Leucoraja erinaceus (little skate): 129701053
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Entry
129701053 CDS
T09122
Name
(RefSeq) neurogenic locus notch homolog protein 2-like isoform X1
KO
K20994
Notch 2
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129701053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Notch
NOD
NODP
Ank
Ank_5
EGF_3
Ank_4
Ank_3
JAG1-like_EGF2
EGF_DL_JAG
EGF_Teneurin
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
129701053
NCBI-ProteinID:
XP_055497974
LinkDB
All DBs
Position
10:complement(39552091..39699712)
Genome browser
AA seq
2477 aa
AA seq
DB search
MGASRLWRHFWGVLVVVAAVCAAFQCHDSPQPCVNGGTCLTRQNGIGGCRCRSGFVGERC
QHPDPCQILTCLNGGTCRISIAEGKAQGSCSCALGFTGDRCATIVTNVCRKNPCQNRGTC
QLITLDKYECACQQGWIGKNCQHVDSCASQPCANGGKCSSSRNNYTCTCASGYTGSRCRT
DIDECKVKDRCLNGGICNNEPGSYRCLCEPGFTGSNCESVYVPCSPSPCVNGGTCRPTSD
DLAYECNCLPGFSGKDCEANIDDCPEHECQNGGICVDGVNTYNCRCTPEWTGQFCTEDVD
ECQLQPNACQNGGTCFNINGGYHCVCVNGWSGDDCSENIDDCAGATCMHGATCHDRVASF
VCECPIGKAGIFCQVDDACVSNPCHEGATCETNPLKSSFFCSCPLGYRGTVCDEDINECS
LGGNPCEHGGKCVNTKGSFRCECAVGYTGPRCEMDINECLTSPCQNDATCLDQIGEFKCI
CMPGFVGVYCETNIDECESQPCLNNGVCKDEVNRFACKCPPGFAGNMCHIDIDECASTPC
QHGAKCIDRPNAFECECSEGFMGTMCEINEDDCSPDPCHYGMCKDGIAGYTCICDSGYKG
LICSEQIDECQSQPCQNGGTCQDRVNEYKCRCPVGTSGVNCEINYDDCASNPCDYGSCQD
GINRYDCVCSPGYTGPMCNVDIDECASNPCHNGGTCVDKINQFVCHCPEGYHDPHCISEV
DECKSSPCIHGRCVDDVNSYQCKCDAGWAGVNCDVDKDECESNPCQQGGTCENLVNGYKC
TCVKGFKGFDCQININECASNPCLNKGACVDEVNSYHCVCSLPYTGKDCESILAPCSSHP
CENGGVCSETEDYENYVCTCTVGWQGRRCSVDIDECVADPCKNSAACQNIPGSYQCHCLP
GYTGVNCKTNANDCSPNPCQNGGACIDGVNTFLCNCLLGFTGDKCQQEINECFSNPCLNG
GNCSDYVNSYVCKCPQGFNGIHCENNMPDCTESSCFNDGTCVDSINSYICHCQPGFTGAN
CQFDINECDSKPCKNGGTCIDGLGSYRCTCPSGYSGNNCQTLVNLCSGSPCKNRGKCMQR
GATYRCLCQSGWTGLYCDVPDVSCEVAALHRGLTVPQLCQHSGICINTGNSHRCQCMAGY
TGSYCQQDVDDCASNPCHNGGTCRDYPGSYACECVPGYKGLSCEYEVNECRLSRCQNGGT
CIDLVNEYKCSCPPGTAGILCEINNDDCEPDFDPRTAQYKCLNGGQCIDKIGGYSCICPP
GFSGERCEGDVNECRPNPCDHKGMLDCVQLNNDYLCRCRPDFTGRHCETVIDLCLSQPCR
NGGTCMFAVNTPLGYTCQCRPGVMGSSCEYTNYTCGQVLCRNGGSCSMTRQGPKCTCLKG
FGGSECQLPTCAARSCHNGGTCLPTSSPPFFSCRCPSPYRGLTCAQLERQSCHLSQCKKK
AGDRVCDKECNSHECEWDGGDCSLNLKPWENCTESLQCWKFFNNNQCDETCNTPECLFDN
FACRYSHKSCNPLYEKYCADHYRDGRCDQGCNTEECGWDGLDCVEGAPEKLAEGVLVLIV
LLPPEELLKDSVNFLRKLGSLLHTTLRFKLDSNGAPMIKPYYGHGSRMKRFIRIVRELGQ
EVIGSEVYLEIDNRQCLQTSEDCFPSTDTAAAFIAAQSSEGNLPYPIESVKSQRDEPSSP
GQLSLLYLLMVAMGIIILILILGVVAAKHKRKLGPLWFPEGFTLKKVGNRKRREPVGQDA
VGMKNLSRQVPDVTIGDDSQNEQWMEEGGPDAKKVKTEDQALLSENKDQVDHRPWTQQHL
VAADVRLTPSLALTPPQGEQDAHCMDVNVRGPDGFTPLMLASLRGGGLDTGIELEEEAED
SSANAITDLIYQGASLHSQTDRTGETSLHLAARYARADAAKCLLDAGADANAQDNMGRSP
LHAAVAADAQGVFQILIRNRATDLDCRMNDGTTPLILAARLAVEGMVVEQINCHVDVNAV
DDHGKSALHWAAAVNNVDATRALLKNGANKDMQDNKEETALFLAAREGSFEATKILLDHY
SNRDITDHMDRLPRDIAHERMHHDIVQLLDEYNLVRSPQGMGGPMMGPTMSPATCLTGCS
SLKLTPMGKKARKPSTKSLAPGSAKDSKEAKARRRKRSIGSGKETLVESSVALSPVESLE
SPHTFLSTTSPPLLNSGVHQQTPVASLHPSISLQGQLAMSFSNLSEMKGINVGSNSVLGQ
VLPSMSHPSIAGQSSNLGLSLGRVGHMNMQQDWMNRMGIGTSQYSPLLGILHQVSSSYPT
IHQQNGVLQPNVPAMHMTMVREQLPQLLAYQSMNSGTSQPARQQNSQVTQQQGQTYCSSM
TPVPVGNMHQMSDIIRLPNGQMNNSMLPASQEAQASQATLPAYHKLPSSVQIDKFPTPPS
QHSYVSATDNTPNHNIHLQSEHPYLTPSPESPDQWSSSSPHSTSDWSDITPSPAPIGQRQ
LVSHMPEQQRSNMQVFA
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgggagccagccggctttggaggcacttttggggtgtgctggtggtggtggctgctgtc
tgtgcagcattccagtgccatgactcgcctcaaccctgcgtgaatggaggaacttgctta
actcgccaaaatggtataggaggttgtcggtgtcgatctggatttgtaggtgaacgctgc
cagcacccagatccctgtcagattttaacctgccttaacggagggacttgtagaatttcc
atcgctgaaggcaaagcacaaggatcatgcagttgtgctctggggttcactggcgatcgg
tgtgcgacgatagtgaccaatgtctgcaggaaaaatccctgccaaaaccgaggaacctgc
caactcatcacccttgacaagtatgaatgtgcctgccaacaagggtggataggtaaaaac
tgccagcatgtggattcctgcgcctcgcagccatgtgctaacgggggcaagtgcagcagt
tcaaggaacaactacacctgcacctgtgcttccggctacactgggtctcgctgcaggacc
gacatcgacgaatgcaaggtcaaggatcggtgtctgaatggagggatctgcaacaacgaa
cctggctcataccgctgcctatgcgagccgggcttcactggatccaactgtgagagcgtt
tacgtcccctgctcgccatcgccctgcgttaacggaggcacctgccggccaaccagtgat
gacctggcctacgaatgcaactgcctgccaggattcagtggaaaagactgtgaggcaaac
attgacgactgccctgaacatgaatgtcagaatggaggcatctgtgtggatggagtgaac
acctacaactgccgatgcacacctgagtggacaggtcagttttgtacagaagatgtggat
gagtgtcaattgcagccaaatgcctgtcagaatggagggacctgcttcaacatcaacgga
ggctatcactgcgtctgtgtcaatggctggagtggagacgactgtagtgagaacatagat
gattgtgccggtgcaacctgcatgcatggagctacctgccacgaccgagttgcatccttt
gtatgtgaatgtcctattggcaaagctggtatattctgtcaggtagacgacgcgtgcgtt
agcaacccttgtcatgaaggagccacatgtgaaaccaaccctctcaagagcagcttcttt
tgtagttgcccccttggttacagagggactgtctgtgatgaggacatcaatgaatgttcc
ctagggggaaatccctgcgaacatggagggaagtgtgtaaacaccaagggttccttccgc
tgtgaatgcgctgtgggctacacgggaccacgctgtgaaatggacatcaacgagtgcctt
actagtccctgccagaacgatgccacctgtttggatcagatcggtgaattcaagtgcatt
tgtatgccaggcttcgtgggagtatactgcgaaacaaatattgatgagtgtgaaagccag
ccatgcctcaacaatggtgtgtgcaaggacgaggtgaacagatttgcttgcaagtgccca
cctggtttcgctggaaatatgtgccacatcgacattgatgaatgtgccagcaccccatgc
cagcacggagccaaatgtattgatcggccaaatgcttttgagtgcgagtgcagtgaaggg
ttcatggggactatgtgtgagattaacgaagacgactgcagtccagacccctgccactat
gggatgtgcaaggatgggatcgccggctacacctgcatctgcgattctggttacaagggg
ctgatctgcagcgagcagatcgacgagtgtcagagtcaaccctgtcagaacggaggcacc
tgccaagaccgtgtgaatgaatacaagtgtcgatgcccagttggcacctctggtgttaat
tgtgagattaactatgatgactgtgccagcaacccatgtgactatggaagctgtcaagat
ggtattaatcgctatgattgcgtctgcagtcccggatatacaggacccatgtgcaatgtt
gacatagatgagtgtgcctccaacccatgtcataatggaggtacatgtgtcgataaaata
aaccaatttgtttgtcactgccctgaaggatatcatgatccccattgtatatcggaggtg
gacgagtgcaagagcagtccctgtattcatggacgatgtgtagatgacgtcaacagttac
caatgcaaatgtgatgctggctgggctggagtaaactgtgatgtggacaaagatgagtgc
gagtcaaatccctgtcagcagggtggaacttgtgagaacctcgtcaatggttacaagtgc
acgtgtgtgaaagggttcaaaggttttgactgccaaatcaacataaatgaatgtgcatcc
aatccctgcctaaataaaggagcctgcgtggatgaagtgaacagctaccactgcgtgtgc
tctctcccgtatactggcaaagattgcgagtccattctcgccccatgctcctcccatcca
tgtgaaaatggcggtgtatgcagtgaaaccgaagactatgagaattatgtgtgcacatgc
acagtgggttggcaaggtcggagatgttcggtggatattgacgagtgtgttgctgatccc
tgcaaaaatagtgctgcttgtcaaaatattcctgggagctaccagtgtcattgcctccct
ggctacacgggagtgaactgtaagacaaacgcaaatgactgtagccccaatccatgccag
aatgggggcgcctgtattgatggtgttaacacgttcttgtgcaactgtttgttgggattc
actggtgacaagtgccagcaagagataaacgagtgcttcagtaacccttgtctgaacggc
gggaactgctccgattatgtcaacagttatgtctgcaagtgcccgcaaggtttcaatggg
attcactgtgaaaacaacatgcccgactgcacagagagctcttgcttcaacgatggtacc
tgtgtcgacagcatcaactcgtacatttgccattgccagcctggcttcactggtgccaat
tgccagttcgacatcaatgagtgtgactccaaaccgtgtaagaacggtggcacctgcatc
gatgggctgggcagttaccgctgcacctgtccctctggctactcgggcaacaactgtcag
accctggtaaacctgtgtagtggctcgccctgcaagaacagaggcaagtgcatgcagcga
ggtgccacataccgctgcctctgccagagtggctggaccggcctgtactgtgacgtacca
gatgtgtcgtgtgaggtggcagctctccatagaggcttgactgtgccgcaactttgtcaa
cattcggggatttgcatcaacactggcaacagtcatcgatgccaatgcatggctggatac
acaggcagctattgccagcaggatgtggatgactgtgcgtcaaacccatgccacaatggt
ggcacctgcagggattacccgggcagctacgcttgcgagtgtgttccaggctacaaggga
ctcagctgtgaatatgaggtgaatgaatgccgactctcgcgctgtcagaatggagggact
tgcatcgacctggtgaatgaatacaagtgttcctgtcccccagggactgcaggaattctg
tgtgaaataaacaacgatgattgtgaacctgattttgatccccggactgctcagtataag
tgtttaaatggcggccagtgtatcgacaaaattgggggctacagctgcatttgtccgcct
ggttttagtggcgaacgctgtgaaggggatgtcaatgaatgtcggccaaatccatgtgat
cacaagggtatgcttgactgcgtacagttaaacaacgattacctgtgtaggtgtcgacct
gactttactggccgccactgtgagactgtcattgacctgtgcctttctcagccatgccgg
aatggagggacgtgcatgttcgctgttaacactcctctgggatacacctgccagtgcaga
cctggtgtgatgggctcgagttgtgaatacaccaactacacgtgcggccaggtcttgtgc
cggaatggcgggtcttgttccatgacccgccagggccccaagtgcacgtgtttgaagggg
ttcggaggctccgagtgccaactgcccacttgtgctgccagatcgtgccacaacggcggc
acctgcctgcccacatcctcgccgccgttcttcagctgccgctgtccctccccgtaccgc
ggtctgacctgcgcccagctggagcggcagagctgccacttgtcgcagtgcaagaagaag
gccggggaccgtgtctgcgacaaggaatgcaacagccacgagtgcgagtgggatggcggc
gactgctcgcttaacttgaaaccctgggagaactgcacggagagcctgcagtgctggaag
ttcttcaacaacaatcagtgtgacgaaacctgtaacacacccgaatgcctgttcgacaac
ttcgcctgtcgctacagtcacaagtcctgcaacccgttgtacgagaagtactgtgctgat
cattaccgcgatggccggtgtgaccaaggctgcaatactgaggaatgtggctgggatggg
ctggattgcgtggaaggtgcccctgagaagctggccgagggggtgctggtgttgatagtg
ctcctgcccccagaggaactcctcaaggattctgtcaacttccttcggaagctggggtcc
ctcctgcataccaccctccggttcaaattggactccaacggggcaccaatgatcaagcct
tactacggccatgggtctagaatgaagcgtttcattaggatagtgagagagctcggacaa
gaagttattggttctgaagtctacttggagattgacaataggcagtgcttgcaaacatct
gaggattgttttccatcgacggacaccgccgctgctttcatcgctgcccagtccagcgag
ggcaatctgccgtatccaatcgagtctgttaaaagtcaacgtgatgaaccgagcagcccg
ggccagctcagtctcctatacctgttgatggttgcaatgggtatcatcatcctcattctc
atcctgggtgttgtagcagccaagcacaagcgcaaactgggcccgctctggttccccgag
ggctttacgctgaagaaggtcggcaatcggaagcggcgagaacctgttgggcaggatgca
gtgggaatgaagaatctatcaaggcaagtgcctgatgtcaccattggtgatgacagccag
aatgagcagtggatggaggaaggcgggccagacgcaaagaaagtgaagactgaagatcaa
gctctgctctcggagaataaagaccaggttgaccatcggccatggacacagcagcatctt
gtggctgccgatgtccgtttaacaccatccctggccctgacaccaccccaaggagaacag
gatgcccactgcatggacgttaatgtgagaggtccagatggctttacacctcttatgttg
gcctcgctgcggggtggtggtctggacactggaatcgagttggaggaagaagctgaggac
tcgtcggccaatgccatcactgacctcatctatcagggtgccagcctccattcccagact
gaccggaccggggagacatcactccacctggcagcacgctatgctcgggcagatgcggcc
aagtgcctccttgatgcaggagcagatgccaatgcccaggacaacatgggtcggtcacct
ctccatgcggccgttgcagcggatgctcaaggggtgtttcagattcttattcggaacaga
gccacggacctggattgccgaatgaacgacgggaccactcctctgatcctcgctgcacgc
cttgctgttgagggcatggtggttgagcagattaattgccatgtcgatgttaatgctgtg
gatgatcatggtaaatcggcacttcactgggcagcagctgttaacaatgtggatgcaacc
cgggccctgctgaagaatggagcaaacaaggacatgcaggacaataaggaggagacagcc
ttgtttcttgctgcacgggaaggcagcttcgaggccaccaagattctactggaccactat
tccaaccgtgatatcaccgaccacatggacagactcccccgcgacatcgctcatgagcga
atgcaccatgacattgtgcagctgttggatgagtacaacctggtccgtagtccgcagggc
atggggggacccatgatgggacccaccatgtcccccgccacctgcctgacaggttgctcc
agcctcaagctaacccccatgggcaagaaggcacgaaaacccagcacaaagagcctggct
ccaggcagtgctaaagactccaaggaggcaaaagccaggcggcggaaaagatccatcggc
agtggtaaagagacccttgtggagagctcagtggctttgtcgccggtcgaatcactagaa
tctccacacaccttcttgtccaccacatctccacctctactaaattcaggggtgcaccag
caaacaccagtagcatctctgcacccttccatttcactacagggtcaactggcaatgtcc
ttctcaaacctcagtgaaatgaaaggtatcaacgtgggctccaactcggtcctgggtcaa
gtcctcccctccatgtcgcatccttccattgctgggcaaagctccaacttgggtttgtct
ttgggccgggtcggtcacatgaacatgcaacaagactggatgaatcgaatgggaatcggc
acctcccagtacagtccactgctgggtatcctgcaccaggtctccagttcataccccaca
atccatcaacagaacggtgtgctgcagccaaacgtgcctgccatgcacatgaccatggtc
agggagcagctgccccagctgctggcataccagtcgatgaatagtggcacgtcgcaacca
gcaaggcagcagaactcgcaagtaacacagcagcaagggcaaacttactgcagctccatg
acaccagtccccgttggcaacatgcaccaaatgtcggacatcatccggctgccaaatggt
caaatgaacaactccatgctgcccgcgagccaagaggctcaggcctcacaagccaccctg
ccagcttatcacaagctaccgagttcagtgcagatcgacaagttccccacccctccatct
cagcacagctatgtctcggcgacggataataccccgaaccacaacatccacctccagagt
gagcacccgtacttaacgccctcccctgagtcgcccgatcagtggtccagctcctctccg
cattctacgtccgactggtcagacattacgcccagcccagccccgatcgggcaacgccag
ctcgtctcgcacatgccagagcagcaaaggagcaacatgcaagtgtttgcctga
DBGET
integrated database retrieval system
