Leucoraja erinacea (little skate): 129701365
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Entry
129701365 CDS
T09122
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701365
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701365
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
129701365
NCBI-ProteinID:
XP_055498475
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Position
11:complement(21702259..21704733)
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AA seq
824 aa
AA seq
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MLQKGIFRVLKKSAISSIFLLCALNLVSGQIRYSIPEELEHGAFVGNIADDLGLNTEELS
RRKFRLVSAASIQYLDVNRMNGILFVNARIDREQICGQRVNCVLVLEAVAESPVEQYRVE
IQILDVNDNSPIFQNKEIRLDVTESTLPGARFPLERAHDIDTVNNSIRTYQLSTNEHFSL
DIRSRGQWKSPELIMNKLVDREIKSSYHLLLTALDGGSPTRSGTAHISITILDTNDNPPV
FDKSVYIVSVKENVPLGTLLIKLNATDLDDGQNAAITYLFSSYNEPKITEIFTINPKSGA
IHLKETLDFEEGSVYEIDVEARDGNVQPLSTHCSVRVEITDVNDNAPLLTLNSISGTVSE
GDPSGTLIALISVIDQDSNKNGYIDCSISSNVPFDLKSSFSNSYRLITSAPLDRETTAQY
RITVTCKDRGIPPLSTSRTIVVNISDVNDNAPRFTQPSYTVYVTENIEPGSYIGSVTALD
LDINRNSQLSYSILENQIQSVPLSSYLYINTNNGSIYSKRPLDYEQIKRFQFHVRVQDAG
LPSLSSDVVVRVIVLDQNDNPPSIISWKSKNNTSLRVPRTAKPGHLVIKIFASDADSGKN
AQLSYQLNQASVPGLFKVSHSSGEVRSVRHFKDGDATTQTLIVQVKDNGFPPLSATTTLT
LTLIDEGISHQPDVTEPRQDLKETKQLTFYIIISLGATSFILLVVIIVLVVVICPIGNRT
ASGGACSFASCCSTKEWECQNSNFNLQVTPDFHIVPSLLEVRGNGSLSGTCRYKIRSAPE
SGAMFFAPLPHMAMVAGKETRYMLPDSPRMRKSCPDHVSDNNNV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaaaaggcattttccgtgtgcttaaaaagtcagcgatatcatccatctttttg
ctttgtgcgttgaatctggtttccgggcagattcgttactccattcctgaagaactggaa
cacggggccttcgtgggaaatatcgcagacgatttgggtttaaacacggaggagctatca
cggcgtaaattcagacttgtatcggccgcgtcgatacagtatttggatgtaaatcgcatg
aatgggattttatttgtgaatgcaagaatcgatagagaacaaatatgcggccagcgagtt
aactgtgtattggtcctggaagcggtagctgaaagtcccgtggaacagtaccgtgtggag
attcagattttagatgtaaatgataattcgcctatctttcagaacaaagagattcgttta
gatgttacagaatccacgctgcctggagctcgcttcccgttagagcgtgcgcacgacata
gatacggtaaataattctattcgtacgtatcagctctcgacaaatgagcattttagttta
gatatacgaagtcgtggacaatggaaatcacccgaattaataatgaacaaattggtcgac
cgagaaataaaatcgagctaccatttgttgctcacggctctagacggcggatcaccaaca
agatcaggtacggctcatatatctattacaatcttggataccaacgataatccgcctgtt
tttgacaaatcggtgtacattgttagcgtgaaagaaaacgtgccattgggcactttacta
attaagctaaacgctactgatttggacgacggacagaatgcagcgataacctatctcttc
agcagttataatgaaccaaaaataaccgaaatatttacgattaatcccaaatccggagcg
atacacctaaaggaaactttggatttcgaagaaggaagtgtgtatgagattgatgttgaa
gctagggatggaaatgtgcagccgctatctacacactgcagcgtgcgcgtggagatcaca
gatgtcaatgacaacgctcctctgttgactctaaattccatttctggcacagtcagtgaa
ggtgatccgagtggaactttaatcgcattgattagcgtgatagaccaggattccaataaa
aatggatacatcgactgctccatttcatctaatgtcccctttgacttgaaatcgtccttc
agcaattcctacagacttatcacaagtgcaccactggatcgagaaaccactgctcaatat
agaataactgtcacttgcaaagatcgcgggatcccacccttatctaccagccggacaata
gtggtaaatatctcagatgtaaatgataacgcgccgcgctttacgcagccttcgtacacg
gtatatgtgacggaaaatattgagcccggcagctacattggatcagtgactgctttggat
cttgatattaacaggaattcacagctgtcttactctattttggaaaatcagattcagtca
gtgccattgtcatcctatctctatatcaacacaaataatggaagtatctattcgaaacga
ccattagattacgagcaaattaaacgttttcagtttcacgttcgagtccaagatgccgga
ttaccatcactttcgagcgatgttgttgtgcgtgtgatagtcctggatcagaacgacaat
ccaccctccataatatcatggaaatctaagaacaacactagtttgcgtgtgcctcgaact
gcaaaacctggacatttggttataaaaatctttgcttccgacgcagattccggtaagaat
gcacaactgtcgtaccaactgaatcaggctagtgttcctggtctttttaaagtttcgcat
agttcgggagaagtaaggagtgttcggcatttcaaagatggcgacgcgaccacacaaaca
ctaattgtccaggtgaaagataatggttttccacctctttctgctactaccaccttgacg
ttgacattaattgacgaaggtatatcccatcagcctgacgttacagaacctcgtcaagat
ttaaaagaaacgaagcagttgacattttatataattatttcgttgggagcaacatctttt
atcttgttggtggttatcattgttttggttgttgtaatttgcccgattggcaacaggacg
gcttcaggcggtgcttgctcttttgccagctgctgcagcaccaaagagtgggaatgtcag
aattccaatttcaaccttcaagtgacgccggatttccacatcgttcccagtttgcttgag
gttcgaggcaacggatctctttcagggacgtgccgttataagattcgatccgcacctgaa
tctggtgcaatgttcttcgcgccattgccacatatggcaatggttgctggaaaggagacg
aggtatatgctgccggatagcccaaggatgaggaagagctgtccagaccacgtgagtgat
aacaataatgtgtaa
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