Leucoraja erinaceus (little skate): 129701369
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Entry
129701369 CDS
T09122
Name
(RefSeq) uncharacterized protein LOC129701369
KO
K16669
protocadherin Fat 4
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129701369
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701369
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Cadherin related
129701369
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ig_CLSTN
Cadherin_FAT4_N
DNER_C
Motif
Other DBs
NCBI-GeneID:
129701369
NCBI-ProteinID:
XP_055498479
LinkDB
All DBs
Position
11:complement(22022128..22046719)
Genome browser
AA seq
3183 aa
AA seq
DB search
MAYLPGFPFKMFAFMFLICATDIISGQIRYSIPEEMEQGAFVGNIAQDLGLNVRQLSARK
FRLSSDDGGRYMKVSLDNGILSIRERIDRERICRQAEMCTLSFKTTLENPLEVYRGELEI
LDVNDNSPTFGDGSIVLQISELSAPGVRFRLERAEDPDIGMNTVAAYTISFTEYFSIKTR
RTENDVLVPELLLDKSLDRELQSSFQLLLTATDDGTPQRTGTAQILVTVFDINDNAPVFD
DDIYRVSVSEDAPHGTLVLKVKANDLDEGLNAEITYYFSEVDLRKARNVFSLDPDSGEVR
VDGPLDFEETNSYSLDVQAVDHGSPSMTGHSNVLIKVIDVNDNAPEIKVTSTSNKIPENA
PPGTFITFIDVIDRDSGENGQVRCELPKNVPFRLQTALKHYTLVTSEMLDREVISQYKLL
ISAWDLGSPSLSSNKTINIAITDVNDNAPRFSESSYNVYVMENNAPGASIFAVTALDPDQ
EQNSYISYSFVDNYIQILPVSTYLTINTMNGTIYLLRGIDYEELKQFQILVQARDAGLPP
LSSSATVNVIILDQNDNAPVIVSPSQLGGSAAEEVMPRSAGQGYLVTKIMATDADSGQNA
RIFYQMVKSTDPTLFTVTKNSGEIRTARSILQTDTPVHTLVILVKDNGQPSLSSTVTMNI
RVLENSTEGITESSALVKNPGYFSDPNVYFIIIFSCTSVVFLLIIVLLIGIKCKQDRSII
QGYNTPSYCYNRGDSQDTYKGRPAMEETLRYPGTGRVVRVPEPHQYSVCLSPESAKSDFL
FLQPCGAPMSQNIYVSISWKEHFLPINRGQAWFSILIECGTMANLRRFPFNVFAFMLLIC
EQDLISGQIRYSIPEEMEQGAFIGNIAQDLGLNVRQLSARKFRLSSDGGGRYMKVSLDNG
ILSIRERIDRERICRQAEMCTLSFKTTLENPLKVYRGELEILDVNDNSPTFGDGSIALQI
SEASTPGVRFRLERAEDPDIGINTVAAYTISFTEYFSIKTRRTESDVLIPELLLDKFLDR
EQQSSFQLLLTATDGGTPQRTGTAQIIVTVLDFNDNAPVFDNDIYRVSVSEDAPHGTLVM
KVKANDLDEGLNAEITYSFSDVDLRKARNVFSLDPDSGEVRVDGPLDFEETTSYSLDVQA
VDHGSPSMTGHSNVLIKVIDVNDNAPEIKVTSTSNKIPENSPPGTFITFIDVIDRDSGEN
GQVRCELPKNVPFRLQTASKHYTLVTSETLDREVISQYKLLISAWDLGSPSLSSNKTIHI
AITDVNDNAPRFSESSYNVYVMENNAPGASIFAVTALDPDQEQNSYISYSFLDNYIQNLP
VSTYLTINSMNGTIYMLRGVDYEELKQFQILVQARDAGLPPLSSSATVNVIILDQNDNPP
VIVSPSELGGSAAEEVLPRSAGEGYLVTKIMATDADSGQNARIFYQMMKSTDPTLFTVTK
NSGEIRTARRILQTDVPVHTLVILVKDNGQPSLSSTVTMNIRVLENSTEGITESSTLVKN
PGYFSDPNVYLIIIFSCTSVAFLLIIVLLIGIKCKQDRSIIQGYNTPSYCYNRGDAQDTY
KGRPAMEETLRYPGTGRVVRVPEPHQYSVCLSPESAKSDFLFLQPYGAPMSQAECGHTTI
LIVVDRFSKMAHFVPLPKLPSAKEIVELMLLHIFRLHGLPVDVVSNRYLRVCIAIQISEA
SAPGIGFRLARAEDPDIGINTVAAYTISFTEYFSVKTRRTESDVLIPELLLNKSLDRELQ
SSLQLLLTAADGGTPQRTGTAQIHITVFDINDNAPVFDRDIYKVSVSEDAPHGTLVMKVK
ANDLDEGLNSEITYSFDDVDLRRARHLFSLDPDSGEVRVEGPLDFEETNSYSLDVQAVDR
GSPAMTGHSNVLIKVIDVNDNAPEIKVTSASKQIPENAPPGTFLTFIDVIDRDSGENGQV
RCVLPKNIPFRLQTSSNHYKLVTSDTLDREGISEYRLPISAWDLGSPSLSSNKTIHITIT
DVNDNAPRFAESTYNVYVMENNAPGASIFVLTALDPDLEQNSYVSYSFVDHFIQNLPVST
YLVINSMNGTIYALRSFDYEELKNFQIHVQARDAGVPPLSSSATVNVIVLDQNDNAPVIV
SPSELGASAAEEGLPRSAGQGYLVTKIMATDADSGQNARIFYQMVKSTDPTLFTVTKNSG
EIRTARSILHTDAPVHTLVILVKDNGQPSLSSTVTMNVRVLENSTEGITESSTLVKNPGY
FSDPNVYLIIIFSCTSVVFLLIIVLLIGIKCKQDRSIIQGYNSARYRYNRGDSQDTYKGR
HAMEETLRYPGTGRVVRVPEPHQYSVCLSPESAKSDFLFLQPCGAPMSQTRRERRAVSAF
YRVIKLQRIHPLSVSTRQLEYICFYFVVLPFNRGQAWFSILIECGTMAYLPRFPFNVFAF
MLLICEQDLICGQIRYAIPEEMEQGAFVGNIAQDLGLNVRQLSARKFRLSSDGGGRYLKV
SLDNGILSIRERIDRERICRQADICTVSFKTTLENPSEVYRGELEILDVNDNSPAFGDHS
IVLQISELSAPGVRFRLERAEDPDNGINTVAAYTVSFTEYFSIKTRRTESDVLIPELLLD
KPLDRELQSSFQLLLTATDGGTPQRTGTAQILVTVFDINDNAPVFDRDIYRVSVSEDAPH
GTLVMKVKANDLDEGLNAAITYSFSDVDLRRARNVFSLDPNSGKILVEGPLDFEETISYS
LDVQAVDHGSPSMTGHSNVLIKVIDVNDNAPEIKVTSASKQIPENAPPGTFITFIDVVDR
DSGENGEVRCELPKNIPFRLQTSSNLYKLVTSETLDREGISEYRLPISAWDLGSPSLSSN
KTIHITITDVNDNAPRFAESTYKVYVMENNAPGASIFVLTAIDTDLEQNSYVSYSLVDNF
IQNLPVSTYLAINPMNGTIYGLRSFDYEELKNFQIHVQARDAGVQPLSSSATVNVIILDQ
NDNAPVIVSPSYQSRSAAEEGLPRSASQGYLVTKIMATDADSGQNARIFYQMVKSTDPTL
FTVTRNSGEIRTARRILQTDTPVHTLIILVKDNGQPSLSSTVTMNIRVLENSTEGITESS
TLVKNPGYFSDPNVYLIIIFSCTSVVFLLIIVLLIGIKCKQDRSIIQGYNTPSYCYNRGD
LHGTFNGRHAMEETLRYPGTGRVVRVPEPHQYSVCLSPESAKSDFLFLKPRGDPDSGLKS
QAQ
NT seq
9552 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatctaccggggttcccattcaagatgtttgcattcatgtttctgatatgtgca
acggatataatttccgggcaaattcgttactctattcccgaggaaatggagcaaggggca
tttgttgggaatattgctcaagatctgggcctgaatgtacggcaattgtcagctcgtaaa
tttcgactgagctccgatgacggagggcgctacatgaaggttagtttggacaatggaata
ttatctattcgtgaaagaatcgatagagaacgtatctgtaggcaagcagaaatgtgtact
ctgtcttttaaaacaacactggaaaatcctttggaggtgtaccgcggggaattagagatt
cttgatgtcaatgataattcccccactttcggagacggcagcatcgtcttacagatatcg
gaattgagtgcaccaggtgtacgtttccgtctcgagagggccgaagatcccgacattgga
atgaataccgtcgccgcctacacgatcagtttcaccgaatattttagtataaagacacgc
cgaaccgagaacgatgttcttgtaccagagttgctgttagataaatctttggaccgagag
ctgcaatcttcttttcagctcttgcttactgcgacagacgatggcactcctcagagaaca
gggaccgctcagattcttgttactgtgttcgacattaatgataatgcacctgtgtttgat
gatgacatttacagggtcagcgtaagcgaggacgcaccgcatggtaccttggtgctcaag
gtcaaagcaaatgatttggacgaagggctgaatgctgagataacatattattttagtgag
gttgatttgcgaaaagcgcgtaatgtattcagtttagatccagacagtggggaggttcga
gtcgatgggcccttggattttgaagaaacaaacagctattctcttgatgttcaagctgtg
gaccacggttcgccctcaatgacaggacattctaacgtgctgatcaaggtcattgacgtg
aacgataacgcacccgagattaaggtgacatcaacttccaacaaaatcccggaaaatgct
ccaccaggaacattcataacgttcattgatgttatcgatcgtgattctggagagaacggt
caagtccgctgcgagttacccaagaacgttccctttagactacaaacagcattgaaacat
tatacattggttaccagtgaaatgttggaccgtgaagtgatttctcagtataaattacta
atttcggcatgggacttgggatcgccttcactgtcgtcaaataaaaccatcaacattgca
ataaccgatgtaaatgataacgccccgcggttttctgaatcatcctacaacgtgtatgtg
atggagaataacgctccgggtgcatccattttcgcagtaacagcactggatcctgatcag
gagcagaattcctatatttcttactcttttgtggacaattacatccaaatcctaccagtg
tccacttacctgactattaacacaatgaatggtaccatttatctgttgcgtggcattgac
tatgaggaactcaagcagttccagatccttgtacaagcgcgtgacgctgggttgcctccg
ctaagcagcagcgccacggtgaatgtgatcatcctggatcaaaatgacaacgcgccggta
atcgtttcaccttcacaactaggtggatcagcagcagaggaggttatgccccggtcagcg
ggtcaagggtacttggtcaccaagataatggcaactgatgcagattctggtcagaatgca
aggatcttttatcagatggtgaaatctaccgatcccactttgttcaccgttacgaaaaat
tcaggtgaaatcagaacagcgcgcagtattttacagacagatactcctgtacatactctg
gtcatcttggtgaaggacaatgggcagccaagcctgtccagtacagttacaatgaacatt
agagttttggagaacagcactgaaggaatcacggaaagcagcgccttggtgaaaaatccg
ggatatttctcagatccaaatgtttatttcatcatcattttcagttgcacttccgttgtc
tttcttctgatcatcgttctgttgattgggatcaagtgtaaacaggacagaagtattatc
caagggtataacactcccagttattgttacaatcgtggagattcgcaagatacgtataaa
ggaagacctgcgatggaggaaactttacgctatcctgggacaggccgggttgtccgcgtg
ccggaaccgcatcaatactcggtctgcctgtctccagagtcagcgaaaagtgattttcta
tttttgcagccatgcggtgctcccatgtctcagaatatatatgtttctatttcgtggaaa
gaacattttttaccgattaatcgaggacaggcctggttttcgatattaattgaatgcgga
acaatggcgaacctacggaggtttcctttcaacgtgtttgcattcatgcttctgatatgt
gaacaggatctaatttccgggcaaattcggtactctattccagaggaaatggagcaaggg
gcatttattgggaatattgctcaagatctgggcctgaatgtacggcaattatcagctcgc
aaatttcgactgagctccgatggcggagggcgctacatgaaggttagtttggacaatgga
atattatctattcgtgaaagaattgatagggaacgtatctgtagacaagcggaaatgtgt
actctgtcttttaaaacaacactggaaaatcccttgaaggtgtaccgcggggaattagag
attcttgatgtcaatgataattcccccactttcggagacggcagcatcgccttacagata
tcggaagcgagtacccctggtgtgcgttttcgtctcgagagggcggaagatcccgacatt
ggaatcaataccgtcgccgcctacacgataagtttcaccgagtattttagtataaaaaca
cgcagaaccgagagcgatgttcttataccagagttgttgttagataaatttttggaccga
gagcagcaatcttcttttcagctcttgcttactgcgacagacggtggcactcctcagaga
acagggactgctcagattatcgttactgttttggacttcaatgataatgcgcctgtgttt
gataatgacatctatcgggtcagcgtaagtgaggacgcgccacatggtaccttggtgatg
aaggtcaaagcaaatgacttggacgaaggactaaatgctgagataacatattcgtttagt
gatgttgatttgcgaaaagcgcgtaatgtattcagtttagatccagatagtggggaggtt
cgagtcgatgggcccttggattttgaagaaacaaccagctattctcttgatgttcaagct
gtggaccacggttcaccctcaatgaccggacattctaacgtgctgatcaaggtaatcgac
gtgaacgataacgcacccgagattaaggtgacatcaacttccaacaaaatcccggaaaat
tctccaccaggaacattcataacgttcatcgatgttatcgatcgtgattctggagagaac
ggtcaagtccgctgcgagttacccaagaacgttccctttagactccaaacagcatcgaaa
cattatacattggttaccagtgaaacgttggaccgtgaagtgatttctcagtataaatta
ctaatttcggcatgggacttgggatcgccttcactgtcgtcaaataaaaccattcatatt
gcaataaccgatgtaaatgataacgccccgcggttttctgaatcatcctacaacgtatat
gtgatggagaataacgctccgggcgcatccattttcgcagtaacagcactggatcctgat
caggagcagaattcctatatttcttactcttttttggacaattacatccaaaacctacca
gtgtccacttacctgactattaactcaatgaatggtacaatttacatgttgcgtggcgtt
gactatgaggaactcaagcagttccagatccttgtacaagcgcgtgacgctgggttgcct
ccgctaagcagcagcgccacagtgaatgtgatcatcctggatcaaaatgacaacccgccg
gtaattgtttcaccttcagaactaggtggatcagcagcagaggaggttctgccccggtca
gcgggtgaaggttacttggtcaccaagataatggcaactgatgcagattctggtcagaat
gctcggatcttttatcagatgatgaaatctaccgatcccactttgttcaccgttacgaaa
aattcaggtgaaatcagaactgcgcgccgtattttgcagacagatgttcctgtacacact
ctggtcatcttggtgaaggacaatgggcagccaagcctgtccagtacagttacaatgaac
attagagttttggagaacagtactgaaggaatcacggaaagcagcaccttggtgaaaaat
ccgggatatttctcagatccaaatgtttatttaatcatcattttcagttgcacttccgtt
gcctttctgctgatcatcgttctgttgattgggatcaagtgtaaacaggatagaagtatt
atccaagggtataacacccccagttattgttacaatcgtggagatgcgcaagatacgtat
aaaggaagacctgcgatggaggaaactttacgctatcctgggacaggccgggttgtccgc
gtgccggaaccgcatcaatactcggtctgcctgtctccagagtcagcgaaaagtgatttt
ctttttctacagccatacggtgctccgatgtctcaggccgaatgtggtcacaccaccatc
ctgatcgtggttgatagatttagcaagatggctcacttcgtgcctctgcccaagcttccg
tcagccaaggaaattgttgagctcatgttactccacatcttcagactccatggtctcccc
gtcgatgtggtctccaaccggtatctaagagtttgcatcgccatacagatatcggaagcg
agtgcacccggtataggtttccgtctcgcgcgggcggaagatcccgacattggaatcaat
accgtcgccgcctacacgatcagtttcaccgagtattttagtgtaaaaacgcgtagaacc
gagagcgatgttctcataccagagttgctgttgaataagtcactggaccgagagctgcaa
tcttctttacagctcttgcttactgcggcagacggtgggactcctcagaggacagggaca
gctcagattcacattactgtgttcgacattaatgacaacgcgccggtgtttgatcgtgat
atttacaaggtcagcgtaagtgaggacgcaccacatggtaccttggtgatgaaagtcaaa
gcaaatgatttggacgaagggctaaattctgagataacatattctttcgatgatgttgat
ttgcgaagagcgcgtcatttattcagtttagatccagatagtggggaggttcgagttgaa
gggcccttggattttgaagaaacaaacagttattcgctcgatgttcaagctgtggaccgc
ggttcacccgcaatgacaggacattctaacgtgctgatcaaggtcattgacgtgaacgat
aacgcacctgagattaaggtgacatcagcttccaaacaaattccggaaaatgcaccgcca
ggaacattcctaaccttcattgatgttattgaccgggattctggggagaacggtcaggtt
cgctgcgtgttacccaagaatatcccctttagactacagacatcatcgaaccattataaa
ttagttaccagtgacacgttggaccgtgaagggatttctgaatatcgattaccaatttca
gcatgggacctggggtcgccttcattatcctcaaataaaaccatccatattacaataacc
gatgtaaacgataacgccccgcggtttgctgaatcaacctacaacgtgtatgtgatggag
aacaatgcacccggcgcatcgattttcgtactaactgctctagatcctgatctggagcag
aattcctatgtttcttactcttttgtggaccatttcatccaaaatctaccagtgtccact
tacctggtcattaactcaatgaacggtaccatttatgcgttgcgatcctttgactacgag
gaactcaaaaacttccagatccatgtacaagcccgtgacgctggggtgcctccgctgagt
agcagcgccacggtgaatgtgatcgtcctggatcaaaatgacaacgcgccggtaattgtt
tcaccttcagaactaggtgcatcagcagcagaggagggccttccgcgctcagcgggtcaa
ggatatttggtcaccaagataatggcaactgatgcagattctggtcagaatgcacggatc
ttttatcagatggtgaaatctaccgatcccactttgttcaccgttacgaaaaattcaggt
gaaatcagaacagctcgcagtattttgcacacagatgctcctgtacacactctcgtcatc
ttggtgaaggacaatgggcagccaagcctgtccagtacagttacaatgaatgttagagtt
ttggagaacagtactgaaggaatcacggaaagcagcaccttggtgaagaatccgggatat
ttctctgatccaaatgtttatttaatcatcattttcagttgcacttccgttgtctttctt
ctgatcatcgttctgttgattgggatcaagtgtaaacaggacagaagtattatccaaggg
tataactctgccaggtatcgttacaatcgtggagattcgcaagatacgtataaaggaaga
catgcgatggaggaaactttacgctatcctgggactggccgggttgtccgcgtgccggaa
ccgcatcaatattcggtctgcctgtctccagagtcagcgaaaagtgattttctatttttg
cagccatgcggtgctcccatgtctcagacccgaagagaaaggcgggcagtctctgcgttt
tatcgtgttatcaagctacaaaggatacatcccctgtctgtttcgactaggcaattagaa
tatatatgtttctatttcgtggttttgccgtttaatcgaggacaggcctggttttcgata
ttaattgaatgcggaacaatggcgtatttaccgaggtttcctttcaacgtgtttgcattc
atgcttctgatatgtgaacaggatctaatttgcgggcaaattcgttacgctattcccgag
gaaatggagcaaggggcatttgttgggaatattgctcaagatctgggcctgaatgtacgg
caattgtcagctcgcaaattccgactgagctccgatggcggagggcgctacttgaaggtt
agtttggacaatggaatattatctattcgtgaaagaatcgatagggaacgtatctgtagg
caagcagacatctgtaccgtgtcttttaaaacaacactggaaaatccctcggaggtgtac
cgcggggaattagagattcttgatgtcaatgataattcccccgctttcggagaccacagc
atcgtcttacagatatcggaactgagtgcacccggggtacgcttccgtctcgagagggcg
gaagatcccgacaatggaatcaataccgtcgccgcttacacggtcagtttcaccgagtac
tttagtataaaaacacgcagaacagagagcgatgttctcataccagagttgctgttagat
aaacctttggaccgagagctgcaatcttcctttcagctcttgcttactgcgacagacggt
ggcactcctcagagaacaggaacagctcagattcttgtaactgtgttcgacattaatgac
aacgcgccggtgtttgatcgtgatatttacagggtcagcgtaagtgaggacgcgccacat
ggtaccttggtgatgaaagtcaaagcaaatgatttggatgaagggctgaatgctgcgata
acatattcttttagtgatgttgatttgcgaagagcgcgtaatgtattcagtttagatcca
aatagtgggaagattctagttgaagggcccttggattttgaagaaaccatcagttattct
cttgatgttcaagctgtggaccacggttcaccctcaatgacaggacattctaacgtgctg
atcaaggtcattgacgtgaacgataacgcacccgagattaaggtgacatcggcttccaaa
caaattccggaaaatgcaccgcctggtacattcataaccttcattgatgttgtggatcgt
gattctggggagaacggtgaagttcgctgtgagttacccaagaatatcccatttagacta
cagacatcatcgaacctgtataaattggttactagtgaaacattggaccgtgaagggatt
tctgaatatcgattaccaatttcagcatgggacctggggtcgccttcactgtcctcaaat
aaaaccatccatattacaataaccgatgtaaatgataacgctccgcggtttgctgaatca
acctacaaggtatatgtgatggagaacaatgcaccaggcgcatcgattttcgtactaact
gctatagatactgatctggagcagaattcctatgtttcttattctttggtggacaatttc
atccaaaatctaccagtgtccacttacctggcaattaaccccatgaacggtaccatttat
gggttgcgatcctttgactatgaggaactcaaaaacttccagatccatgtacaagcccgg
gacgctggggtgcaaccgttgagtagcagcgccacggtgaatgttatcatcctggatcaa
aatgacaacgcgccggtaattgtttcaccttcatatcagagtcgatcagcagcagaggag
ggcctgccccgctcagcgagtcaagggtatttggtcaccaagataatggcaactgatgca
gactctggtcagaatgcacggatcttttatcagatggtgaaatctaccgatcccactttg
ttcacagttacgagaaactccggtgaaatcagaacagcgcgccgtattttgcagacagat
actcctgtacacactctgatcatcttggtgaaggacaatgggcagccaagcctgtccagt
acagttacaatgaacattagagttttggagaacagtactgaaggaatcacggaaagcagc
accttggtgaaaaatccgggatatttctcagatccaaatgtttatttaatcatcattttc
agttgcacctccgttgtttttcttctcatcatcgttctgctgattgggatcaagtgtaaa
caggacagaagtattatccaagggtataacacccccagttattgttacaatcgtggagat
ttgcacggtacgtttaatggaagacatgcgatggaggaaactttacgctatcctgggaca
ggccgggttgtccgcgtgccggaaccgcatcaatactcggtctgcctgtctccagagtca
gcgaaaagtgattttctcttcttgaagccacgcggcgatcccgactcgggcctaaagtct
caggcgcaatga
DBGET
integrated database retrieval system
