Leucoraja erinaceus (little skate): 129701350
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Entry
129701350 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-C2-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701350
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DNER_C
Motif
Other DBs
NCBI-GeneID:
129701350
NCBI-ProteinID:
XP_055498460
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Position
11:complement(21963591..21966678)
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AA seq
778 aa
AA seq
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MAHTRRFALTAFAYMFVICAPGPISGQIRYSIPEEMVQGAFVGNIAVDLGLNVRQLSARK
FRLNSDDGGRYLKVSLDNGIMSIREKIDRERICGQNDKCTVYFETILETPLEVYHGELEI
LDVNDNSPTFPQSSIVLQISEASAPGVRFRLEGADDPDIVTNSVTAYTISSSEHFILKTQ
RAEDGTLIAELLLGRSLDREQQSSFQLLFTATDGGTPQRSATAQIIITVLXINDNPPVFD
HDIYRGIVSENAPRGTLVLKVKANDLDEGLNSELTYCFSDISLIRARKLFSLDPVTGELR
VKGLLDFEQVNSYSLDIRAQDHGPPAMTRHSKVLIKVTDMNDNAPEIKVPSPCNKIPENA
PPGSFICLINVMDRDSGANGQVRCELRQKNVPFRLQKVSNNYKLTTSETLDREAIPEYNI
LISAWDLGSPSLSSNTTIHIAISDVNDDEPQFAESSYNIYIMENNAPGASVSTVTATDPD
LDQNSYISYSFLDNHIQNGSVYALRSFDYEELKNFQIHVQARDAGVPPLSSSAMVNVIIL
DQNDNAPVIVSPSEQSGSSAVDTVPRSAGQGYLVSKIMATDADSGQNAQLFFQIVKSTDP
GLYNVGQRSGDARNIFQSDTAVQTIVILVRDNGQPSLSSTVTMNIRVLENSTEGITESST
LVKNPVYFSDPNVYIIIIFSCTSVMFLLIIVLLIGIKCKQDRSIIQGYNTPSYCYNGGEL
HDSXNGRPAIEETLRYPRTGRVVRVPEPHHYSVCLSPESAKSDFLFLKPCGAPTSQAY
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacacacggaggtttgccctcacagcatttgcttacatgtttgtgatatgtgca
ccgggtccaatctccgggcaaattcgttattctattcccgaggaaatggtgcaaggggca
tttgttgggaatatcgctgtggatttgggcctgaatgtacggcaactgtcagctcgcaaa
ttccgactgaactctgatgacggagggcggtacctgaaggtcagtttggacaatggaatc
atgtctattcgtgaaaaaattgaccgggaacgtatttgtggacagaatgataaatgcact
gtatatttcgaaacaatactggaaacccccttggaggtgtatcacggggaattggagatt
cttgatgtaaatgacaattcccccactttcccgcagagcagcattgtcttgcagatatcg
gaagcaagtgcacccggtgtacgtttccgactcgagggggcggatgatcccgacattgtt
acaaactccgtgaccgcttacacaatcagctccagtgagcactttattctaaaaacacag
agagccgaagacggtactttgattgccgagttgctgttagggagatctttggaccgagag
cagcaatcatcatttcaactcttgtttacggcgactgatggtggcacccctcagagatca
gccacagctcagattatcattactgtattgtaaatcaacgataatccacctgtgttcgat
catgatatttacagaggcatcgtaagtgagaacgcgccgcggggtacgttggtgctgaaa
gtcaaagcaaatgatttggacgaaggactgaattcggagctgacgtattgttttagtgat
atttctttgataagagcgcgaaaattattcagtttagacccagttactggggagcttcga
gtcaaaggacttctagattttgaacaagtaaacagctattctctggatattcgagcccag
gaccatggtccccctgcaatgacaagacactccaaagtactgatcaaagtcactgatatg
aacgacaacgcaccggagataaaggtaccatcaccttgcaacaaaatcccggaaaatgcg
ccaccaggtagtttcatatgtctgattaatgtgatggatcgtgattctggagcgaacggt
caagtacgttgcgagttaagacaaaagaacgtcccatttcgactgcaaaaggtatcgaac
aactataaattaaccacgagtgaaacgttggaccgtgaagccatccctgagtataacatt
cttatttcagcctgggacttggggtcgccgtcactctcatccaatacaaccatccatatt
gcaatttcggacgttaacgatgacgaaccacaattcgcagagtcatcctacaacatatat
ataatggagaataacgctccgggtgcgtccgtttccacagtaaccgcaacagatcctgat
ctggatcaaaattcctatatttcctactcctttctcgataaccatatccaaaacggttct
gtttacgcgctgcgttcctttgattatgaggaactaaaaaacttccagatccatgttcaa
gcccgtgacgccggggtgcctccgttgagtagcagcgccatggtgaatgtgatcatcctg
gatcaaaatgacaacgcgccggtaatagtttcaccttcagaacaaagtggctcatcagca
gtggataccgtaccccggtcagcgggtcaagggtacttggtcagcaagataatggcaacg
gatgcagattctggtcagaacgcacagctcttttttcagatagtgaaatctaccgacccc
ggtttgtacaacgtcggacaacgttccggagatgcgcgcaatattttccagtccgacact
gctgtacaaactatagtcatcttggtcagggacaatgggcagccaagcctgtccagcaca
gttacaatgaacattcgagttttggaaaacagcactgaaggaatcaccgaaagcagcacc
ttggtgaagaatccagtatatttctctgatccaaatgtgtacattatcataattttcagc
tgtacttccgttatgtttcttctgatcatcgttctgttgattggcatcaagtgtaaacag
gacagaagtattatccaagggtataacacccccagttattgttacaatggtggagagttg
cacgatagtnttaatggtagacctgccatagaggaaactttacgctatcccaggacaggt
cgggttgtccgcgtgccggaaccgcatcactactcggtctgcctgtctccagagtcagcg
aaaagtgattttctcttcttgaagccatgcggcgctcccacgtctcaggcctattga
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