Leucoraja erinaceus (little skate): 129701138
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Entry
129701138 CDS
T09122
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129701138 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129701138 (tprb)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129701138 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
129701138
NCBI-ProteinID:
XP_055498130
LinkDB
All DBs
Position
10:47675094..47742185
Genome browser
AA seq
2376 aa
AA seq
DB search
MAAAVLQQLLDRAEFAKIPKNVVSKLEKLISDKDVDVDTVKAKYERLKVDSEQQYFEVEK
RLTQTQEKLVSETQECQKLREELSTLNDQLKDTKGKNKDLESAKDKLMNTESQLSRAKNE
LDNEKRELVRTLERRLQEVEHLNGDLKRLNDKLVEAHSAKIDLQLKLDELQVSEVSIKYR
EKRLEQEKELLMSQNSWLNTELKTKTDELLGLRREKSNEILELRCNLENKKDEVCSLEEQ
IRTLKSAKENFEEQVEDLMNKLKESKEQSATMEERFRNELNAHVKLSNLYKGSADDSETK
ATELSRAVEELHSLLKQANEAHKLTEDRLSETETSKTKAAADQHEKIMKLEKELENANHL
LTTTKHKGAATLSEEELAAMSPTAAAVAKIVKPGMKLTELYNGYVEAQDQLLLARQENKR
VNKYLDEIVKEVEMKAPLLKRQREEYERVQKAVANLSAKLEDAMKEIRRLQKCTDEANKH
SSLLTRENQRHKMQVSDLSQQNRVLLMELEDARGNHILREDEVSSDDISSSSEVITQHLV
TYRNVEELQQQNQQLLVTVRELAEKQEKEEQEKTASRISELQLNLAEALNELERLREARS
HQMQLVESIVRQRDMYRTLLAQMTGVTIPIQGNATEEMPLISSTPKRSPGQTKTLPLTST
PAPIPSAESTELVQARTALKQLQLHFENYKKEKAENDRMLNEQNEKLQDQLTQMRTQSTK
LSTQLEFASKRYEMLQNNVDGFRREIASLRDRCQKLTTTVQKQEHIINSMTQDLRASNEK
LALEETRGENLRKEKDMLKMVEIRLTQERDSKFAEHRGQSLLLTNLQSIQLSLERAETET
RQRLNSQIEKQEREIEKLKKKCDYEVDQRHLLVRNQEIQLREIKKQIETESILHTKTKDL
LKNSDQEISSLKLHLNNLETKLAETIGSVSKGESDMEEDVDNLRAQLRQAEEQASDLRER
LKTTTTNVEQYRDLVLSLEDSLSKEKQVTEEVRVAVESRLKESAEYLVQLEKRLVEAENE
KQALTDEKHKAIENLEQQTSELRRNLSSLQAELQDAVQRTATAATNEQQARADCQEQARV
ASEAQNKYERELMLHAADVEALQIAKEQVSTNAQVRQKLEDTSQRAEAQMVECKAAKAEI
ERILKDEVIKLTARCGDLQKQNKLLLEQVESLSNKMVTAVQETTQSSFNISFNEEGKSQE
QLLEILRFVRREREIAETKFEVAQVEALRYRQRVENLERELKEVQDSLNSEREKVQVTAK
TLAQHDELMKKTETMNVLIETNKMLRDEKERLEQELQQSRAKIRKLESDILPLQESNTEL
SEKSGMLQAEKKLLDEDLKRWKACAQQLISQQKETDPDEYKKLISEKDTNTKRIQQLTEE
TGKLKTEVARLNASSSVSQRDVQTLKTELSRVSVDRDKLKQEMMARVADIQEKNKTITQV
KKIGRRYKTQYEELKAQYDKMVAETSSQRSAEQQAEQSSVQATQDLQDALAQSESRAKAL
ESQAEALQKSVSEKESEVKKLQDEVTQLQGELSRLRQELQEKANLEEQLRQQILEKEEKT
KKAILVAKQKITQLAGLKEQLAKENEELKQHNEEFKQRVSSLDQQREELEVRMSALKSQY
DGHITRLKRELKEHQERHEQREEPQELTIKTSEPQRQLDPQRQITLKQTTVSTDRGSSCS
SDPPTANIKPTPLVATPSKVAAGPAPGSKSTPRASIRPMVTPATVSGPATTPTATVMPTT
QVETQEAAIQSEGPVEHVTVFGSASGTVRSTSPNIPSLSQPILTVQQQQTQATAFVQPTQ
QSLQQIEPANQELSTNLGDVVQNTQLERPSTSTAVFGTVSGSTTMSKRQREDDDEMSADN
TVHGQDESLEHQPKKLKLTQRAEEHMQEVDESAETDTEMQMQSENLDSQDSLTQVVIEEY
PPSQLMEDNEEISHPLNLIPQPSEHQQNTQSSQNSQTQTEYIIIESDEDQDNEEDQEQEE
YEEDEEEEEEDDDTGIEDGDGEDSNEGSAEGENNYDDGNVEVADGIDPSADEQTTRESTH
ISEDNSGGEGSVTTTESYTPEAPREQQQQQVAERQAPRLLRSPRRPPHPLPPRLTIQPPA
QELGPPAQRFPPARRPSSSRGGIQLTPGIGGVHQHFFDEDDRMVPSTPTLVVPHRSDGFA
EAIHSPQVTGVPRFRFGPPEDMNQTSSSQSDLGQLASQGGLGMYETPIYLAAVHEDESGG
RSVPTTPLQVHAPVTVFNEGPQADVTETASQSVPMIATSTSNLTSTVESGGGDDGDEVFI
EGADQEGLGSDVMLEIEGHQEEESAQPSEETDIPSTSQDPPSSSADAAISRPKPLRRVRL
YPQMGRTAVGGRQFLSRRGMNLSMGGRRGINRGNHS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgtgttgcagcagttgcttgatcgcgctgaatttgccaaaatacccaaa
aatgtcgtgtccaagctcgagaagctcatctccgacaaagatgtagacgttgatacggtc
aaggccaagtacgagcgattgaaagtggatagtgagcaacagtactttgaagtggaaaaa
cgactgacccagacacaggaaaagttagtatcagagactcaagaatgtcagaaattgcgt
gaggaactttctacacttaatgatcaattaaaagatactaagggcaaaaataaggaccta
gaatctgcgaaggacaaactaatgaatacagagagccagctttctcgtgcaaaaaatgaa
ttagataatgaaaaacgagagctagtgagaacacttgaacgtagattacaggaagtggaa
catttgaatggggatttgaaacgtctaaatgataaacttgtggaagcgcattcagcaaag
atagaccttcaattaaaactcgatgaacttcaagtatcagaagtttctattaagtatcgt
gagaaacgtctagagcaagaaaaggaattattaatgagtcaaaacagttggttgaataca
gaattaaaaacaaaaactgatgagctgctaggacttcgtcgagaaaaaagcaatgaaatt
ctcgaactccgatgtaatttggagaacaaaaaggatgaggtttgcagcctggaagagcaa
attcgtactttaaagtcagctaaggaaaactttgaggaacaagttgaggatttaatgaat
aagttgaaggagtccaaggaacagtcagcaaccatggaagagagatttagaaatgaattg
aatgcacacgtgaagctgtccaatttgtacaagggttcagctgatgactctgaaactaaa
gcaacggaactcagcagagctgtcgaggagcttcacagtctattgaaacaggcaaatgaa
gctcataaattaactgaagatcggctgagtgagacagagacctctaaaaccaaagcagct
gctgatcagcatgaaaagatcatgaaacttgaaaaagaattggaaaatgcgaaccatctt
cttacaacaaccaagcataaaggagctgccactctatcagaagaggagcttgcagcaatg
tcacctactgcagctgctgttgccaagattgtgaaacctgggatgaagctcacagagtta
tataatggatatgttgaagcccaagatcagctgctattagcgagacaggaaaataagaga
gtgaataagtatttggatgaaattgtgaaagaagtagagatgaaggctccgcttctgaag
cgtcaacgcgaagaatatgaacgtgtgcaaaaagcggtggcaaatctctcagccaaatta
gaagatgccatgaaggaaattcgacgtttgcaaaaatgtactgatgaggcgaataagcat
tcttcattgcttaccagggagaaccagagacacaaaatgcaagtgtcagatctctcacag
cagaatagggtgcttctgatggaattagaagatgcacgaggaaatcatattttgcgtgaa
gacgaagttagttctgatgacataagcagttcttctgaagtaattacacagcatctggtg
acctatcgcaatgttgaggaactgcaacaacagaatcaacaactactggtgactgttcgt
gaacttgctgaaaaacaggaaaaggaagagcaggaaaaaactgcttcacgaatttctgaa
cttcagctgaatcttgcggaggctctcaatgaacttgagcgacttcgtgaagccagaagt
catcagatgcaactagtggaatcaattgttcgacagcgggacatgtaccgtacgttgctt
gcacagatgactggagtgacaattccaatccagggtaacgcaacagaagaaatgcctttg
atctcatccactccaaaaaggtctccaggtcaaacaaaaacattgccactcacgtccact
ccagctccaattccttcagcggaatctacagaacttgttcaagcaagaacagcattgaaa
cagcttcaattacattttgaaaattacaaaaaggaaaaggcagagaatgacagaatgtta
aatgagcagaatgagaaacttcaagatcaactgacgcagatgagaactcaaagcacaaaa
ctgtccacacaattagaatttgcctccaaacgatatgagatgctgcagaacaatgtagat
ggattccgccgtgaaatagcttctttgcgagataggtgtcagaagcttaccacaacagtt
cagaagcaagaacacataataaacagcatgacccaagatttgcgagcatcaaatgaaaaa
ttggctttggaggagactcgaggagaaaatctgaggaaagagaaagatatgttgaaaatg
gtagaaatacgcctcacccaagaacgggattcaaagttcgcagagcacaggggacaaagt
ttgctacttacaaatttgcagtctattcagctgagtttggaacgtgcggaaactgagacc
aggcaacgtttaaacagccagattgaaaaacaagagcgtgaaattgagaaactgaaaaaa
aaatgtgactatgaagtggatcaacgtcatttgcttgtcagaaaccaagaaatccaactt
cgggaaatcaagaagcagattgaaacggagtctattcttcacacaaagacaaaagatctc
ctgaaaaattcagatcaagaaattagttccttgaagttacaccttaataatcttgaaact
aaattggcggagactatcgggagtgtttccaaaggtgaatctgacatggaagaagatgtt
gataaccttcgcgcccagcttagacaggctgaggagcaagcaagtgacttaagagaacgc
ctcaagactactaccaccaatgtggaacaatacagagatttggtccttagtttggaggat
tctctcagtaaagagaaacaggtaacagaagaggtgagggttgcggtcgaatctcgactc
aaagaatctgcagaatatctggtgcagttggagaagcgtttggtggaagctgagaatgaa
aaacaagctctcactgacgagaagcacaaagcgattgaaaatttggagcagcagacatct
gaactgaggaggaatctgagcagccttcaggcagagcttcaagatgctgttcagcgaact
gctactgcagcaaccaatgaacagcaagcaagggctgactgtcaagaacaggccagggtg
gcatctgaagcacagaataagtatgagcgtgaactgatgctgcatgctgctgacgtggaa
gcactacagattgccaaggagcaagtttcaacaaatgcacaggtccggcagaagctggaa
gacacttctcaaagggctgaggcccaaatggtggagtgcaaggctgctaaggctgaaatt
gaaagaattttaaaggatgaagttatcaaactgactgcacgttgtggggatctgcagaaa
cagaacaagttgttgcttgagcaagtggagagccttagtaataagatggtgactgcagtt
caagaaacaactcaaagttccttcaatatctctttcaatgaagaaggaaagtcccaggaa
cagctacttgaaattctgaggtttgtgcgacgtgaaagggaaattgcggaaacaaagttt
gaggttgcccaagtggaggctctgcgctatcgtcaacgagtggagaatttggagagagag
ctgaaggaggtgcaggacagtctcaattctgaaagggaaaaggtccaggtgactgccaaa
actctggcacaacatgacgagctgatgaaaaagacagagacaatgaatgttctaattgag
acgaataaaatgctacgagatgagaaagaaaggttggagcaagaactccagcaatcaagg
gcaaagattcgtaagctagaatctgacatcctacctcttcaagaatccaacaccgagctc
agtgagaaaagtggtatgttgcaagcagagaagaaattgctggatgaagatctcaaacgc
tggaaggcctgtgcccagcaattaatcagccagcagaaggagacggaccctgatgagtac
aagaagctaatttcagagaaagatacaaataccaaacgtattcaacaactaactgaggaa
actgggaaattgaaaactgaagttgctagactgaatgcatcatcatctgtatcacaacgt
gatgtacagacattgaagaccgagctcagtcgagtgtctgttgatcgggataaactaaaa
caagaaatgatggcaagggtggcagatatccaggaaaagaacaaaactattacccaggtt
aaaaagatcggccgtagatacaagacccagtatgaggagctgaaagcgcagtatgataag
atggttgctgaaacttcttctcaacgttcagcagagcagcaggcagaacaatcctctgtt
caagccactcaagatttgcaagatgctttggctcaatctgaatccagagctaaagcacta
gagtctcaggctgaagccctgcagaagtctgtaagtgagaaggaatctgaagttaaaaag
ttacaggatgaagtaacccagttgcaaggagaactttcacgcttgcgccaggaactgcag
gagaaagcaaaccttgaagaacagcttcggcaacagatactggagaaagaagagaagacc
aagaaagcaatattggtagccaaacagaagataacacagctagctggtttgaaggaacaa
ttggcgaaggagaatgaagagttgaagcagcacaatgaagagtttaagcagcgtgtcagt
agtttggatcagcaaagagaggagctggaggtgcgcatgagtgcactgaaatcacagtat
gacggtcacattactcgactcaaacgagagctgaaagaacaccaggaacgacatgaacaa
cgtgaggaaccacaagaactaaccattaagacttctgaaccacagagacagttggatcca
cagaggcaaattaccttgaaacaaactactgtatctacagacagaggaagttcatgctca
tctgatccaccaacggccaatatcaaaccaacccctctcgtggcaacaccgagtaaagta
gctgctggtccagcgcctggcagtaagtccacaccaagagccagtattcgtccaatggtt
actccagcgactgtctcaggaccggccacaacaccaactgcaacagtgatgcccacaaca
caagttgaaactcaagaagcagccatacagtcagaaggaccagtggaacatgtaaccgtt
ttcggtagcgcaagtggaacagtgcgttcaacgagtccaaatatcccgagcttgtcacag
ccaattttaacagtccaacagcagcagacacaggcaacagcctttgtacagcccactcaa
caatctcttcagcagatagagccagcaaatcaggaactttcaacaaacctcggagatgtg
gtgcagaacacccaattagaacgaccatccacttctacagctgtatttggaactgtttca
ggttccactactatgtccaagcgtcagcgtgaagatgatgacgagatgagtgcagataac
acagttcatggccaggatgagtctttggaacatcaaccaaagaagttgaaacttacccaa
cgagcagaagagcacatgcaagaggtggatgaaagcgcagaaacagatactgaaatgcag
atgcagtcagagaacttggattcacaggactctctcacccaagtggttattgaagaatat
ccaccttctcaactgatggaagataatgaagagatatcacatcctttgaacttgatcccc
caaccatcagaacatcaacaaaacacccagtcatcacaaaattctcagacacaaactgaa
tacattattattgagagtgatgaagatcaagacaatgaagaggaccaagagcaggaggaa
tatgaagaggacgaggaggaagaggaagaggatgatgatactggtattgaggatggtgat
ggtgaagatagtaatgagggtagtgctgaaggagagaataactatgatgatggcaatgtt
gaggttgcagatgggatagatcccagtgcagatgagcaaactacaagagaaagtacccac
atttcagaggataattctggaggtgaaggtagtgtcaccactacagaatcctacactcca
gaagctccaagagagcagcagcagcagcaggttgctgaaagacaagctccacggcttttg
agatcaccaagaagaccaccgcatcctcttcctccaagactaacaattcagcctccagcc
caagaactgggaccacctgcccagagattccccccagctcgacggccatcatcaagtcgg
ggaggtatccagcttactccaggcattggaggtgtgcatcagcatttctttgatgaagat
gacagaatggtacctagtacaccaacacttgttgtgccccaccgatcagatgggtttgca
gaagccattcattctccccaggttacaggagtccctcgctttaggtttggaccacctgaa
gatatgaatcaaactagttcaagtcagtctgatcttggacaattggcatcacaaggaggg
ctaggaatgtacgagactcccatttaccttgctgctgtgcatgaagatgagtctggaggc
cgcagtgtacctacaacaccattacaagttcatgcaccagtgactgttttcaatgaggga
ccacaagcagatgtaactgagactgcctctcaatctgtccctatgattgcaacatccaca
agtaatttaaccagcactgttgaatctggaggtggtgatgatggtgatgaagtgtttata
gaaggagcagaccaagaaggtcttggttcagatgttatgttggaaattgaaggacatcaa
gaggaagaatctgcacagccatctgaagaaactgatattccatccaccagccaggatcct
ccttccagttcagctgacgctgctatctcacggcccaaacctttgagaagggttcgactt
tatccacagatggggagaactgctgttggagggcgacagttccttagccgaagaggtatg
aacctttcaatgggaggaagaagaggcataaacagaggaaatcatagttga
DBGET
integrated database retrieval system
