KEGG   Leucoraja erinaceus (little skate): 129701250
Entry
129701250         CDS       T09122                                 
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129701250 (prpf38b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:leri03041]
    129701250 (prpf38b)
Spliceosome [BR:leri03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    129701250 (prpf38b)
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 129701250
NCBI-ProteinID: XP_055498358
LinkDB
Position
10:55589813..55608639
AA seq 553 aa
MANKTAIGNHQQQPQQQQPPPQQAGGSAKPASTIKQGNVLPLWGNEKTMNLNPLILTNIL
SSPYFKVQLYELKTYHEVVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVST
AFCLLYKLFTLKLTRKQVMGLITHTDSPYIRGLGFMYIRYTQPPADLWDWYEPFLDDEEE
LDVKAGGGCVMTIGEMIRSFLTKLEWFSTLFPRIPVPVQKNLDQYLKTRPRKIGKKDGKD
AVEDIERVSERRHSRSPRRSLSPRKSPRRSRSRSRHREGHGSFGFDKELERERERQKRER
EQVKDRERSEKDRHKSRSTDRGIDRRRSRSRDRHRSRSREKRNDKKDRDKEREKENERSR
RRDKDYDKDKERVSDRDRERIVEKELERSRDRDKRSRSKTEDRKRKEERREKDERKHKDD
KKDSRKDKKHSRSRSREKRHRSISPGKGHVSKRSRSKSKEKSKHRNEHKEKSNKRSISRE
RTDENDSEQLKKQCSHGKERAHKRSRSKERSHKQSHGDGKDQTGKPSHRSLSTEREDKSN
AEGWLQGSTTDDE
NT seq 1662 nt   +upstreamnt  +downstreamnt
atggctaacaaaacggccattggaaaccaccagcagcagccgcagcaacagcagccgccg
ccgcagcaagccggtggaagcgccaaaccggcctccaccatcaaacaaggcaacgtgctg
cccttgtggggcaacgagaagaccatgaacctgaacccgcttatcctcaccaacatcctt
tcctcgccctacttcaaagtgcaactgtatgaactgaagacttaccacgaggtcgtggac
gagatctatttcaaggttactcacattgagccatgggaaaaagggagcaggaagactgca
ggccagacaggaatgtgcggaggggttcgtggtgttggaacaggaggtattgtttcaact
gccttttgtctactgtacaaactgtttaccctgaagttaactcgcaaacaagtgatgggt
cttataacacacactgactctccatacatccgcggtttaggattcatgtatattcggtac
acacaacctccagctgacttgtgggattggtatgaaccctttttagatgatgaagaggag
ctagatgtaaaggccggaggagggtgtgtcatgactataggagaaatgattcgttcgttc
cttactaaactggaatggttctctactttattcccaagaattccagttccagttcaaaag
aatctggatcaatatctcaaaactcgccccaggaaaattggcaaaaaagacgggaaagat
gcagtagaagacattgaacgtgtctcagaacgtagacattcaaggtcaccacgaagatcg
ctaagtcctcgtaaatctcccaggcggtctcgaagcagaagtcgtcatagagaaggccat
ggttcctttggttttgataaggaattggaaagggagcgagagcggcagaaaagggaacga
gaacaggttaaagacagagagaggagtgagaaggatagacacaagtcgagaagcacagac
aggggcatagaccgcaggcgaagcagaagcagagatcgtcacagaagtcgaagcagagag
aaaaggaatgataaaaaagatagagataaagagcgggagaaggaaaatgaaagaagcaga
aggagggacaaggattatgacaaagataaagaaagggtaagtgatagagatagggagcga
attgttgaaaaagaactggagagatctagggaccgagataaacgtagccgatcaaagacc
gaagacagaaaacgtaaggaagagaggagagaaaaggatgaaagaaaacataaagatgat
aaaaaggattcgagaaaagataaaaagcatagcagaagtaggagcagagagaaaaggcat
cggagtattagtcctgggaagggtcatgtcagcaaacgcagcaggagcaaaagcaaagaa
aaatcgaaacatcgaaatgaacataaagagaaatcaaacaaaagaagcattagcagagaa
aggactgatgagaatgacagtgaacaactaaagaaacagtgtagccatggtaaagagaga
gctcacaaacgcagtcgaagcaaagaacgatctcacaaacaaagtcacggtgatggtaag
gaccaaacaggcaaaccaagtcacagaagtctcagtacagaaagagaggacaaatccaat
gcagaagggtggttacaaggcagtaccactgatgatgaatga

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