Leucoraja erinacea (little skate): 129701349
Help
Entry
129701349 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-C2-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701349
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
DUF4625
Motif
Other DBs
NCBI-GeneID:
129701349
NCBI-ProteinID:
XP_055498459
LinkDB
All DBs
Position
11:complement(21906678..21909204)
Genome browser
AA seq
791 aa
AA seq
DB search
MMAYIPRFALTAFACMFVICAPGPISGQIRYSIPEEMVQGAYVGNVAVDLGLNVRELSAR
KFRLSSDDGRRYMKVSLDNGIMSIRERIDRERICGQNNKCTVYFETILENPLEVYHGELE
ILDVNDNSPTFSQSSIVLQISEASAPGVRFRLEGADDPDIGTNTVAAYTISSSEHFSLKT
QRAEDGIMIAELLLXEIFGREQQSSFQLLLTATDGGTPQRSATAQILITVFDNNDNPPVF
DHDIYRGSVSENAPRGTLVLKVKANDLDEGLNSELTYCFSDISLIRARKLFSLDPVTGEL
RVKGLLDFEQVNSYSLDIRAQDHGSPAMTGHSKVLIKVTDANDNAPEINVPSPCNKIPEN
APPGRFICLINVMDRDSGANGQVRCELRQKNVPFRLQKVSNNYKLTTSETLDREAIAEYN
ILISVWDLGSPSLSSNTTIQIAISDVNDNEPQFTESSYNIYIMENNAPGVSVCTVTATDP
DLEQNSHISYSFLDNHIQNMPVSTYLTINSINGTIHALRSFDYEELKNFQIHVQARDAGV
PPLSSSAMVNVIILDQNDNAPVIVSPSAAVDTVPRSAGEGYLVTKIMATDADSGQNARLF
YQIVKSTDPGLYNVGQHSGEVRTARNSLQSDIALQSLVILVTDNGQPSLSSTVTMNIRVL
GNSSEGISELSTLVKTPEYFSDPNVYLIVIFSCTSVIFLLIIILLIGIKCKQDRNIIQGH
NSTSYCYNHGVTHGTFNGRSAMEETLCYPGTGRVVRGVELNQYSICLSPESAKSDFLFLK
PRDAPTSQAQS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtacataccgaggtttgccctcacagcatttgcttgcatgtttgtgatatgt
gcaccgggtccaatctccgggcaaattcgttattctattcccgaggaaatggtgcaaggg
gcatatgttgggaatgtcgctgtggatttgggcctgaatgtacgggaactgtcagctcgc
aaattccgactgagctctgatgacggaaggcggtacatgaaggtcagtttggacaatgga
atcatgtctattcgtgaaagaatcgaccgggaacgtatttgtggacagaataataaatgc
actgtatatttcgaaacaatactggaaaacccgttggaggtgtatcacggggaattggag
attcttgatgtaaatgacaattcccccactttctcgcagagcagcattgtcttgcagata
tcggaagctagtgcgcccggtgtacgtttccgactcgagggcgcggatgatcccgacatt
ggtacaaataccgtggccgcttatacaatcagttccagtgagcacttcagtctaaaaaca
cagagagccgaagacggtattatgattgccgagttgctgttangggaaatctttggacga
gagcagcaatcatcatttcaactcttgcttacggcgactgatggtggaaccccacagaga
tcagccactgctcagattctcattactgtattcgataacaatgataatccacctgtgttc
gatcatgatatttacagaggcagtgtaagtgagaatgcgccgcggggtacgttggtgctg
aaagtcaaagcgaatgatttggacgaaggactgaattcggaactaacatattgttttagt
gacatttctttgataagagcgcgaaaattattcagtttagacccagtcactggggagctt
cgagtcaaagggcttctcgattttgaacaagtaaacagctattctctggatattcgagcc
caggaccacggttcccctgcaatgacaggacactccaaagtactgatcaaagtcactgat
gcgaatgacaacgcacctgagataaatgtaccatcaccttgcaacaaaatcccggaaaat
gcgccaccaggacgtttcatatgtctgattaatgtaatggatcgtgattctggagcgaac
ggtcaagtacgttgcgagttaagacaaaagaacgtcccatttcgactgcaaaaggtatcg
aacaactataaattaaccacgagtgaaacgttggaccgtgaagccatcgctgagtataac
attcttatttcagtctgggacttggggtcgccgtcactctcatcaaatacaaccatccag
attgcaatttcggacgttaacgataacgaaccacaattcacagagtcatcctacaacata
tatataatggagaacaacgctccgggtgtgtccgtttgcacagtaactgcaacagatcct
gatctggaacaaaattcccatatttcctactcctttctcgataaccatatccaaaacatg
ccagtatccacttacctcactatcaattcaattaacggtactattcacgcgctgcgttcc
tttgattatgaggaactaaaaaacttccagatccatgttcaagcccgtgacgccggggtg
cctccgttgagtagcagcgccatggtgaatgtgatcatcctggatcaaaatgacaacgcg
ccggtaatagtttcaccttcagcagcagtggataccgtaccccggtcagcgggtgaaggg
tacttggtcaccaagataatggcaactgatgccgattctggtcagaacgcacggctcttt
tatcagatagtgaaatctaccgaccccggtttgtacaacgttggacaacattccggagaa
gtcagaacagcgcgcaatagtttgcagtcggatattgctttacaatctctagtcatcttg
gttacggacaatgggcagccaagcctgtccagcacagttacaatgaacattagagttttg
ggaaacagcagtgaaggaatcagcgaactcagtaccttggtgaagactccagaatatttc
tctgatccaaacgtttatttaatcgtcattttcagttgcacttccgtgatatttcttctg
atcatcattctgttgattggcatcaagtgtaaacaggacagaaatattatccaagggcat
aactccactagttattgttacaatcatggggttacgcacggcacgtttaatggaagatca
gctatggaggaaacattgtgttatcctgggacgggccgcgtagtccggggggtagaactg
aatcaatactcaatctgtctgtctccagagtcagcgaaaagcgattttctcttcctgaag
ccacgcgacgctcccacctctcaagctcaaagctaa
DBGET
integrated database retrieval system
