKGGAAELDGRLMQGDQILSVNGEDMRNASQETV
ATILKCAQGLVQLEVGRLKAGSWISSSSTSHGSQMSQESGASNLSSFGAAVTTSQNIASI
KKNTADSSQRNSGSDTGLRTVEITRGPNDALGISIAGGKGSPLGDVAIFIAMIQASGMAA
RTHRLKVGDRIVSINGQPLDGLSHAEAVNLLKNAYGSIILQVVADTNITAIASQLENMTT
NSNLSTPSDVRVEDTEPPQCTMITLEKGPDGLGFSIVGGHGSPHGDLPIYVKTVFAKGAA
TDDNRLKRGDQILAVNGESLEGVTHEQAVDILKRQKGTVTLTVLS
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacgccgccgggggaggcgactccatggccgcacgatttcctgtctcagattc
tttgaaatagagcaaacaattgaagatataatcatgccagaaaatccgttaacagttgat
aaacagcaggtattgcaggcactggctcgcttgcaggcacgattacgtgagagaggagat
tcgtctcaaaatgagaagctaggtattttccgtgatacaattgaaagccccttattcaat
caaataataacccttcagcattccatcaaacaactaaaggaacagctgaactgcatgtcc
acaaatgcatctcccaattttgacttttcacaagagggactcttggtcttaaatgcagaa
cagtctatgaacaatgcagttgtggcagaagatgcaaaactctttccagatattccattt
catggccagtcaggattattgcagacatctgaaaaaacaaaagaggagtttgataatgtt
atgcaaattttagctcagggtcggcaagtagaacatattgaattgagcaagccaacaact
ggaagcctaggattcagtgtggttggccttaaaaacgataatatggatgaacttggcatt
tttatacgggaaatacagaaaggaagcatagcagagagggatggcaggttacaagaaaat
gatcagattttggccttgaatcatacaccattagatgagaacgtttctcaccaagaagct
atttcaatgctccagcagaccaaaggatcagtgcatttggtagttgccaaaggattccta
aacggggcatataccaaaccagtggacatggcaaccttaccttttgcttcagaatcaaca
cagtggggacctatggaagaaattgaattggtcagtgatggatcaggcttaggatttgga
attgtaggagcaaagccgactggagtaattgtgaaaaccgtcgtccctggaggattagct
gatcaggatggacggcttaggactggcgatcatatactccagattggaggcactgacgtc
cagggaatgggaagtgaacagattgcacaggtgttgagaaactgtggtaatcgagtgcga
atggtggtggccagagatcttggtgatgattattcctctaaatcttcaatggttattcct
tctttattaagtcaggaaaaatccaatatcgtttctgcagatgattacgaaattaataat
attgaactcaagagagatggacaaagcctgggcattacggttgttggttatgttggagca
tctcaaagtgatacctctggaatttttgtgaaaagcataataccagggagtgctgcagaa
caaagtggatgtattcacgttcaagacagaatcattgctgttgatggagttaatattcag
ggatttactaatcaagaagcaattgatgctttacgaaacactgaaaaaactgttaacctt
acattagcaaggaagaagatgtgcaataactacgaatactttggaaaggtagaacgtgat
aatgtaacacaggtgacaaatgcacttatcactgaaggcagtttttattctccagttgaa
gggccagaaactgcacacgcaaagaagcaggaatgcaaaattgatggcacaagacctgct
tcaaaaaatgatgaattaaagaacaaatgggaagatttgttggggacagagtatgaagtg
atggtgcttaatgtggactctgagatttacagtgatgtagatgtgcagaaatattcaaag
ttattaccagttcatacattgaatcttggagtggagctggattcatttgatggacgtcat
tacatatcatcaattttgcctgatggaccaataggccaaaatggattattacaagtggaa
gatgaaattttagaggtgaacggaaagcagctatatggaaaatcgcgccgtgaagcaatt
ttatttctgaaagatatgtcccctccgtttaatttggtctgttgtcggagactggtcgag
gaagaaaatgagatgcctgtcgatgaacccactggcatggaaagtgatgtttcccaggct
tcagaaaagtacgagatgataaggccaccatctccctggagtagtgaaaattgtagccac
caggtggatgtggatactgagactaatgcggaagaggatgaagttggggagctggctctt
tggacttcagacgcgagagtgattgaactgcataaaggttctgaaggtttaggtttcagc
atcttggactatctggatcccttagatcccacacgcactgttattgttattcgctctttg
gtggttggtggggttgctgaatgtgatggcagagtgctacccggggatcggctcgtcttt
gttaatgaccaaaatctagagaatacctctttggcggaagctgttcaggctttgaaagac
actccgtatggcaaggtccgccttggcatctgcaaaccaatggtgaccgaagcaaatgaa
aatcacatttcagacttcacccgctcaaattctactagagaaaatatccagcatgattca
gacatgttgaatttagcttattccacaaacctgcctgtgccccatgaatttgacgatgtt
tcattttctcaagaagaactagttgatgaacctgaggtggatttaaagttcttgaattta
caccccagtaaggttgacaaagcagctgattttttgtcatctgagacattaacaagaaat
caatggacccagagtaatgaacagcaggaaatgttggtggatgatgagaacaaggtgatt
cctgtaataggtgaaatggttaatcggcagcagggtataaaggataaattggaatattat
gaaccttcggacctaactacaactaatgatcaatttcgtaatactccacctttatttcaa
tataatgcaaatgagaatgaagaaacgtttaatggaagttcactaacttcgtctacaaat
gggtcaaccaatgtccaagagatggtgccagaagattttgagagaactgtcaccataatg
agaaatgggcatgatctaggattgagcataaaaagtgataacagaggacctggggcgatc
atcaaaagcgttgaaagtgaaggtgctgctggaagaaacggacaactccaaaagggagat
tatattgttgcattgaacgtggagcccacaactggtctaaattcaactcagaagcaatta
ttttttgccaagcaagccacaaatgaggaacttatgattacttatataccagcaaaagat
gtggatcgctataagagaagtttagcttcaaagcaaacaaaatctagcaatgctgtagaa
ttggcagcagaatccaggatgaaagatactgcaagtgaattgcctgaaagagaagaaggt
gaaggggaagaaacaccaatattgagtcactgggaggcaccacggagagttgaactttgg
cgagtaccaggtgaatcgcttggcatcagtattgtaggtgggaacacagtaataaaaagg
ctaaaaaatggtgaagaattaagaggaatttttattaaacatgtcttggaggagagtcca
gccggaagatccaatgctttgaagacaggagacaaaattattgaggtttctggcattgac
ctgcaaaatgccacacatgatgaggcagtggatgccataaaaaacgttggaaatccaata
atttttgtggttcaaagtttattgcctactccacgaccatattctgtatatcaaagcaga
cctgaacaaaaacaagaacaaaaacaagaaaaagaaaagaaaataacaccgggctctatt
agaggtggcccaccaccacccatgcgactgcctccaccttacaaagagcctacaagtgag
aaattgtcagtactggatgagaaagaagaattcctagatactggcaggattccaaaggaa
gaaaatgagagtgaccaaaagatcaggctaaaatatggagatctgccaggagatctacac
atcatcgagcttgataaagacaagaatggtttgggactcagtcttgctggcaacaaggac
aggtctcgtatgagtatctttgtagttggcattaatcccgaaggtcctgcaggcaaagac
gggagagtaaagattggagatgaacttttggaaatcaatagccagatactttatgggaga
agccatcaaaatgcatcagcaataataaagaacgctccaataaatgtcaagattgttttg
ataaggaatgacgatgctgttaatcaaatggcagttacccctcatcctctacccaccagt
ttcccttgtcctgagattctagataccaccggaacattgccctccctggaacagacatcc
actcagccagatttttcaaatttcaagaatgtacatgatatactattgacaaaggaccag
agtggtcttggtctagctatcagtgaagacaacacagacaaaggtgttattattaaaagc
ttgactgacaatggagcagcaataaaggatggaagaattcaagtaggagacagaattctg
gctgtggatgacgagagtgtagtggcacaacctccagaaaaggctatcaaccttctcaaa
aaagtgaaaggagcagtaaagttaacaatcagttttcaggacaggtccctgcaaccatct
ccccttccaccacttatataccttaactcagattctgaactctcagatcacactaatata
tctgtgcctgctgtggtgccagatccagcaacctgtcctatagtccctggccaagaaacc
atcctggaaatttcaaaggggagttctgggcttggactcagcatcgtaggtggaagggat
acattgctggatgcaatagttattcatgaagtgtacgaagagggtgcagcagctaaagat
aacaggctctgggctggagaccaagtcttggaggtaaatggaattgatttaaggaatgca
acgcatgaagaagcaatcacagccttgagacagacaccacagaaggtgcgactcaccgtg
ttcagagatgaagcacagtacaaagatgaggagaatttagatatattttttgtggatctt
cagaagaaagttggaagaggattgggcctgagcattgtaggaaaacggattggaactgga
gtatttatctcagacattgttaaaggcggggctgctgaactcgatgggcggctgatgcaa
ggtgaccagatcttgtcagtaaatggagaggatatgcgaaatgcttcacaggagactgtg
gcaacaatactaaagtgtgctcaaggattagttcagttggaagttggccgtctgaaggca
ggctcatggatttcctccagcagtacatcacacggcagtcagatgagccaagaaagtggc
gcaagtaatctgtctagctttggagctgctgtgaccacttcacaaaacattgccagcatc
aagaagaatacagctgactcctcacagaggaactcgggttcagatacaggattgagaact
gtggaaataacaaggggaccaaatgatgcacttggaattagcattgctggtggcaagggg
agccctctaggtgatgtggccatcttcatcgccatgatccaagccagtggaatggctgca
cgcacacacaggctaaaggttggggatcggattgtcagcattaatggccagcccctggat
ggactgtctcatgcagaagcagttaatctattgaagaatgcctacggaagcattatcctt
caggttgtagctgacacaaatattactgctattgcaagccagcttgaaaatatgacaact
aactccaacttgagtacaccatctgacgttcgagtggaagacacagaaccaccacagtgc
acaatgataactttagagaaaggaccagatggactgggattcagtattgttggaggacat
ggaagcccccatggagatctgccaatctacgttaaaacagtgtttgccaagggagcagcg
acagatgacaacaggttaaagcgaggagatcaaattctagcagtaaatggggaaagtttg
gaaggtgtcacacatgaacaggctgtcgatattctgaaacggcaaaaaggaactgtaacg
ttaacagtgttgtcgtga
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integrated database retrieval system
