Leucoraja erinacea (little skate): 129701363
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Entry
129701363 CDS
T09122
Name
(RefSeq) protocadherin beta-17-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701363
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_4
DUF2259
DNER_C
Motif
Other DBs
NCBI-GeneID:
129701363
NCBI-ProteinID:
XP_055498472
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Position
11:complement(21679006..21681483)
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AA seq
825 aa
AA seq
DB search
MAQRSIFRVHGKSVISSIFLLCVWNLVSGQIRYSIPEELEQGAFVGAVGKDLGLSIEDLS
SRKFRMISAASKQYLDVNNKNGILFVSARIDREQLCGQSDNCVLLVEAVVENPVEQYLVQ
VDILDINDNSPNFPKSEIRLEISETAMPGARFLLEGAHDMDGRNNSVRIYQLAANYHFTL
EVQNVGKWKLPEVVLQNILDREKQPVYNLLLTALDGGIPERSGTAHVNIVILDVNDNTPI
FGKSVYSVSLSENMPLNSLVINLNATDLDEGRNGEIIYSFSSYNEPRITEIFTIIPTSGE
IRTKGIMDFEETSVYQIHVEAKDKSVQSLSTHCSVRVGIRDVNDNAPDLTLNSVSGTISE
NVPTGTLIAFIGVTDRDSNENGHIDCSISHNLPFDLKSSFSNSYRLVTNAALDRESTPQH
KITVTCKDRGIPPLSTTRTIVVNISDINDNAPRFTQPSYTTYVAENNEPGSYIGSVTALD
RDIDRNSQLSYSILENQIQSVPVSFYLFINSNNGSIYSKTPFDYERLKGFQFHVRAQDAG
LTSLSSDVAVKVIVLDQNDNPPMITANAIKSNSSLPVPRSADPGYMVTKVLASDADSGKN
AQLSYQLMQSSDPGLFIVSYNSGEVRTARRIKDSDATTQRLIIQVKDNGYPALSATTTFT
LTIVEEHTEGLLDFNEARDDLEDTQNLSLYIIITLGATSFVLLVVIIVLVVVICPMGSHS
ASGHACTLADSCCRRELEYRHSNVNLQIVPDSHFLPSLLEVHGNGSLSETYRYKIRSAPE
PRDIYFTPFSPQMHGTIEKYAKYAPTDSTKTRSSSANVVSVVEHI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaggagcattttccgcgtgcatggaaagtcggtgatatcatccatctttctg
ctttgtgtgtggaatctggtttccgggcagattcgctactccataccagaagaactggaa
caaggtgccttcgtcggagcagtcggcaaagatttgggtttgagcatagaggacctatca
agtcgtaaattcagaatgatatcagctgcatcaaaacaatatttggatgtaaataataag
aatggaattttatttgtaagtgcaagaatcgacagggaacagctgtgtggtcagagtgat
aactgtgtattgctcgtggaagcggtggttgaaaatcctgtggagcagtaccttgtgcaa
gttgatatattggatataaacgataattctccgaattttccgaaaagtgaaattcgtttg
gaaatttcagaaaccgcgatgccaggagcacgttttctgttagaaggcgcccacgatatg
gacgggagaaataattctgttcgtatttaccagctcgctgcaaattatcattttacgtta
gaagttcagaatgttggcaagtggaagttacccgaagtggtgttgcagaatattctcgac
cgagaaaaacaaccagtgtacaatttattactgaccgctcttgacggcggtattcctgaa
aggtcaggtacagctcacgtaaacattgttatcctggatgtgaatgataatacaccgatt
ttcgggaaatcagtgtatagtgttagtctaagcgagaacatgccattgaattccttagtg
attaacctgaacgcgactgatttagacgaaggtagaaatggcgagatcatttattctttc
agcagttacaacgaaccaagaataactgaaatatttacgattataccaacatcaggagag
atccgtacaaaaggaataatggattttgaagaaaccagtgtttatcagattcatgtggaa
gctaaggacaaaagtgtgcagtcgctatccacacactgcagcgtgcgagtggggatcaga
gatgtgaatgacaacgctcctgatttaactctaaattctgtttccggtacaatcagtgag
aatgttccgacgggaactttaatagccttcatcggcgtgacagaccgggattccaatgaa
aatggacacatcgactgttccatttcacacaacctaccatttgaccttaaatcttccttc
agtaattcatacagactagttacaaatgcggcactcgaccgagaaagcacccctcaacat
aagattacagtaacttgcaaagaccgtggtatccccccgttatctaccacccggacaatt
gtggtaaatatctcagatataaatgataacgcgccgcgctttacgcagccttcgtacacg
acctatgtggcagaaaataatgagccaggcagctacattggatcagtaacagctttggat
cgtgatatcgaccgaaattcacagctttcttactctattttggagaaccagatacagtca
gtgcctgtgtctttctacctctttatcaactcaaataatggcagcatctactcgaaaact
cctttcgattatgaacgacttaaaggttttcagtttcacgttcgggctcaagatgccgga
ttaacatcactttccagtgacgttgctgtgaaagtgattgtcttggatcagaacgacaat
ccacccatgataacagcaaatgcaataaaaagcaacagcagtctgcctgtgcctcgttct
gcagacccgggatatatggtaacaaaggtccttgcctccgacgcagattccggtaagaat
gcacaactgtcttatcaactgatgcaatccagtgacccgggtctctttatagtttcatat
aactcaggagaggtaagaactgctcggcgcattaaagatagcgacgccaccacacaaagg
ctgattatccaggtgaaagataacggctatcccgctctctctgctaccaccacctttact
ttgacaatagttgaggaacacacggagggtttgctggacttcaatgaagcgcgggacgac
ttagaagacacgcagaacttatcattatatataataattacactaggagcaacctcgttt
gttcttttggtggttataattgtacttgttgtagtcatttgcccaatgggcagtcattct
gcatctgggcatgcctgcactttagcagacagttgctgcagaagagagttggaatatagg
cattcgaatgtgaacttgcaaatcgtgccggattctcacttccttcccagtctacttgag
gttcatggaaatggatccctttcagaaacataccgttataaaattcgatcggcgcccgaa
ccacgagatatatatttcactccattcagtccacagatgcacgggaccattgaaaagtac
gctaaatatgcgccaaccgacagtacaaagacaaggagcagttcggcgaacgtggtgagt
gttgtagagcacatataa
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