KEGG   Leucoraja erinaceus (little skate): 129701257
Entry
129701257         CDS       T09122                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
leri  Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:leri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:leri03400]
    129701257 (helq)
Enzymes [BR:leri01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     129701257 (helq)
DNA repair and recombination proteins [BR:leri03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    129701257 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD ResIII Helicase_C HHH_5 DNA_pol_lambd_f DGKD_4H DUF4332
Other DBs
NCBI-GeneID: 129701257
NCBI-ProteinID: XP_055498368
LinkDB
Position
1:complement(120644168..120698795)
AA seq 1078 aa
MDLDQAEESEDVNQWACIRKRVREVRRTVETPPSKRKNNNRTSVYEITLKGEKEEIQSAA
SVPMDHLDQVECDSQEDLFGDYDSFGDDSWLRAQFEDVEKKHSVCTSSPKRNEREEEAVD
CLTIQNSDTLGLQNETKMHKLLTEDAESLKDSSTIPVRSNIANEQFCSKTLPEIPAEADE
LPNSQLALMEGFNSPLVKHESKELEPEDILSFNCFVNNLSGSPLNTRMQYLNVQNQSKTT
SSGTHKRLSLKDQIKNAMTENANSPIPHSSRSKQLKELVLSEEINVAMKTIQATSDIDMG
PFYGLPSKVKDLIFLLKGIKELYEWQHVCLTLRCVQERKNLIYSLPTSGGKTLVAEILIM
QEILCRKRDALFILPYVAIVQEKVRDLSAFGIECNFLVEEYAGSKGRFPPFKHRKKNSLY
IATIEKAHSLVNSLIETERINSLGLVVVDELHMLGEGSRGAVLEMALSKILYTSKTTQII
GMSATLNNVSDLQHFLKAEHYTSNFRPIQLKEYVKIRDSIYEVDNKSEDGFTFARLLNYK
YSNDMKKIDPDHLIALVTEIIPQHSCLLFCPTKKNCENVSKMLCKYLSKSFLSVKAKEKC
ALIAELKDIGNGVICPVLRGTVPYGLAYHHSGLTNDERKVIEQAYSEGTLCLLTCTSTLA
AGVNLPARRVILRSPYVARDFLKRNQYKQMVGRAGRAGIDTEGESILITQEQDKKLVADL
ISKPMECCYSNLIHSSEKGIKDLLLSLIGLKVAQTLDKIVEFMDGTLLGVQQQHHFNEKS
FLEVMEQALQPLMEKGLIKGRMSRSSEGEEMCCQLEVTKLGHATYKASVDLDYCDTLNMD
LKKSLEGLVLDNYLHLIYLVTPYDMVSHCTPDWMIYFRQFHQLDVIEQNVFAAVGVPESF
LTKKASGQAVKKTVNGLVVKRFYMSLVLYSLFKEMNMWSVAQKFNLPRGFTQNLLSSTAA
FSSSVLHFCEELEEFWAYRALFTDLTQKLSYCVKPELIPLMEVSGVREARARQLYNAGYR
SLSYLANAIPDMLVKTIEHLSRRQAIQIVSSAKMLLNEKAEALLEEVEELVRLPTDIP
NT seq 3237 nt   +upstreamnt  +downstreamnt
atggatttggaccaggctgaggagagcgaggatgttaatcaatgggcttgtatccgaaag
cgagttagggaagttaggaggactgttgagactccaccaagcaagagaaagaacaataac
cgcacgagtgtttatgaaataacgttgaagggagagaaggaggagatacaatctgcagca
tcagtacctatggatcatctggaccaggttgaatgtgacagtcaagaggatctctttggg
gactatgacagctttggagatgacagctggttaagggcacaatttgaagatgttgaaaaa
aaacattctgtttgcacttcaagcccaaagagaaatgaaagggaagaagaagctgtggat
tgtttaacaattcagaattctgacacacttggtttacagaatgagactaaaatgcacaaa
cttctcacagaagatgctgaatcacttaaagattccagtacaattcctgtacgaagtaat
attgcaaatgaacaattttgttctaaaactttgccggagattcctgctgaagcagatgaa
ttaccaaactcacaacttgcactaatggagggatttaattctccactggtaaaacatgaa
agcaaagagttagaaccagaagacatcttgtcattcaactgctttgtcaataatctttct
ggcagtcctttgaatacaagaatgcaatatcttaatgttcaaaaccaatcaaagactaca
agttctggaacacacaagaggctcagccttaaagatcagattaaaaatgcaatgactgaa
aatgctaattcaccgataccacactcgtcaagaagcaaacagttgaaggagcttgtccta
tctgaggaaattaatgttgcaatgaaaactattcaagccacatcagacattgatatgggg
cctttttacggacttccaagcaaagttaaggatttgattttcctgttgaaaggcatcaaa
gagctttacgagtggcaacatgtttgtctgacgttaagatgtgtgcaagaaagaaaaaat
cttatttattcactgcctacaagtggcgggaagacattggtcgctgagattttgatcatg
caagagatactgtgtaggaaaagagatgcactgtttatattgccatatgtggctattgtc
caggagaaggtacgagatctgtcggcttttggaatagaatgcaatttcttagtggaagag
tatgctggaagcaaaggcaggttcccaccattcaagcatcgcaagaagaattctctctat
attgccaccattgagaaggcccacagtttagtgaattccctcatagaaacagaaaggatt
aatagtttggggcttgttgtggttgatgagctgcacatgcttggtgaagggagtcgtgga
gcagtcctggaaatggcattgtctaaaatcctctacacaagcaaaaccacacaaatcatt
ggaatgagtgcaactttgaataatgttagcgatttgcagcactttctgaaagcagaacat
tataccagcaactttcgacctatccagttaaaagaatatgttaaaattcgagatagtatt
tatgaagtggacaacaaatcagaagacggttttacatttgctcgcctgttgaactacaag
tattcaaatgatatgaagaagattgatccagatcatctaattgcacttgtgactgaaatt
atcccacaacactcctgtcttttgttctgtccgactaaaaagaattgtgaaaatgtgagc
aagatgctctgcaagtatttaagcaagtcattcctttctgtaaaggcgaaagaaaaatgt
gctcttattgcggaattgaaagacatcggaaatggtgtgatatgccctgttttacgtgga
accgtgccttatggattagcataccatcatagcgggctgacaaatgatgaaagaaaggtt
atagagcaggcctactctgaaggaacactctgcttgctaacttgtacatcaacacttgcc
gctggtgttaacttaccagctcggagggttatcctgagatctccttatgtggctagggat
ttcctgaagagaaatcagtacaaacagatggttggtagagctggacgagctggtattgac
acagaaggagagagcattctcataacgcaggagcaggataagaagctggttgcagactta
ataagtaaaccaatggagtgttgttatagcaatcttatacatagcagtgaaaagggaatt
aaagatctgctgttatccctaattgggctaaaggttgcccagacacttgataaaattgtt
gagttcatggatggcactttacttggtgtgcagcagcaacaccacttcaacgaaaaaagc
ttcttggaggtcatggaacaagctcttcagccattgatggaaaaaggtttaataaagggc
agaatgtcgaggagtagcgaaggtgaagagatgtgttgtcaattagaagtcacaaagctg
ggtcatgctacctacaaagcatcagtggacttggattactgtgatactttgaacatggat
ttgaagaaaagtttggagggattggtgcttgataactaccttcatttaatctacttggta
acgccatatgatatggtttcccattgtactccagactggatgatttactttagacagttt
catcagttggatgtaattgaacaaaatgtctttgccgcggtgggtgtaccagagagcttc
cttacaaagaaggcatctggtcaagccgttaagaagactgtaaatgggcttgtcgtaaaa
cggttctacatgtccttggtcctttattccctcttcaaagagatgaacatgtggtctgtg
gcgcagaagtttaacttgccccgcggctttacacagaatttgttgagttcaacagcagct
ttctcctccagtgtcctgcatttctgcgaggaattagaggaattctgggcatatcgtgca
ctctttacagacctcactcagaaactgtcttattgtgtgaaaccagaacttattcctctt
atggaagtatctggagtccgagaggctcgtgctcgacagttatacaatgctggctacaga
tctttatcttatctggctaatgcaatccctgacatgttggtcaaaacaattgagcacctg
tccagacgtcaggctattcaaattgtttcctctgctaagatgctgctaaatgaaaaagcc
gaagccctactcgaagaagttgaagagctagtgagactgcccactgacataccgtaa

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