Leucoraja erinaceus (little skate): 129701081
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Entry
129701081 CDS
T09122
Name
(RefSeq) probable voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04010
MAPK signaling pathway
leri04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129701081
04020 Calcium signaling pathway
129701081
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129701081
Ion channels [BR:
leri04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129701081
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
129701081
NCBI-ProteinID:
XP_055498015
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All DBs
Position
10:complement(42173631..42315723)
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AA seq
1730 aa
AA seq
DB search
MLRISIRHMVKSHAFYWIVLGLVALNTVCVAIVHYDQPPWLSNFLYYAEFTFLGLFLSEM
FLKMYGCGPRLYFHSSFNCFDCGVIIGSIFDVVWTVIRPETSFGISVLRALRLLRIFKIT
KYWASLRNLVVSLMSSMKSILSLLFLLFLFIVVFALLGMQLFGGQFNFEEGTPPTNFDTF
TAAIITVFQILTGEDWNEVMYNGIKSQGGVNSGMWSSVYFIVLTLFGNYTLLNVFLAIAV
DNLANAQELTKEEQEEEEAINQKHALQKAKEVSPMSVPGFPSTEREFRRHKHMSIWEART
SQLRRRMQISGREALFAEALQGLEGSRYRRHRSRIFEGESLRRLGDQQVDQLGEGGNRDA
FKSRSLRNNWQPTGANKEGSSLKLNGDQDHRQSLAPVRSVEAGESFRMAEPVRVKRRYRS
LYKEAKLGLDESAETTLSHRVGKSKEEGLLQRLPEEQESSQTTPGPEERDAEQQVAFSWQ
GRPHTSTNRNLDSDTSLMGKQLEKASTRGTESGKVDSAKNSKQVNEQTSLLNLQLDLQIT
QPSRGEKDLTTSPRDIDQDKTREQTEIDVDCENTETPMDSLVTPGNTCSSSSSVKDEEKK
SKSIMPYSSMFLFSTTNPVRRACHFIVNLRYFEMSILLVIAASSVALAAEDPINKDSSRN
HMIDIGLIFHEGSYFRDVWNILDFIVVSGALVAFAFTGSSGKDINTIKSLRVLRVLRPLK
TIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKMTKQ
ECRGQFVLYETENKIVDREWKRYDFHYDNVVWALLTLFTVSTGEGWPQVLQHSVDVTEAD
QGPIPGNRMEMAIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMLEESSLEKNERACID
FAISAKPLTRYMPQNRQTFQYRVWHFVVSPSFEYTILTMIALNTVVLMMKHHSPPPGFVS
VLKLMNIAFTVTFTLECILKIIAFGFLNYFRDSWNVFDFVTVVGSISEIIVTEFNLKFVN
LSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGN
IGLDDQTPINRHNNFHTFFNALTLLFRSATGESWQEIMLACLSGKECEGTREPSCGTDVA
YFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRI
HYTDMYQMLTLMSPPLGLGKKCPSKVAYKRLVLMNMPVSEDKTVHFTSTLMGLIRTALQI
KLARGGADKQQLDAELRKEIMTIWPYLSQKTLDLLVPMHTYSDLTVGKIYAAMMIMDYYK
QSKNKKYQMLQEEQSRTPMFQRMEASTLPPQIISSTKGLPFLQADRGPDLDSRSEFAPLV
PLPPVMFQQGRTSGQGEEIHNQRPKELKKVKVEYPHYGHYLPIENQGRAVSMPRLETESE
SAEDPSPMKRSFSTFAANQSDSSWLNEYSLERAGPEDLYQKWSRRPLRSSSRSSNAGSRE
RGRSKERKHLLSPERSLCNSSERPQHLQHRCHDQRLSRSPSPGHSHCLREQVNSSVNETP
MPCTSAASTPKQGRRQLPQTPTTPRPHISYSPVAQCPDTLAPSSVQASPRSREARYQSLR
IQPSKTLWSESPGLSKKSESQHSTPLRYISEPSLTLHDELGSLDQALGEETLTFEAAVAT
SLGRSHTISSAPPIRHSWQLPNGSYRSRAARCGATTLADPFTDTDEDDKC
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcatctccatccgccacatggtcaagtcccacgccttctactggatcgtcctg
ggtctggtggctcttaacactgtgtgtgttgccatcgtccactatgaccagcctccatgg
ctctccaacttcctttactatgccgaattcacctttctgggtctctttctctccgagatg
tttctaaagatgtacggctgtggtcctcgactgtattttcactcctccttcaactgtttt
gactgtggggttattatcggcagtatatttgacgtggtatggacggtaattcggccagaa
acatcatttggcatcagcgtgctccgcgcgttgagattactccgaattttcaagatcaca
aagtactgggcatctttgcggaaccttgtagtttcattaatgagctcgatgaaatccatc
ctcagcctcctgttccttctcttcctcttcattgttgtgttcgctctgctgggaatgcag
ctgtttggtggtcaattcaacttcgaagaaggtacacctccaaccaactttgacaccttt
actgctgcgatcatcactgtgtttcagatcttgacgggcgaagattggaatgaggtgatg
tacaatggaataaaatcgcaaggaggcgtcaactcaggaatgtggtcttctgtatatttc
attgtcctcacactctttggaaactatactctgctgaacgtgtttctggcaatcgcggtt
gataatctggctaatgctcaggagttgacaaaggaggagcaggaagaggaggaagccatt
aaccagaagcacgccctgcagaaggccaaggaggtcagccccatgtcagtcccaggcttt
ccctcaacagagagagagtttcggaggcataagcacatgtccatctgggaggccagaacc
agtcagctgaggagacgcatgcagataagcggccgcgaggctctgtttgccgaggcgctc
caggggctggaggggagcaggtatcgcaggcaccgctccaggatcttcgagggtgaaagt
ctccggcgtctgggcgaccagcaggtcgatcaacttggagagggcggcaatcgagatgcc
ttcaagagccgttcgctccgcaacaactggcagccgaccggggcgaacaaggaaggttcc
tcgctgaaactgaatggggatcaggaccacaggcagagcctggcaccagtccggagcgtg
gaggctggggagagcttcaggatggccgaaccggtgagggtcaagaggagatacaggtct
ctctacaaggaagccaaactggggctggacgagagtgcagagaccacgctgagccaccgc
gtgggcaagagcaaggaggaggggctgttgcagaggctgcccgaagaacaggaaagcagc
cagacaactcctggccccgaggagagggatgctgagcaacaggtggccttctcctggcaa
ggacggccacatacaagcacaaatcggaatcttgattcggacactagcctaatgggtaag
caactggaaaaggccagcaccagggggaccgagagtggaaaagtggacagcgcaaagaac
agcaagcaggtcaatgaacaaaccagcctgttaaacttgcagctggatctgcaaatcact
caaccttcaagaggagagaaggacctgaccaccagtcccagggacatagaccaagacaag
actcgggaacagacagagattgatgtagactgcgagaacacagagacacccatggattcc
cttgtcacaccaggaaacacatgcagcagcagtagttcagtgaaagacgaagagaaaaag
tccaagtcgattatgccgtacagctccatgttccttttcagcacgaccaacccggttcgc
cgggcatgccacttcattgtcaacctacgctactttgagatgagtatcctcctggtgatc
gcagccagcagcgtagctctagcggcagaggatcccatcaacaaagactcctctcggaat
cacatgatagacattggtttgattttccatgaaggctcgtatttccgtgacgtttggaac
attctggatttcatcgtagtgagtggagcactggttgcatttgcgttcacgggatccagt
gggaaggacatcaacaccatcaagtccctgcgtgttcttcgtgttttacggccattaaag
accatcaagcgactcccaaaactgaaggcagtgttcgactgcgtggtgacatcactgaag
aacgtgtttaacattctgatagtctacaaactcttcatgttcatcttcgcagtgatcgcc
gtgcagctcttcaagggcaagtttttctactgcacagatagcagcaagatgaccaaacag
gaatgcagaggccagtttgtactgtatgagacagagaataaaattgttgatcgagaatgg
aaacgctacgactttcattatgataatgttgtctgggctctactgacactgttcactgtc
tccactggagagggctggccgcaggtgctgcagcattccgtggatgtgacggaggctgat
caaggacccatcccagggaacaggatggaaatggccatcttctacgttgtatattttgtc
gtattccccttctttttcgtcaatatctttgtggccttgataatcatcaccttccaggag
caaggagacaagatgctggaggagagcagcctggagaaaaacgagagagcgtgtatcgat
tttgccatcagtgccaagcccctgacaagatacatgccgcagaaccggcagaccttccaa
tacagagtttggcacttcgtggtgtcgccttcgttcgagtacaccatcctgaccatgatt
gcgctcaacactgtggtcctcatgatgaagcatcattctcctccgccgggcttcgtgagt
gtgctaaagctgatgaacattgccttcactgtcactttcacactcgagtgtatcctcaaa
atcattgcctttggattcctgaactacttccgagactcctggaacgtgtttgactttgtg
acggtcgtgggcagcatcagtgaaattattgtgacagaattcaatctgaagtttgtaaac
ctgagcttcctgaagctgttccgtgccgcccggctcatcaagcttctacgccaaggttac
accatccgcatcctcctctggaccttcgtgcagtccttcaaggctcttccatacgtctgc
ctcctgattgcaatgctgttcttcatttatgccatcatcggcatgcagctttttggaaat
atcggcctggatgaccaaacccccatcaatcgacacaacaacttccacaccttcttcaat
gcgttgacgctgctgtttcggagtgcgacgggggagtcgtggcaggagatcatgctggct
tgcctgagtgggaaggagtgtgaggggaccagggagcccagctgcggcacagacgtcgcc
tacttttacttcgtctccttcatattcctctgctcatttcttatgctgaacctgtttgtg
gcggtcatcatggataactttgagtatctgacgcgggattcttccatcctgggcccacac
cacttggacgagtttgtgcgggtctgggcagagtacgatcgggctgcgtgcggtcgaatc
cattacactgacatgtatcaaatgctgaccctcatgtctccaccgttgggtctggggaag
aaatgtccttcgaaagttgcttacaagagactggtactgatgaatatgcctgtcagcgag
gacaagactgttcacttcacctccacgctcatgggcttgatcagaaccgcacttcaaatc
aagctggccagaggtggggcagacaagcagcagctggatgcagagctgcgcaaggagatc
atgacaatttggccgtacctctcgcagaagacactggatctcttggttcccatgcacacc
tattcggacttaacagttgggaaaatctatgctgccatgatgatcatggattactacaaa
cagagtaaaaataaaaagtatcagatgctgcaggaagagcagagccgaacgcccatgttc
cagcggatggaagcttccactctgcctccgcagattatctccagcactaagggtctgccc
tttctgcaggcggacagaggacctgacttggatagcaggagtgaatttgccccattggta
cctttgcccccagtcatgttccagcaaggccgaacttcaggtcaaggggaagaaatccac
aaccaacggccaaaggaactaaagaaagttaaggtggaatatcctcattatggtcactat
ctccccattgaaaaccagggccgggcagtgtccatgcctcgactggaaactgagtcagag
tctgcggaagacccaagcccaatgaagcgatccttctccacatttgctgccaaccagtca
gacagcagctggctcaatgaatactcactggagagagctggtccggaagatctctaccaa
aaatggagccgaagacctctgaggtcgtccagcagatcctcaaatgcaggcagccgcgag
cgaggccgttccaaggagcgaaagcacctgctgtcaccagagagatccctgtgcaactcg
agcgagcggcctcagcacctgcagcacaggtgccacgaccagaggctgtcccgctctccc
agcccaggccattcacactgtctgcgggaacaggttaacagttcagtgaatgagaccccg
atgccctgcacgtctgcagccagcacgcccaagcagggacggagacagctcccgcaaacg
cccaccaccccacggccacacatctcctactcgcccgtggcgcagtgccccgacaccctg
gcgccctcctccgtgcaggccagcccgaggagcagggaggctcgctaccagtcgctgcgg
atccagcccagcaagaccctgtggagcgagtcgcctggcctgagcaagaagagcgagagc
cagcactcgacgccgctgcgctacatctcggagccatcgttgaccctgcacgatgagctg
ggcagcctggaccaggcgctgggcgaggagacactcaccttcgaggcggccgtggccacc
agcctcgggaggtcccacaccatctcctccgccccacccatcagacactcctggcagctg
cccaacggcagctaccgcagccgggcggcgcgatgcggagccaccactctcgccgacccc
ttcaccgacaccgacgaggatgacaagtgctag
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integrated database retrieval system
