Leucoraja erinaceus (little skate): 129701093
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Entry
129701093 CDS
T09122
Symbol
dnajc6
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129701093 (dnajc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129701093 (dnajc6)
03110 Chaperones and folding catalysts [BR:
leri03110
]
129701093 (dnajc6)
04131 Membrane trafficking [BR:
leri04131
]
129701093 (dnajc6)
Spliceosome [BR:
leri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129701093 (dnajc6)
Chaperones and folding catalysts [BR:
leri03110
]
Heat shock proteins
HSP40 / DNAJ
129701093 (dnajc6)
Membrane trafficking [BR:
leri04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
129701093 (dnajc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
129701093
NCBI-ProteinID:
XP_055498039
LinkDB
All DBs
Position
10:complement(43502710..43595896)
Genome browser
AA seq
1019 aa
AA seq
DB search
MSLLGNYRKKTNYDGYESLHLVDTGSGDLESRPPAGDAVIPAPAPAPAPEPAAAAAATAA
SGSIPQPARYSTMDRSGTSAPDMEPIFGGGLLDMVKGGAGRLFSNLKDNLKDTSSKVMQS
VASYAKGELNISYITSRIIVISYPAEGVELSFKNQIDDVRSFLDSRHLDHYTIFNLSQKS
YRSAKFHNRISECSWPARQAPSLHNLYAVCKNIHHWLQQNPKNVCAIHCVDGCPASAILV
CGMFCFCHLFSCPVPAIQLLNTKRPEPVLWPSHRRYIGYICEMVSDKPTLPHCKPLIIKT
VTVSPVPCFNKQRNGCRPFFEVFIGETKIFSTAQEYDKMREHRIQEGKVFASLGVSAHGD
VVVAASHMRSTIGGRLQAKLTNTQIFQIQVHTGFIAPGTTILKFAKSELDACDSPEKYPP
LFHVILEVEVESTDKRFDLTPPWEERNTKDLVPNILFSSHQEHQETLAAGKSMGDLETAS
DNVKSTGQKTKSDKNGANPPSEDRTALVNEDSEPSDDELLSLSSQHSTASMEKQQRTQKC
CQTQASSQSTAPDSVDLLGLNGNATGQALPPAAQARSITTNSDLLNDLFGSTSSIPSAHG
SSGAPGSAHSTPRRSAGSPSLSPSPRICEGTAFGPFDSQANQNSQDLLGVFHNRSGATSP
VGQGEPVHQTARTPSPTPLSAPADPFNMGRVSPGLPCTPAVPVQQDLMGGWSMGSANVPA
GSAAWANRTASSGGVMGVSRSANTSPTSSIHSTPTRQPKPQTLDPFADLGTLGANLAGGS
SFSSKPTTPTGTSAGSFQPVGSPQKQSPQPAGGGSWQQNAGFGWQQGSSARQQPQTKPSK
PQQPVPQSSPQNRPNYNVSFASVIGSRDERGARGPPFGTRPKVADSNFEDLLSSQGFASQ
KDKRGPKTISEMRKEELAKDMDPEKLKLLDWIEGKERNIRALLSTMHTILWEGETKWKPI
GMADLVTPDQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFIELNDAWSEFESQGQKPLY
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcttggaaactatcgcaagaagaccaattatgatggctacgaatcgttgcat
ttggtggataccggttccggggatttggagagtcggccaccagccggcgatgcggtgatc
ccagcaccggcccccgccccagccccagagccggcagcggcagcggcagcaacagcagca
agcggctcaatcccgcaaccagcccgctacagcaccatggacaggtcaggtacctctgct
ccagatatggaacccatttttgggggaggcctgctcgatatggtgaaaggtggagctgga
cgtctcttcagcaatttaaaggacaacctgaaagacacctcttcaaaggttatgcagtct
gtagccagttatgccaagggagaacttaatatttcatacatcacatcaaggataatagtg
atatcctatcctgctgaaggagtggagttaagtttcaagaatcaaattgatgatgtgcga
tcattcttggattcaaggcacctggatcattatacaattttcaatttatctcagaaatca
tacagaagtgccaagtttcacaatagaatatctgaatgcagctggccagctcgacaagcc
cccagtttacacaacttgtatgcggtgtgtaagaatatacatcactggctgcagcaaaac
cccaagaatgtctgtgctattcactgtgtggatggctgtcctgcctctgccattttagtt
tgcggaatgttctgtttctgccatctgttctcttgcccagttccagccattcagttactg
aatacaaaacgaccagagcctgtactttggccttcacacaggcggtacattggatatatc
tgtgaaatggtttctgataaacctacgctcccacactgcaaacccctcatcattaaaacc
gtcaccgtgagcccggtcccttgcttcaacaagcagagaaatggctgccgacctttcttt
gaggtttttattggtgaaacaaagattttttcaactgcacaagaatatgataaaatgagg
gaacatcgaatccaggagggaaaagtctttgcttctttgggggttagtgcccatggagat
gttgttgtagctgcctctcatatgcggtcaacaattggcggaagacttcaagcaaagcta
acaaacacccagatatttcaaattcaagttcacactggattcattgctcctggaaccaca
atattaaagtttgcaaaatccgagttggatgcatgtgattctccagaaaaatatccccca
ttgtttcatgtaatattggaggtggaggtggaatccactgataaaagatttgacttgacc
ccaccctgggaagaaaggaacaccaaagatcttgtacccaatatcctcttttcaagccat
caggaacatcaagaaaccttagcagcaggtaaatctatgggggatttggaaactgcatca
gataatgtaaagagcacggggcaaaaaacaaaaagtgataagaatggtgctaatccaccg
tcagaagacagaacagctcttgtgaatgaagacagtgagccatctgatgatgaacttctg
tccctctctagccaacacagtactgctagcatggaaaaacagcagaggacacagaaatgt
tgccaaacacaggcatcttctcagtccacagctcctgacagtgtggatcttttgggcttg
aatggaaatgctacaggccaggcattaccgcctgccgctcaagccagatctataacaact
aactctgacttgctaaatgacttgtttggcagcacctcctctattccatcggcacatggg
agcagtggtgctccaggatcagcacattctacccctcgaagatctgcaggctctccctct
ctatcaccgtcaccaaggatttgtgaaggaactgcatttggtccatttgattctcaagcc
aaccaaaacagtcaggatttgcttggtgtttttcacaatcggagtggtgcaacttctcct
gttggacagggagagccggtccaccaaacagccagaacaccatcccctacaccactcagt
gctcctgctgatcctttcaacatgggtagagtctcccctggtcttccttgtaccccagct
gtccctgttcagcaagatctaatgggaggatggagcatgggatctgcaaatgtacctgct
ggttcagcagcctgggcaaacagaacagcttcctcaggaggagtcatgggtgtgagcagg
tcagccaacacaagtcctacaagctcaatacatagcacccctacgcgccagcccaagcca
cagacactggatccctttgctgacctggggacacttggtgccaatttagcaggtggttca
tcattttcaagcaaacccaccacacctactggaacatcagcaggatcatttcagccagtg
ggttctccacagaaacaatcccctcaaccagcaggaggtggctcttggcaacagaatgca
ggatttggttggcaacaaggttcatctgcccggcaacagccacaaactaaaccgtcaaag
ccccagcaaccagtgccccagtcttctccacaaaatagacccaactataacgtgagcttt
gctagtgtgattggttctcgagatgaacgtggggcacgaggacctccttttggaactcgg
ccaaaggttgcagatagtaactttgaagacctgctgtcaagccaagggtttgcttcccag
aaggacaagaggggtcctaagacaatatctgaaatgagaaaggaagaactggctaaggac
atggatccagagaaattgaagcttctggattggattgaaggaaaagagagaaatattcga
gcattgttgtcaacaatgcatactatattgtgggaaggagaaactaaatggaagcctatt
ggtatggcagatctggtaactcctgaccaagtgaaaaaagtctatcggaaggcagtactt
gtagttcatcctgataaagccactggtcagccatatgaacaatatgccaagatgatattc
atagaactgaacgatgcctggtcagaatttgaaagtcaagggcaaaagcctctgtactaa
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