Leucoraja erinaceus (little skate): 129701351
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Entry
129701351 CDS
T09122
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701351
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701351
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
129701351
NCBI-ProteinID:
XP_055498462
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All DBs
Position
11:complement(22064077..22066941)
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AA seq
794 aa
AA seq
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MANSQQNNALEFRAMVLIFILHALHLGLGLIRYSIPEEMEYGYSVGNIAENLRITVRQLS
ARKCRLVSAEERQYLEVNVNTGVLFVSSRIDREQLCAQSPYCTIAFQIILETPLEMYRGE
VEIVDINDNSPSFPENAILLQMAESIAPGSRFPLERALDPDVGTNAVTEYTISRNDQFGL
NVNVREDGTKIAELVLEKSLDREQEASFQLALMAIDGGTPSRSGTIQINISVLDNNDNAP
VFENEVYTANLEENAPVGTLVVKIKAIDLDQGTNAELKYSFVNLVPERVREPFSLDPESG
EIKVQEQLDFEETNSYELDVQAEDNGTPAITGHSKILIRLIDVNDNAPEIKVTSLSGQVS
EDAAPGTVVALMDITDRDSGENGEVHCHITLGVPFKIQSSLDNHYKMTTSRALDREITSL
YNVHIIAWDSGSPPLSTNKTIQISVSDVNDNAPQFSQSSYTLYVMENNAPGASIFTPTAF
DPDLDQNSYISYSFRGNIQDSLEPTYLRIDSMNGTIYALRSFDYEKLKTFQIQVQARDAG
APPLSSSASVNVIILDQNDNTPVIVSPSEQNGSPAVQIVPQSAGQGYLVTKIMATDADSG
QNARLSFRILQAADPTLFSVGRSSGEIRTTRSILGHDDTSQTLVILVSDNGQPSLSSTAT
IRMSILGNVSEKISEDMDLHNDSGHSSDINLYLIVTFGSTSVLFLLTIVLLVVLKCKHDV
EADGRTVCCCKPRNSKEAFPRCSAQRDQLNCSAAGQTLPFPESYHYSACQSRESPQSEFL
FLKPYNPSASQWRC
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattcgcagcaaaacaacgccttggaatttagggcaatggttttaattttcatt
ctacatgcattgcacctggggcttggactgatacgttattcaatccctgaagaaatggaa
tatggctactctgttgggaatatcgctgaaaatttgcgaataaccgttcgacaattatca
gctcgaaaatgtcgcctggtctccgccgaagaaaggcagtatttggaggtaaatgtgaac
actggcgtcttgtttgtcagtagtcggatagacagagagcagctttgtgcacagagtcct
tattgtacaattgctttccagataatattagaaacccccctcgaaatgtaccggggtgag
gtggagattgtcgatataaatgataattcgccctctttcccagagaacgccattctcttg
caaatggccgaatctattgcaccgggctctcgcttcccactggagagagcgctcgatcca
gacgtggggacaaatgcggtcactgagtatactatcagtcgcaatgaccaattcgggttg
aacgtgaacgtcagagaggatggcacaaaaattgcggagctggtgttggagaaatcattg
gaccgcgaacaggaggcatcctttcagcttgccctgatggccattgatggaggcacgcct
tcgagatccgggaccatacagatcaacatcagcgtactggacaacaatgataatgcgccc
gtattcgagaacgaagtgtatacggcaaacctagaagaaaacgcacctgtgggtacttta
gtggtcaagattaaagctatcgatctggatcaaggtacgaatgctgaattaaaatactcc
ttcgttaatcttgttccagagcgagtacgtgagccgttcagcttggatcctgaaagtgga
gagatcaaagttcaagaacagctcgattttgaggagacgaacagctatgaacttgatgtc
caagctgaggataatggtacgcctgcgattactggacattccaagattttgatcagattg
attgatgtaaatgacaatgccccggagataaaggtcacctccctgtctgggcaagtctcc
gaggatgctgcgcccgggacggtggtggctttgatggatattactgatcgagattctgga
gaaaacggagaggttcactgtcatattacattgggcgttccctttaaaattcaatcctct
ctggacaaccattataaaatgacgaccagtcgtgcgttagatcgggaaatcacctcacta
tataacgtacatatcatagcctgggactctgggtctccccccttgtcaacaaataaaact
atccagatatcggtttctgatgtgaatgacaacgcgccacaattttcccaatcctcttac
acattatatgtgatggagaacaacgctccgggtgcttctattttcacaccgactgcgttt
gatccagatttggaccagaactcctacatttcctattccttcagagggaatattcaggat
tctctggagcccacttacctccgtatcgactcgatgaatggcaccatttacgcactgcgc
tcctttgactacgagaagctcaaaaccttccagattcaagttcaggcccgtgatgccgga
gcgcctccactaagtagcagcgcctcggtgaatgtgatcatcctggatcaaaacgacaac
actccggtaattgtttcgccttcagaacagaatggatcaccagccgtgcagatcgtgccc
cagtcagcgggccaggggtacttggttaccaagataatggcaaccgacgcagattctggt
cagaacgcacgactctctttccggatacttcaagcagccgatcccactctattcagcgtg
gggaggagttcaggcgaaatcagaacaacgagaagcattttgggccatgatgatacctcg
caaaccctggtcattttggtgagtgataatggacaaccgagcctgtcaagtacagctaca
atccgcatgtcgattttgggcaacgttagtgagaaaatatctgaagatatggatttgcac
aatgactctggtcattcgtccgatataaatctttatttaattgtcaccttcggatcaact
tcggttttgttcctgctgaccatagtcctattggttgtattgaagtgtaaacacgatgtg
gaagctgacgggcgcacagtttgttgttgcaagccaaggaattcgaaggaagcatttcct
cgatgttctgcgcagcgagatcagttgaactgtagtgcagcaggtcaaactctgcccttc
cctgagagttatcattactcggcttgccagtcacgggaatcaccccagagtgaattcctt
ttcctgaaaccttacaatccatctgcctctcaatggcgatgctaa
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